- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1473434-1481523.12531.t
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
R16 [1,474,212 / 1,481,510]
Amino acid sequence
Length: 495
>Cisavi.CG.ENS81.R16.1473434-1481523.12531.p
MQIFVKTLTGKTITLEVEASDSIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKSKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSID
NVKTKIQDKEGKYTK
Nucleotide sequence
Length: 1,706
>Cisavi.CG.ENS81.R16.1473434-1481523.12531.t
TTTTCGTGAAAACCTTGACTGGAAAGACCATCACCCTAGAGGTTGAGGCATCAGACTCCA
TCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAGCAACGTC
TTATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGA
AAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAA
CCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCTGACTCCATCGACAATGTTA
AGACAAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAGCAACGTCTCATCTTCGCTG
GAAAACAACTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCACTC
TTCACTTGGTACTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAA
AGACCATCACCCTTGAGGTTGAGGCATCCGACTCCATCGACAATGTTAAGACAAAGATCC
AAGACAAAGAAGGAATCCCTCCCGATCAGCAACGTCTCATCTTTGCTGGAAAACAACTTG
AAGATGGCCGCACATTGAGCGACTACAACATTCAAAAAGAGTCCACTCTTCACTTGGTCC
TTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCC
TTGAGGTTGAGGCATCCGACTCCATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAG
GAATTCCTCCGGATCAGCAACGTCTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGCA
CATTGAGCGACTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAG
GAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGG
CATCTGACTCCATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCCG
ATCAGCAACGTCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACATTGAGCGACT
ACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAA
TCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCCGACTCCA
TCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAGCAACGTC
TCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGA
AAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAA
CCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCCGACTCTATCGACAATGTTA
AGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAGCAACGTCTTATCTTCGCTG
GAAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCACTC
TTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAA
AGACCATCACCCTTGAGGTTGAGGCATCTGACTCCATCGACAATGTCAAGACAAAGATCC
AAGACAAAGAAGGTAAATATACCAAA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 2.12E-32 - T[76-152] 6.35E-33 - T[151-228] 5.5E-33 - T[227-304] 5.5E-33 - T[304-380] 1.02E-32 - T[380-456] 9.94E-33 - T[456-491] 5.76E-9 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.125 - T[77-152] 30.125 - T[153-228] 30.169 - T[229-304] 30.169 - T[305-380] 30.169 - T[381-456] 30.169 - T[457-491] 10.266 |
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 5.4E-34 - T[77-148] 5.4E-34 - T[153-224] 4.9E-34 - T[229-300] 4.9E-34 - T[305-376] 4.9E-34 - T[381-452] 4.9E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 8.8E-32 - T[79-150] 8.8E-32 - T[155-226] 6.2E-32 - T[231-302] 6.2E-32 - T[307-378] 6.2E-32 - T[383-454] 6.2E-32 - T[459-491] 5.4E-8 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . - T[255-280] . - T[331-356] . - T[407-432] . |
| PRINTS |
Ubiquitin (IPR019956) - T[163-183] 8.9E-37 - T[184-204] 8.9E-37 - T[205-226] 8.9E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 93.506 % | 151 | 4.32E-44 |
| UBB_HUMAN | 94.323 % | 436 | 1.47E-153 |
| UBC_HUMAN | 94.297 % | 923 | 0 |