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- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15892.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,229 / 2,098,821]
Amino acid sequence
Length: 682
>Cisavi.CG.ENS81.R16.2085720-2098955.15892.p
YSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIKMLE
FALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLRQYLQEV
GYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGNTESIFKDFN
FLNAEDNDNEDDEDVNMQDEDVTDDGDHQRKARAKVSSLFLLLRLYEEMALAEFDFLNPT
AAEPGILLSMTDDMKLDWSVDQNKLNAMKEQFRQEKRQTKKKELKRKYPLSRPEVCPYNL
LNVFHSESLPFTVGGTHMGDESIENALGLGALAGLTVANEADPLSYDIAATKESYRKTWN
PKYTLRSHFDGIRAIRFLPNESAVITASEDHTMKLWNLNKPLPSKKTQSLDVEPIYSFRG
HSGAVLSLEVDADGSYCFSGGLDASVRVWSIPSVEIDAYDTYDPAVIQKVLVGHTDAVWS
LSYSSTRQQLLSASSDCSVRLWNPTSNDPLIQTYTTEGIPTSVCFVQCDSNHAVVSHTDG
KINLYDLETGQISLVLAEGDGSKYIDCSVNCVASHPTMPITMTAHDDKHIKFFDNSSGKL
IHSMVAHLDSVTSLSVDPNGLYLLSGSHDCSIRLWNLDSKTCIQELTSHRKKFDESIYSV
AFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 2,049
>Cisavi.CG.ENS81.R16.2085720-2098955.15892.t
TATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGGTTCGAGATGGAA
CGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCATTTCTACAGGGA
GAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATAAAGATGCTGGAA
TTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGAACAGATTTAAGC
GTCGAACAAAAGCACAATGAATCAAATGATGAGTCAAAAACGAATGAACTTCAAACAACC
AATGCTCATATGTCATGGCGCCATGGGCGACAATTGCTGAGGCAATACCTACAAGAAGTG
GGGTATAGTGAAACAATACTCGACGTACGCTCCCAGCGAGTTCGTGCTCTGCTTGGGAAT
AATTACGACGCTCCAAAACCAGTGGAAAACGACAATCAGGTCGTTAATGGCAACATTTCA
GATGAAGAAAAACAATCGAATACGGATGGGAACACCGAGAGCATCTTCAAGGACTTCAAC
TTCCTCAACGCAGAAGACAATGACAACGAAGATGACGAGGATGTTAACATGCAGGATGAG
GATGTTACTGATGACGGGGATCATCAGAGGAAAGCCAGAGCAAAGGTTTCTTCTTTGTTT
CTATTGTTGAGACTTTATGAGGAAATGGCTCTTGCTGAGTTTGATTTCCTTAATCCAACA
GCCGCTGAACCTGGTATTCTCCTTTCAATGACAGATGATATGAAGCTAGATTGGTCGGTA
GACCAGAACAAACTAAACGCCATGAAGGAACAATTCCGGCAAGAAAAACGCCAGACAAAG
AAGAAAGAATTGAAACGTAAGTATCCACTTTCTAGACCTGAAGTGTGTCCATATAATCTC
CTTAATGTTTTCCATTCAGAATCTCTCCCATTCACGGTCGGTGGAACTCACATGGGAGAT
GAATCGATTGAAAACGCTCTCGGACTTGGAGCATTGGCTGGCCTTACTGTGGCCAATGAA
GCCGACCCACTTTCTTACGATATCGCTGCGACAAAGGAATCATACCGCAAAACCTGGAAT
CCCAAATACACTCTCCGGAGCCATTTCGACGGGATCCGAGCGATTAGGTTCCTCCCAAAC
GAGTCCGCGGTGATCACAGCATCGGAGGATCACACGATGAAGCTCTGGAACCTCAACAAG
CCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGGAGCCGATATATAGCTTCAGAGGA
CACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTGATGGCTCGTATTGCTTCAGTGGT
GGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTAGTGTGGAAATTGATGCTTACGAT
ACTTATGACCCAGCGGTCATCCAGAAAGTGCTGGTCGGTCACACAGACGCAGTGTGGTCG
CTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGGCCTCGTCAGATTGCTCGGTCAGA
CTGTGGAATCCAACATCAAATGATCCACTTATTCAAACCTACACAACCGAAGGAATCCCC
ACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACGCCGTCGTATCCCACACTGATGGG
AAGATCAACCTGTACGACCTGGAAACTGGACAAATTTCCCTCGTGCTTGCTGAAGGAGAT
GGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGGCAAGTCACCCCACGATGCCAATA
ACCATGACAGCTCATGACGACAAACACATTAAATTCTTTGACAACTCGTCAGGCAAATTG
ATCCATTCTATGGTAGCACATCTGGACTCTGTCACCAGTTTATCTGTTGATCCTAATGGT
CTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCCGTTTATGGAACCTGGACAGCAAG
ACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGTTTGATGAATCGATTTACTCGGTT
GCATTTCACCCCAGCGCCACATACATAGCCAGCGCCGGTGCCGACGCTTTAGCAAAGATT
TTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[3-127] 1.2E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[346-458] 6.2E-21 - T[459-563] 9.2E-21 - T[564-682] 6.4E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[357-681] 4.0E-68 |
| SMART |
WD40_repeat (IPR001680) - T[358-397] 8.7E-7 - T[411-450] 1.9E-8 - T[464-503] 3.0E-8 - T[507-546] 0.79 - T[549-594] 4.7 - T[597-636] 4.4E-10 - T[639-682] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[359-397] 2.0E-4 - T[413-450] 3.2E-5 - T[468-503] 3.4E-5 - T[598-636] 1.6E-8 - T[641-680] 0.0059 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[365-399] 13.416 - T[418-451] 13.215 - T[471-512] 13.984 - T[604-645] 15.655 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[365-682] 43.608 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[384-398] . - T[623-637] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[384-398] 6.9E-6 - T[490-504] 6.9E-6 - T[623-637] 6.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 52.156 % | 714 | 0 |
| STRN_HUMAN | 50.877 % | 683 | 0 |
| STRN4_HUMAN | 53.889 % | 409 | 4.58E-133 |