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TRANSCRIPT CARD

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  1. EST 'FF948519.1' > 
  2. Transcript 'Cisavi.CG.ENS81.R76....' > 
  3. Transcript 'KH2012:KH.L55.3.v1.A...' > 
  4. Clone 'citb060n13' > 
  5. Transcript 'Cisavi.CG.ENS81.R15....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R15.936673-942797.11065.t

Possible name(s)

COPS7B; EIF3M; PSMD13

Gene model

Cisavi.CG.ENS81.R15.936673-942797

Location

R15 [936,672 / 942,736]

Sequences

Amino acid sequence

Length: 372

>Cisavi.CG.ENS81.R15.936673-942797.11065.p
MSVPAFIDLTETDQIAELQQYLKSRDIKVVEEGELFNDVKQLIISTAEIWKDTDGKDIEG
VVNSILSLLFVIPIAQGSELVDLLCEQLFVGAENGKAPVSLNLLHNLFHGYPSKTAFLYK
VYCTWLKVAKISRSIHLVPTNLKELTSWLESWDVGEEGKQNVLRLLYEAQMTCGRNKDAS
PTMVALLQSYTEDNASKAREDAIRCITKALADPNTYLFNELLTLKPITFLEGELLHDLLN
IFVSGNIKEYDEFYKANKDFVESIGLSHASNTRKMRLLSLVDTLGSAREITFRDIETRLD
IPEAEVEAFIIDAIQSKLVRGRIDHVNSKVIVSQSCQRTFGRAQWEELATRLGQWRDNIN
QVFSRLLSLSHM

Nucleotide sequence

Length: 1,189

>Cisavi.CG.ENS81.R15.936673-942797.11065.t
TGAGCCATATGTTGTTCATTTAGGTGTAAAACTATAGTATCACTAATTTAACAAGTTTCC
AAGCAAGTACAAGATGAGCGTCCCTGCATTCATTGACCTAACAGAGACTGATCAGATAGC
GGAGTTGCAGCAATACTTAAAAAGCCGAGATATCAAAGTGGTGGAGGAAGGAGAATTGTT
CAATGATGTTAAACAATTAATTATTTCTACGGCAGAAATTTGGAAAGATACTGATGGAAA
AGATATTGAAGGAGTTGTGAACAGCATCTTGTCCTTGTTATTCGTCATTCCGATTGCCCA
AGGTTCTGAGCTTGTTGACCTTTTATGTGAGCAGTTGTTCGTTGGCGCCGAAAACGGAAA
AGCTCCAGTCAGTTTAAATCTGTTGCACAACCTCTTCCATGGGTATCCGTCGAAAACTGC
ATTCCTTTACAAAGTCTATTGTACTTGGTTGAAAGTTGCTAAAATCAGTAGAAGCATTCA
CCTGGTTCCAACTAATTTAAAAGAGTTGACATCATGGCTGGAGTCATGGGATGTGGGTGA
GGAGGGAAAACAGAATGTGTTGCGGCTCCTCTACGAAGCTCAGATGACGTGTGGAAGGAA
CAAGGATGCCTCTCCTACCATGGTTGCTCTGCTACAGTCCTACACCGAGGATAATGCATC
CAAAGCAAGGGAAGATGCAATAAGGTGCATCACAAAAGCTCTGGCAGATCCAAACACGTA
CTTATTTAATGAACTCTTAACTTTGAAACCTATTACATTCTTAGAGGGAGAGCTTTTACA
TGATCTGCTTAATATATTCGTGAGCGGGAACATTAAGGAATACGATGAGTTTTATAAAGC
GAACAAAGACTTCGTTGAATCCATAGGTTTATCGCATGCCAGTAATACTCGTAAGATGCG
GCTTCTATCATTGGTTGATACGTTGGGTTCGGCACGAGAAATAACATTCCGGGACATCGA
AACTAGACTGGATATACCCGAAGCTGAAGTAGAAGCGTTTATAATCGATGCTATTCAAAG
CAAATTGGTCCGTGGACGAATAGACCACGTCAATAGCAAAGTTATCGTCAGTCAATCATG
TCAGAGAACATTCGGCCGAGCACAATGGGAAGAGCTAGCGACGCGTCTCGGGCAGTGGCG
TGACAACATCAATCAAGTATTCTCAAGGTTATTGAGTCTATCGCACATG

InterProScan

Hamap
eIF3m (IPR027528) - T[1-372] 22.473
Pfam
PCI_dom (IPR000717) - T[235-333] 2.3E-16
SMART
PCI_dom (IPR000717) - T[266-355] 2.0E-13
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[273-334] 5.85E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 47.453 % 350 1.11E-119