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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R16....'
  2. Transcript 'Cisavi.CG.ENS81.R16....'
  3. Transcript 'Boleac.CG.SB_v3.S739...'
  4. Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.2728303-2733497.16802.t

Possible name(s)

ATP2A1; ATP2A2; ATP2A3

Location

R16 [2,728,353 / 2,732,312]

Sequences

Amino acid sequence

Length: 777

>Cisavi.CG.ENS81.R16.2728303-2733497.16802.p
EVLSYFSVSPTQGLSDEQVKRNRAKYGPNGKSLWQMVVEQFEDLLVRILLLAAIISFVLA
LFEDGEESITAFVEPFVILLILIANSIIGIWQERNAESAIEALKEYEPEMGKVVRQDRSA
VQRILAKNIVPGDIVEVSVGDKVPADIRLIAIHSTTLRVDQAILTGESVSVIKHTDAVPD
PRAVNQDKKNLLFSGTNIASGKATGIVIGTGSNTEIGKIRDQMAETEAEKTPLQQKLDEF
GQQLSKIITVICIAVWAINISHFNDPVHGAIYYFKIAVALAVAAIPEGLPAVITTCLALG
TSRMAKKNSIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRVVMADGAAFHEFKISGS
TYEPIGEVMKNGDTIKSSDYDALIELSTICALCNDSSLDYNEGIYEKVGEATETALTVLC
EKMNVFNTKKEFTLEFSRDRKSMSAYCRPTAPSSIGPKMFVKGAPEGVLDRCTHVRVGKQ
RVPMTAEIKQEIQSLVKEYGTGRDTLRCLALGTIDTPPSPSQMDLGDSTKFLEYETGITF
VGIVGMLDPPRLEVFQAVQDCRKAGIRVIVITGDNKATAEAICRRIGVFGETEDTTGMAY
TGREFDDLSVAEQAKACLRARLFARVEPAHKSKIVEYLQANGDVTAMTGDGVNDAPALKK
AEIGIAMGSGTAVAKSASDMVLADDNFTSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV
CIFLAAALGVPEALIPVQLLWVNLVTDGLPATALSFNPADIDIMDKAPRSTKDSLIN

