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  1. Transcript 'Cisavi.CG.ENS81.R162...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R162.265922-268749.01542.t

Possible name(s)

RPUSD1; RPUSD3; RPUSD4

Location

R162 [265,921 / 268,749]

Sequences

Amino acid sequence

Length: 515

>Cisavi.CG.ENS81.R162.265922-268749.01542.p
MGLNKKVTLIRSLICYQQPRRLFETLSLKLNSLLCENHLTAYNNATLIHKWEFHEKVVKR
GLRYQSIAKPTGEKLEKAKLEELIRRSTDKVKRDTESPAPSTENLSFTIGNVETAPSELN
KNKSKTGMDIAVNIRRQKRSYTEFPLSPTKYDLKQSAIDKLKYVDVCAMTDERLAKLIRR
NVIYADKNLVVFNKPYGLPMHGGDGTKQSVKNVLPMVSKMIFGINTSVPLLLCHRLNKNT
TGITICATNDEIASNIMKSFRMRRVLRKYLAVVVGEPEPHNGVIDMPMCETTLSATKSAR
SHSRMIIKPDMSYDVLTGKESVLKTSRSDGHIAITYYRTIDTSGTLSLVELQPQTSVKHQ
LRVHMSDGLSCPMLGDHKYSRYGSLAPQVLPPKVLKLFNIPHSKTRYMPLHLHLQQVLIP
DVLSDSPRPNMVVGARLPFHFSRTLRILKMKPGVHEGWKGDHRPVKKTTAEPLRKDDVLY
TDPTLSVPTETPRSHSSDDCEKVFRTRIKVKYQKA

Nucleotide sequence

Length: 1,881

>Cisavi.CG.ENS81.R162.265922-268749.01542.t
TGCCTTGAATAGCTTACTGGTAAAAAATTTTATAAATATAATACCAGTTAGCAATTTTGT
AAATTTGTTATTACCAGGTCTGGATCCGTGGTAATGCTTTTTCCTCTTTTTAGTATTCTT
GGTATACAAACAGATGGGTCTAAATAAAAAGGTGACACTTATTCGTTCCCTCATATGTTA
TCAACAACCACGAAGATTATTTGAAACGTTATCTCTGAAATTAAATTCACTTCTTTGTGA
AAACCACTTAACTGCTTACAATAATGCAACATTAATACACAAATGGGAATTCCATGAAAA
GGTCGTTAAGCGTGGATTGAGGTATCAGTCAATCGCTAAACCTACTGGTGAAAAGTTAGA
AAAAGCCAAATTGGAAGAATTGATTCGACGATCAACAGATAAAGTAAAAAGGGACACTGA
AAGCCCAGCACCATCAACAGAGAACCTGAGTTTTACAATTGGCAATGTGGAAACTGCTCC
TTCAGAATTGAATAAAAACAAAAGCAAAACTGGTATGGACATCGCTGTTAATATAAGAAG
ACAAAAAAGAAGTTATACTGAGTTTCCACTTTCACCAACTAAATATGATTTGAAGCAATC
TGCAATAGATAAACTAAAGTATGTTGATGTGTGTGCCATGACAGATGAACGACTTGCGAA
GCTGATTCGAAGGAATGTGATCTACGCAGATAAAAACCTGGTTGTTTTCAACAAGCCATA
TGGACTACCAATGCATGGTGGGGATGGCACAAAGCAGAGCGTGAAGAATGTGTTGCCCAT
GGTCTCAAAAATGATCTTTGGAATAAACACCAGTGTTCCTTTACTCTTATGTCACAGACT
GAATAAGAACACCACTGGTATTACAATATGTGCAACAAATGATGAGATAGCAAGCAACAT
AATGAAATCTTTTCGTATGCGCAGAGTATTAAGGAAATATTTAGCTGTTGTGGTTGGGGA
GCCGGAACCACACAATGGGGTGATAGATATGCCAATGTGTGAGACAACCCTTTCAGCAAC
TAAATCTGCAAGAAGTCATTCGCGCATGATAATAAAACCAGACATGAGTTATGATGTACT
GACTGGGAAAGAATCGGTTTTAAAAACTTCTCGTTCAGATGGTCATATTGCCATTACATA
TTATCGAACAATTGACACTTCAGGAACACTGTCACTGGTAGAGTTACAACCTCAAACATC
TGTCAAGCACCAACTGCGAGTGCATATGTCAGATGGGTTGTCTTGTCCAATGCTTGGTGA
CCACAAGTATTCTCGCTATGGATCTTTAGCACCACAAGTTCTGCCTCCAAAGGTTTTAAA
ATTATTTAACATCCCACATTCAAAGACCAGATACATGCCCCTACATCTGCACCTTCAGCA
AGTACTTATACCAGACGTTTTATCAGATTCTCCAAGACCAAATATGGTGGTGGGTGCTCG
ACTTCCCTTTCATTTTAGCCGAACACTTCGAATTCTTAAAATGAAGCCAGGTGTTCATGA
GGGATGGAAGGGAGATCACCGACCTGTTAAAAAAACAACGGCTGAACCTCTACGGAAAGA
TGATGTGCTATACACTGATCCAACTTTATCTGTACCCACTGAAACCCCTCGTTCTCATTC
CTCAGATGACTGTGAAAAAGTATTCCGGACTCGAATTAAAGTGAAATATCAAAAGGCGTA
AATGTTGGATTTTAAAATGCAATTTATTTCAAGTTGACGAGACAACACAATACAGAAGTT
ATAGATCAAGGAACCCAATAACCATAAAATACCAAGCACATATTGGAATTAATATGATAC
GAAACGTAATGTGAACTTATGAACTTGTTGAATTAATAAAAAACACTGTTTAAAAATAAT
AAATATTGAGTTACACAACAA

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[175-304] 6.37E-40 - T[331-449] 6.37E-40
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[188-366] 1.9E-27
CDD
PsdUridine_synth_RsuA/RluD (IPR006145) - T[189-381] 2.83316E-38

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 42.806 % 233 7.07E-72