- Transcript 'KH2012:KH.C5.346.v1....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15887.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,217 / 2,098,955]
Amino acid sequence
Length: 631
>Cisavi.CG.ENS81.R16.2085720-2098955.15887.p
TKSPYSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRI
KMLEFALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLRQY
LQEVGYSETILDVRSQRVRALLGNNYDAPKPDFNFLNAEDNDNEDDEDDAFDEVDGFGDE
EMALAEFDFLNPTAAEPDDMKLDWSVDQNKLNAMKEQFRQEKRQTKKKELKRKYPLSRPE
KDLQSMLDTLRGSEMSRATEESSKYNQKQQKTSLNTQVLNLQQLIFKIWLSVTEFSTMDF
QIAATKESYRKTWNPKYTLRSHFDGIRAIRFLPNESAVITASEDHTMKLWNLNKPLPSKK
TQSLDVEPIYSFRGHSGAVLSLEVDADGSYCFSGGLDASVRVWSIPSVEIDAYDTYDPAV
IQKVLVGHTDAVWSLSYSSTRQQLLSASSDCSVRLWNPTSNDPLIQTYTTEGIPTSVCFV
QCDSNHAVVSHTDGKINLYDLETGQISLVLAEGDGSSVNCVASHPTMPITMTAHDDKHIK
FFDNSSGKLIHSMVAHLDSVTSLSVDPNGLYLLSGSHDCSIRLWNLDSKTCIQELTSHRK
KFDESIYSVAFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 2,030
>Cisavi.CG.ENS81.R16.2085720-2098955.15887.t
ACGAAATCCCCGTATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGG
TTCGAGATGGAACGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCA
TTTCTACAGGGAGAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATA
AAGATGCTGGAATTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGA
ACAGATTTAAGCGTCGAACAAAAGCACAATGAATCAAATGATGAGTCAAAAACGAATGAA
CTTCAAACAACCAATGCTCATATGTCATGGCGCCATGGGCGACAATTGCTGAGGCAATAC
CTACAAGAAGTGGGGTATAGTGAAACAATACTCGACGTACGCTCCCAGCGAGTTCGTGCT
CTGCTTGGGAATAATTACGACGCTCCAAAACCAGACTTCAACTTCCTCAACGCAGAAGAC
AATGACAACGAAGATGACGAGGATGATGCATTTGATGAGGTGGATGGGTTTGGAGATGAG
GAAATGGCTCTTGCTGAGTTTGATTTCCTTAATCCAACAGCCGCTGAACCTGATGATATG
AAGCTAGATTGGTCGGTAGACCAGAACAAACTAAACGCCATGAAGGAACAATTCCGGCAA
GAAAAACGCCAGACAAAGAAGAAAGAATTGAAACGTAAGTATCCACTTTCTAGACCTGAA
AAAGATCTGCAGAGCATGTTGGACACACTGAGAGGATCAGAGATGTCCCGGGCAACAGAG
GAGTCCTCCAAGTATAACCAAAAACAACAAAAAACTTCTCTAAACACGCAAGTTCTCAAC
TTACAACAATTAATTTTTAAAATTTGGTTATCAGTTACTGAATTCTCAACTATGGATTTC
CAGATCGCTGCGACAAAGGAATCATACCGCAAAACCTGGAATCCCAAATACACTCTCCGG
AGCCATTTCGACGGGATCCGAGCGATTAGGTTCCTCCCAAACGAGTCCGCGGTGATCACA
GCATCGGAGGATCACACGATGAAGCTCTGGAACCTCAACAAGCCGCTTCCGAGCAAGAAG
ACCCAGTCGCTAGATGTGGAGCCGATATATAGCTTCAGAGGACACTCTGGTGCAGTTCTC
AGTCTTGAAGTGGATGCTGATGGCTCGTATTGCTTCAGTGGTGGGTTGGATGCCAGCGTT
CGTGTGTGGTCCATACCTAGTGTGGAAATTGATGCTTACGATACTTATGACCCAGCGGTC
ATCCAGAAAGTGCTGGTCGGTCACACAGACGCAGTGTGGTCGCTCTCGTACTCCAGCACT
CGTCAACAATTGTTGTCGGCCTCGTCAGATTGCTCGGTCAGACTGTGGAATCCAACATCA
AATGATCCACTTATTCAAACCTACACAACCGAAGGAATCCCCACATCAGTGTGCTTCGTC
CAGTGTGATTCCAACCACGCCGTCGTATCCCACACTGATGGGAAGATCAACCTGTACGAC
CTGGAAACTGGACAAATTTCCCTCGTGCTTGCTGAAGGAGATGGAAGCAGTGTCAACTGC
GTGGCAAGTCACCCCACGATGCCAATAACCATGACAGCTCATGACGACAAACACATTAAA
TTCTTTGACAACTCGTCAGGCAAATTGATCCATTCTATGGTAGCACATCTGGACTCTGTC
ACCAGTTTATCTGTTGATCCTAATGGTCTTTACCTGCTTTCTGGAAGCCATGACTGTTCG
ATCCGTTTATGGAACCTGGACAGCAAGACTTGTATACAAGAGCTCACTTCGCATAGGAAA
AAGTTTGATGAATCGATTTACTCGGTTGCATTTCACCCCAGCGCCACATACATAGCCAGC
GCCGGTGCCGACGCTTTAGCAAAGATTTTTGTATAGTTATCAAGAAATTCCAACTCGTAT
GTGATAGGAATCCCGAACAGTGGTACTAAAAGATGCCTCTTCGTGATTCCAGCTCACAAA
TCGTGATTTTAATCACGTGAGTGCATAAGATCCTCTTGGGACTTGCGCAC
| Pfam |
Striatin_N (IPR013258) - T[7-131] 1.1E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[204-409] 2.1E-20 - T[410-514] 1.9E-20 - T[515-630] 4.0E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[311-630] 1.12E-69 |
| SMART |
WD40_repeat (IPR001680) - T[312-351] 8.7E-7 - T[365-404] 1.9E-8 - T[418-457] 3.0E-8 - T[461-500] 0.79 - T[503-543] 0.4 - T[546-585] 4.4E-10 - T[588-631] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[313-351] 1.8E-4 - T[367-404] 2.9E-5 - T[422-457] 3.1E-5 - T[547-585] 1.4E-8 - T[590-629] 0.0054 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[319-631] 46.798 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[319-353] 13.416 - T[372-405] 13.215 - T[425-466] 13.984 - T[553-594] 15.655 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[338-352] 5.6E-6 - T[444-458] 5.6E-6 - T[572-586] 5.6E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[338-352] . - T[572-586] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 48.108 % | 663 | 0 |
| STRN_HUMAN | 47.059 % | 442 | 2.52E-146 |
| STRN4_HUMAN | 53.143 % | 402 | 7.19E-131 |