Nucleotide sequence

Length: 2,359

>Cisavi.CG.ENS81.R16.2728303-2733497.16802.t
GAGGTTCTGAGCTACTTCAGCGTTTCTCCGACTCAAGGTCTCAGTGATGAACAAGTAAAA
AGAAACCGGGCAAAATATGGACCTAACGGGAAATCCCTATGGCAAATGGTTGTTGAGCAG
TTCGAAGATCTTCTTGTGCGAATTCTACTTCTTGCTGCTATCATTTCATTCGTCTTGGCC
TTGTTTGAGGACGGCGAAGAATCAATCACCGCATTTGTTGAACCGTTTGTAATTCTGCTC
ATTCTCATTGCAAATTCTATCATTGGAATCTGGCAGGAACGAAACGCCGAAAGTGCCATC
GAAGCTTTGAAGGAATACGAACCAGAGATGGGAAAAGTTGTTCGACAAGACAGATCAGCT
GTTCAGAGAATCCTTGCTAAAAACATTGTTCCTGGTGACATTGTCGAAGTATCAGTTGGT
GATAAAGTTCCAGCTGATATTCGCCTCATTGCAATCCACTCAACAACACTTCGAGTTGAC
CAAGCTATTCTCACTGGTGAAAGCGTGAGTGTGATCAAACACACTGATGCCGTTCCCGAC
CCTCGAGCTGTCAATCAAGATAAGAAGAATCTGTTATTCTCCGGAACAAACATCGCATCT
GGAAAAGCGACCGGCATTGTAATCGGAACTGGTAGCAACACGGAAATCGGAAAGATCCGA
GATCAAATGGCCGAAACCGAGGCTGAGAAGACACCACTGCAACAAAAACTCGATGAATTC
GGACAACAGCTTTCCAAGATTATCACTGTCATTTGCATTGCTGTGTGGGCAATCAACATC
AGTCACTTCAACGACCCAGTTCACGGAGCAATCTACTACTTTAAAATTGCCGTGGCTTTG
GCTGTTGCTGCCATTCCCGAAGGTTTGCCAGCCGTCATCACAACTTGCTTGGCCCTCGGC
ACCAGCCGAATGGCGAAAAAGAACTCGATCGTTCGAAGTCTTCCATCCGTTGAAACACTT
GGCTGCACCTCCGTTATCTGCTCTGACAAAACCGGAACTCTCACGACCAACCAGATGTCT
GTGTGCAGGGTAGTTATGGCGGACGGAGCAGCTTTCCATGAGTTTAAAATCTCCGGATCA
ACCTACGAACCAATCGGTGAAGTCATGAAGAACGGTGATACAATTAAGAGCAGCGATTAT
GACGCACTGATTGAATTGTCCACTATCTGCGCTCTTTGCAACGATTCGTCCCTCGATTAT
AATGAGGGCATTTACGAAAAAGTTGGAGAAGCAACTGAAACCGCTCTTACTGTACTTTGT
GAAAAGATGAACGTTTTCAACACGAAAAAGGAGTTCACCCTCGAGTTTTCACGAGACCGA
AAATCGATGAGCGCTTACTGTCGACCAACTGCTCCATCATCTATCGGACCCAAGATGTTT
GTCAAAGGAGCACCAGAAGGTGTGCTGGACAGATGCACTCACGTTCGTGTCGGAAAACAA
CGTGTTCCAATGACTGCTGAAATCAAACAAGAAATTCAAAGTTTAGTCAAGGAATATGGC
ACTGGTCGAGATACATTGAGATGTCTTGCCTTAGGAACAATTGATACTCCACCAAGCCCA
AGCCAAATGGATCTCGGAGATTCAACCAAGTTCTTGGAATACGAGACTGGCATCACATTT
GTTGGAATCGTTGGTATGCTCGACCCACCACGATTGGAAGTATTCCAGGCTGTACAAGAT
TGTAGAAAGGCTGGAATCCGTGTCATTGTTATTACTGGAGATAACAAAGCTACAGCTGAA
GCCATCTGCAGACGTATCGGCGTTTTCGGCGAAACTGAGGACACTACCGGAATGGCTTAC
ACTGGACGAGAGTTCGACGACCTCAGTGTAGCTGAACAAGCCAAAGCATGTCTCCGAGCT
CGACTTTTCGCACGAGTGGAACCAGCTCACAAGAGCAAAATTGTTGAATATCTTCAAGCC
AATGGTGATGTTACCGCCATGACCGGTGATGGCGTAAACGATGCTCCAGCTCTGAAAAAA
GCTGAGATTGGAATCGCCATGGGAAGTGGTACCGCCGTCGCTAAAAGCGCATCCGATATG
GTTCTGGCCGATGATAACTTCACATCCATCGTAGCAGCAGTAGAAGAAGGCCGAGCCATC
TATAACAATATGAAGCAGTTCATAAGATACCTCATTTCGTCAAACATTGGTGAAGTCGTC
TGCATCTTCTTGGCTGCTGCTCTCGGAGTTCCCGAAGCTTTGATTCCTGTCCAACTTCTG
TGGGTGAACCTCGTTACTGATGGACTACCTGCTACTGCTCTTAGCTTCAACCCAGCTGAT
ATTGATATTATGGATAAAGCACCCCGATCTACCAAGGACTCTTTGATCAATGGCTGGCTC
ATGATCCGATATTGTGTTG

InterProScan

Pfam
ATPase_P-typ_cation-transptr_N (IPR004014) - T[1-56] 2.2E-12
SUPERFAMILY
ATPase_P-typ_TM_dom_sf (IPR023298) - T[1-109] 2.22E-97 - T[224-321] 2.22E-97 - T[697-777] 2.22E-97
SMART
ATPase_P-typ_cation-transptr_N (IPR004014) - T[1-61] 5.5E-6
TIGRFAM
P-type_ATPase_IIA (IPR005782) - T[37-777] 1.0E-292
TIGRFAM
P_typ_ATPase (IPR001757) - T[77-348] 1.7E-43 - T[616-732] 7.5E-37
SUPERFAMILY
ATPase_P-typ_transduc_dom_A_sf (IPR008250) - T[117-221] 1.14E-27
SUPERFAMILY
HAD-like_sf (IPR036412) - T[325-342] 7.18E-47 - T[473-705] 7.18E-47
Gene3D
HAD_sf (IPR023214) - T[325-336] 0.0 - T[550-685] 0.0
ProSitePatterns
ATPase_P-typ_P_site (IPR018303) - T[329-335] .
SUPERFAMILY
ATPase_P-typ_cyto_dom_N (IPR023299) - T[334-546] 1.44E-59
Gene3D
ATPase_P-typ_cyto_dom_N (IPR023299) - T[337-549] 0.0
Pfam
ATPase_P-typ_cation-transptr_C (IPR006068) - T[731-777] 4.2E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AT2A1_HUMAN 74.146 % 1209 0
AT2A2_HUMAN 72.772 % 1189 0
AT2A3_HUMAN 69.756 % 1146 0