Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R1.6...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.6266221-6281097.20307.t

Possible name(s)

RSL1D1

Gene model

Cisavi.CG.ENS81.R1.6266221-6281097

Location

R1 [6,266,220 / 6,281,097]

Sequences

Amino acid sequence

Length: 337

>Cisavi.CG.ENS81.R1.6266221-6281097.20307.p
MTKKKITAKPKTVENGDPVPAKVAKITPQKEVSSIKESLPIPRDQLESAVEALLKVIKTR
EKSSSLLGNSSKILLTISLHRILSKKRKNIFIKLPNPIYTTASEICVFTKDAGPNSIEKA
TQEFEDLFREKVGFVPKIITFESLRKDYKQYEAQRALCGSYDLFLSDDRVTRLVCRQLSK
VFYSKKKKPWDIRLSAKNLNKQFTKLLALTQWNISGNGDNGIVHFASSSFTVSQICDNLE
QVILAIVNKLPRGWANVRGLRLRTDDSIAIPFYLNNEEATDIDLKDAEEVEYVEKNKKRK
SQGGFLRPKKTLKVSKKRKRPKRETKKETTAAVAAVQ

Nucleotide sequence

Length: 1,378

>Cisavi.CG.ENS81.R1.6266221-6281097.20307.t
ATCTAAAATTAATTTTGTGTCTCGATAAAAAATTCAATTTAGTGCTAATAATGCAAACCT
TATTTCCCCCCTAAAAATGCGACATTACCTGAAAATTAAAGTTAAAGCCACAAAAATTAA
TTGAATTTGTGGAACATAGAGGAATATAAGTGCGGCCTGCGCGACTGGGGTTCAAGTGTT
TTATTCACACATGCACAGTTAGCAACTATCTTGACAGTGAATTTCGTGGAAGGAGAGCAA
TTTTTAGGCAAACTAATTAAGTCAGAGAAGCATATCAGTGTATCAACGTTAAATTATTTG
CATAAAAGATCATTCATCATGACAAAAAAGAAAATCACAGCCAAACCTAAAACTGTAGAG
AACGGAGATCCCGTTCCGGCGAAAGTTGCCAAGATTACTCCACAAAAAGAGGTTTCATCC
ATTAAAGAAAGTTTACCAATTCCCCGTGATCAGTTGGAAAGCGCCGTTGAAGCTTTGTTA
AAAGTTATCAAAACCAGAGAAAAGAGCAGCAGTTTGCTGGGAAATTCATCCAAAATCCTA
CTCACCATTTCACTACATAGAATATTGTCCAAAAAAAGAAAGAATATCTTTATAAAGCTC
CCAAATCCGATCTATACAACTGCTTCCGAAATTTGTGTTTTTACAAAAGACGCAGGGCCA
AACAGCATTGAGAAGGCAACACAGGAATTTGAAGATTTATTCCGTGAAAAAGTTGGATTT
GTACCAAAGATCATCACATTCGAATCCCTGAGGAAAGATTACAAGCAGTACGAGGCTCAA
CGTGCGTTGTGTGGCTCGTACGACTTGTTCTTGTCTGACGACCGTGTCACACGACTGGTG
TGCAGACAGCTTTCGAAAGTCTTCTACAGCAAGAAGAAGAAACCGTGGGACATAAGACTA
TCGGCGAAGAATCTTAACAAGCAGTTTACCAAGCTACTTGCTTTAACACAGTGGAATATA
TCAGGCAATGGAGACAACGGGATCGTTCACTTTGCATCATCATCTTTCACCGTCAGCCAG
ATCTGCGACAACCTTGAGCAAGTTATCCTTGCCATTGTGAACAAATTGCCCAGGGGCTGG
GCAAACGTGCGTGGCTTGCGATTACGAACGGATGACTCGATTGCGATCCCATTTTATTTG
AATAATGAGGAAGCGACGGACATCGATCTGAAAGATGCAGAGGAGGTGGAATATGTGGAG
AAGAACAAGAAGAGAAAATCTCAAGGGGGTTTTCTGCGACCAAAGAAAACTCTAAAAGTT
TCAAAGAAAAGAAAACGACCAAAACGGGAAACTAAAAAAGAAACGACAGCGGCAGTAGCA
GCAGTACAATAATCATTTTCTTTATTGTTATGGTTGTGTGAAATAAAAGAGGTCTTCT

InterProScan

SUPERFAMILY	Ribosomal_L1-like (IPR023674) - T[42-273] 2.22E-30
CDD	Ribosomal_L1/biogenesis (IPR028364) - T[46-271] 1.89303E-25
Pfam	Ribosomal_L1/biogenesis (IPR028364) - T[53-268] 3.9E-42
Gene3D	Ribosomal_L1_3-a/b-sand (IPR016095) - T[102-208] 2.0E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL1D1_HUMAN	33.735 %	137	1.86E-36