- Molecular Tool 'Su(H)DBM' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15886.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,085,788 / 2,098,821]
Amino acid sequence
Length: 712
>Cisavi.CG.ENS81.R16.2085720-2098955.15886.p
KSPYSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIK
MLEFALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLRQYL
QEVGYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGNTESIFK
DFNFLNAEDNDNEDDEDVNMQDEDVTDDGDHQRKARAKVDGFGDEEMALAEFDFLNPTAA
EPGILLSMTDDMKLDWSVDQNKLNAMKEQFRQEKRQTKKKELKRPIKKDLQSMLDTLRGS
EMLPSVMGNVYIVQEVRSLSMHVPDHPYNLLNVFHSESLPFTVGGTHMGDESIENALGLG
ALAGLTVANEADPLSYDIAATKESYRKTWNPKYTLRSHFDGIRAIRFLPNESAVITASED
HTMKLWNLNKPLPSKKTQSLDVEPIYSFRGHSGAVLSLEVDADGSYCFSGGLDASVRVWS
IPSVEIDAYDTYDPAVIQKVLVGHTDAVWSLSYSSTRQQLLSASSDCSVRLWNPTSNDPL
IQTYTTEGIPTSVCFVQCDSNHAVVSHTDGKINLYDLETGQISLVLAEGDGSKYIDCSVN
CVASHPTMPITMTAHDDKHIKFFDNSSGKLIHSMVAHLDSVTSLSVDPNGLYLLSGSHDC
SIRLWNLDSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 2,207
>Cisavi.CG.ENS81.R16.2085720-2098955.15886.t
TTTCAATGATGGATTTAGAAAATGGCGATGCTGGTGGGAACAACCAAGCAAATGAACCTG
GAGAGACGAAATCCCCGTATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGT
CGAGGTTCGAGATGGAACGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAA
TTGCATTTCTACAGGGAGAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAA
GAATAAAGATGCTGGAATTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAAT
TCGGAACAGATTTAAGCGTCGAACAAAAGCACAATGAATCAAATGATGAGTCAAAAACGA
ATGAACTTCAAACAACCAATGCTCATATGTCATGGCGCCATGGGCGACAATTGCTGAGGC
AATACCTACAAGAAGTGGGGTATAGTGAAACAATACTCGACGTACGCTCCCAGCGAGTTC
GTGCTCTGCTTGGGAATAATTACGACGCTCCAAAACCAGTGGAAAACGACAATCAGGTCG
TTAATGGCAACATTTCAGATGAAGAAAAACAATCGAATACGGATGGGAACACCGAGAGCA
TCTTCAAGGACTTCAACTTCCTCAACGCAGAAGACAATGACAACGAAGATGACGAGGATG
TTAACATGCAGGATGAGGATGTTACTGATGACGGGGATCATCAGAGGAAAGCCAGAGCAA
AGGTGGATGGGTTTGGAGATGAGGAAATGGCTCTTGCTGAGTTTGATTTCCTTAATCCAA
CAGCCGCTGAACCTGGTATTCTCCTTTCAATGACAGATGATATGAAGCTAGATTGGTCGG
TAGACCAGAACAAACTAAACGCCATGAAGGAACAATTCCGGCAAGAAAAACGCCAGACAA
AGAAGAAAGAATTGAAACGTCCAATAAAGAAAGATCTGCAGAGCATGTTGGACACACTGA
GAGGATCAGAGATGCTTCCTTCAGTTATGGGCAACGTATATATTGTGCAAGAAGTAAGAA
GTCTATCTATGCATGTGCCAGACCATCCATATAATCTCCTTAATGTTTTCCATTCAGAAT
CTCTCCCATTCACGGTCGGTGGAACTCACATGGGAGATGAATCGATTGAAAACGCTCTCG
GACTTGGAGCATTGGCTGGCCTTACTGTGGCCAATGAAGCCGACCCACTTTCTTACGATA
TCGCTGCGACAAAGGAATCATACCGCAAAACCTGGAATCCCAAATACACTCTCCGGAGCC
ATTTCGACGGGATCCGAGCGATTAGGTTCCTCCCAAACGAGTCCGCGGTGATCACAGCAT
CGGAGGATCACACGATGAAGCTCTGGAACCTCAACAAGCCGCTTCCGAGCAAGAAGACCC
AGTCGCTAGATGTGGAGCCGATATATAGCTTCAGAGGACACTCTGGTGCAGTTCTCAGTC
TTGAAGTGGATGCTGATGGCTCGTATTGCTTCAGTGGTGGGTTGGATGCCAGCGTTCGTG
TGTGGTCCATACCTAGTGTGGAAATTGATGCTTACGATACTTATGACCCAGCGGTCATCC
AGAAAGTGCTGGTCGGTCACACAGACGCAGTGTGGTCGCTCTCGTACTCCAGCACTCGTC
AACAATTGTTGTCGGCCTCGTCAGATTGCTCGGTCAGACTGTGGAATCCAACATCAAATG
ATCCACTTATTCAAACCTACACAACCGAAGGAATCCCCACATCAGTGTGCTTCGTCCAGT
GTGATTCCAACCACGCCGTCGTATCCCACACTGATGGGAAGATCAACCTGTACGACCTGG
AAACTGGACAAATTTCCCTCGTGCTTGCTGAAGGAGATGGAAGTAAGTACATTGACTGCA
GTGTCAACTGCGTGGCAAGTCACCCCACGATGCCAATAACCATGACAGCTCATGACGACA
AACACATTAAATTCTTTGACAACTCGTCAGGCAAATTGATCCATTCTATGGTAGCACATC
TGGACTCTGTCACCAGTTTATCTGTTGATCCTAATGGTCTTTACCTGCTTTCTGGAAGCC
ATGACTGTTCGATCCGTTTATGGAACCTGGACAGCAAGACTTGTATACAAGAGCTCACTT
CGCATAGGAAAAAGTTTGATGAATCGATTTACTCGGTTGCATTTCACCCCAGCGCCACAT
ACATAGCCAGCGCCGGTGCCGACGCTTTAGCAAAGATTTTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[6-130] 1.4E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[376-489] 5.9E-21 - T[490-594] 1.2E-20 - T[595-712] 6.8E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[387-711] 4.5E-68 |
| SMART |
WD40_repeat (IPR001680) - T[388-427] 8.7E-7 - T[441-480] 1.9E-8 - T[494-533] 3.0E-8 - T[537-576] 0.79 - T[579-624] 4.7 - T[627-666] 4.4E-10 - T[669-712] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[389-427] 2.1E-4 - T[443-480] 3.4E-5 - T[498-533] 3.6E-5 - T[628-666] 1.7E-8 - T[671-710] 0.0063 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[395-712] 43.608 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[395-429] 13.416 - T[448-481] 13.215 - T[501-542] 13.984 - T[634-675] 15.655 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[414-428] 7.7E-6 - T[520-534] 7.7E-6 - T[653-667] 7.7E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[414-428] . - T[653-667] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 53.075 % | 734 | 0 |
| STRN_HUMAN | 52.233 % | 721 | 0 |
| STRN4_HUMAN | 53.889 % | 409 | 1.11E-132 |