Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00001427' > 
  2. Transcript 'KH2012:KH.L20.1.v1.R...' > 
  3. Region 'REG00000099' > 
  4. Transcript 'KH2012:KH.C2.725.v1....' > 
  5. Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.126965-135459.07886.t

Possible name(s)

FOXA1; FOXA2; FOXA3

Gene model

Cisavi.CG.ENS81.R16.126965-135459

Location

R16 [126,967 / 128,623]

Sequences

Amino acid sequence

Length: 400

>Cisavi.CG.ENS81.R16.126965-135459.07886.p
MLSSPPSKYQPFQQSYATGMNNMANGMQPSYVNPMNTMSLTAAGNQFNQALPQGYGGMSL
NGMGSGAMSGHSPHSVQMAAAAAAAVGSPPMGSAYAGMGPGVGITPNMALMLNRRTEKAY
RRNYTHAKPPYSYISLITMALQSSPNKMMTLSEIYNWIMDLFPFYRQNQQRWQNSIRHSL
SFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSDKKSKGAGPSSEEH
SPLENIPNDAKSDDRAHHNAPHSMNQEHHLVSHEQDPHHLYSHYAQATAYAAAVQHNSFA
AVAAAHSFAPHPFSISSLMNVTDHQQQHYQQHPHHQTYTPAKDLRAYQDAVQYYNNGMNS
LTGSPVNSASSSSVSTPSPSSSSSTSHYSNGLHYPLHHSQ

Nucleotide sequence

Length: 1,200

>Cisavi.CG.ENS81.R16.126965-135459.07886.t
ATGTTGTCCTCCCCACCGTCAAAGTACCAACCATTCCAACAGTCATATGCTACTGGCATG
AACAACATGGCGAACGGGATGCAACCGTCTTATGTCAACCCAATGAACACTATGTCGCTC
ACAGCTGCTGGAAATCAATTTAACCAAGCATTACCACAAGGTTATGGCGGTATGTCCCTG
AATGGAATGGGGTCTGGTGCAATGAGTGGACATTCGCCTCATAGCGTACAAATGGCGGCG
GCCGCGGCAGCTGCAGTCGGATCCCCGCCGATGGGTTCTGCGTACGCGGGAATGGGCCCG
GGCGTTGGAATCACTCCGAATATGGCGCTCATGTTGAACAGAAGAACAGAGAAAGCGTAC
AGAAGAAACTACACCCATGCCAAGCCACCGTATAGTTATATCTCACTGATTACTATGGCT
TTGCAGTCATCGCCAAACAAAATGATGACTTTGAGTGAAATCTACAATTGGATCATGGAT
CTTTTCCCATTCTACCGTCAGAACCAACAAAGATGGCAGAACTCGATCAGACACAGTTTG
TCATTCAACGATTGCTTCGTTAAAGTTCCAAGATCTGCGGATAAACCAGGCAAAGGTTCA
TACTGGTCACTACACCCCGACGCTGGAAATATGTTCGAAAATGGCTGCTACCTGAGAAGA
CAAAAGCGGTTCAAGAGCGACAAGAAATCTAAGGGGGCGGGACCGAGTTCAGAAGAACAT
TCCCCACTAGAAAACATTCCAAATGATGCAAAAAGCGACGACAGGGCCCACCATAATGCG
CCACACTCAATGAACCAAGAACATCACTTGGTATCGCACGAACAAGACCCACATCACTTG
TACTCCCATTACGCCCAAGCAACTGCGTATGCTGCCGCTGTACAACATAACTCATTTGCA
GCTGTAGCCGCCGCTCATTCGTTTGCACCTCATCCATTTTCAATAAGCAGCCTCATGAAC
GTTACCGATCACCAGCAGCAACATTACCAGCAACACCCTCACCACCAAACCTATACACCA
GCAAAGGATTTGAGGGCATATCAAGATGCGGTGCAATATTACAACAACGGCATGAACTCT
CTCACCGGTTCGCCTGTTAACTCAGCATCGTCGTCGTCAGTTTCAACACCGTCACCGTCA
TCGTCTTCCTCTACGTCACATTACTCCAATGGCCTCCACTACCCGTTGCATCACAGCCAG

InterProScan

Pfam
Fork-head_N (IPR013638) - T[7-127] 2.3E-16
SMART
Fork_head_dom (IPR001766) - T[126-216] 6.1E-61
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[126-227] 2.7E-47
ProSitePatterns
TF_fork_head_CS_1 (IPR018122) - T[128-141] .
PRINTS
Fork_head_dom (IPR001766) - T[128-141] 1.1E-23 - T[149-166] 1.1E-23 - T[172-189] 1.1E-23
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[128-222] 1.41E-40
Pfam
Fork_head_dom (IPR001766) - T[128-212] 2.1E-38
ProSiteProfiles
Fork_head_dom (IPR001766) - T[128-222] 39.348
CDD
Fork_head_dom (IPR001766) - T[128-205] 2.79169E-50
ProSitePatterns
TF_fork_head_CS_2 (IPR030456) - T[172-178] .
Pfam
Forkhead_box_C (IPR018533) - T[311-389] 3.4E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FOXA3_HUMAN 75.397 % 217 1.83E-67
FOXA2_HUMAN 86.087 % 233 2.45E-72
FOXA1_HUMAN 56.281 % 224 1.28E-68