- Clone 'AHC0AAA61YM23' >
- Transcript 'Cisavi.CG.ENS81.R1.5...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.5792681-5806008.20207.t
Possible name(s)
COMP; THBS3; THBS4
Gene model
Location
R1 [5,793,471 / 5,802,338]
Amino acid sequence
Length: 706
>Cisavi.CG.ENS81.R1.5792681-5806008.20207.p
QILEARELRRAIQQCSLCTPCSNIELKANCSEDPCYPGVECVDIDAGFECGTCPLGYQGN
GSNCTDIDECLNNPCSTQCMNTPGSYHCDPCPTGYDETIQDVNVDGLIIPTQICSDYNEC
DVDNGGCVKFSICHNFPVSFGYAGNGFICGNDTDQDSFPDMRMPCHKKHCRKVRNLRILD
NCPQVPNSGQEDSDNDGFGDACDDDADNDGVPNHEDNCVLVANADQQNSDTDSFGDACDN
CPNVSNPKQHDTDGNGEGDKCDNDIDGDGKSLNYVSNTKFLCSHAFFTPLKYELTFTLLV
YLTGISNNVDNCPYTPNYNQEDRDLDKIGDACDNCLSMSNSLQTDTDNDLLGDMCDDDAD
ADGDGYQNSIDNCPYVINNAQLDTDNDGIGDACDEDDDNDGIPDYGINTGSDNCRLVYNP
NQLDRDEDGVGDACEDDKDGDQVNDWRDACPENAEVTTTDFRTFQSVTLDPKGDAQVDPH
WVILNKGMEIVQTQNSDPGLAIGYDSFDGVDFSGTFFVNTATDDDYAGFIFSYQSSSRFY
VVTWKQTEQTYWSATPFRAVAQPGLQLKAVNSNKGPGERMRNALWHSSDTMGEVKVLWSD
PINQGWEDMTSYRWELQHRPQVGYIRSQTCASPSFREIPIFLLYLIYHIYLPLFTPCRIR
FFRQSQLIADTGSVLDNTVKGGRLGVFCFSQENVIWSNLVYRCNGE
Nucleotide sequence
Length: 2,118
>Cisavi.CG.ENS81.R1.5792681-5806008.20207.t
CAGATATTAGAAGCCAGGGAACTCAGGAGAGCAATTCAACAATGTTCATTGTGTACTCCA
TGCAGTAATATTGAGTTAAAAGCAAACTGTTCTGAGGATCCATGTTATCCAGGGGTTGAG
TGTGTTGACATTGATGCTGGATTTGAGTGTGGGACGTGTCCACTGGGTTATCAAGGCAAT
GGAAGCAACTGTACTGACATCGATGAGTGTTTGAACAATCCCTGTTCGACTCAATGCATG
AATACACCGGGTAGTTACCATTGTGACCCATGTCCAACCGGTTATGACGAAACGATACAG
GATGTCAATGTAGATGGCTTGATTATACCAACACAGATATGTAGCGACTACAACGAATGT
GATGTGGACAATGGTGGCTGCGTCAAATTCTCTATCTGTCATAATTTTCCTGTAAGTTTC
GGCTACGCCGGGAATGGATTCATTTGCGGCAACGACACTGACCAGGACAGCTTCCCGGAC
ATGCGGATGCCATGTCATAAGAAGCATTGCAGAAAGGTTAGAAATCTGAGAATTCTTGAT
AACTGCCCTCAAGTCCCAAACAGTGGGCAAGAAGACTCTGACAACGATGGGTTTGGGGAT
GCATGTGATGACGACGCCGATAACGATGGAGTCCCCAACCACGAGGATAACTGTGTGTTG
GTGGCCAACGCAGACCAACAGAATTCCGACACTGATTCGTTCGGAGACGCGTGCGATAAC
TGCCCCAATGTTTCGAACCCCAAACAACACGACACGGATGGGAACGGTGAAGGCGACAAG
TGCGACAATGACATTGACGGAGATGGTAAGTCATTAAATTACGTTTCAAATACTAAGTTT
TTATGCTCTCATGCATTCTTTACCCCCTTAAAATATGAATTAACTTTTACATTGCTTGTC
TATCTCACCGGAATATCGAACAACGTCGATAACTGCCCCTACACTCCCAACTACAATCAG
GAAGATCGGGATTTGGACAAAATCGGCGACGCTTGCGACAATTGTTTGAGTATGAGCAAC
TCATTGCAGACGGACACAGACAACGATCTCTTGGGAGACATGTGCGATGATGACGCTGAT
GCCGATGGTGACGGGTACCAGAATAGCATCGATAACTGCCCCTACGTCATCAACAATGCT
CAACTAGATACGGACAACGACGGAATAGGAGACGCATGCGACGAGGATGACGACAACGAT
GGAATTCCCGACTACGGCATCAACACAGGCTCGGATAATTGCCGATTGGTATACAATCCG
AATCAACTCGACCGTGACGAAGATGGAGTCGGTGATGCGTGCGAAGATGACAAAGACGGG
GACCAGGTGAACGATTGGCGCGACGCGTGCCCGGAAAATGCCGAGGTGACCACCACGGAC
TTCAGGACCTTCCAAAGTGTGACGTTGGACCCTAAGGGTGACGCCCAGGTGGATCCCCAT
TGGGTGATCCTTAACAAGGGAATGGAGATCGTGCAAACACAAAACAGTGATCCGGGATTA
GCCATCGGTTACGATTCATTTGACGGGGTCGATTTCAGTGGAACGTTCTTTGTGAACACC
GCCACTGATGATGATTACGCTGGATTCATCTTCAGTTACCAGAGCAGCTCTCGATTTTAC
GTGGTCACGTGGAAGCAGACGGAGCAAACTTACTGGAGCGCAACTCCCTTCCGCGCTGTG
GCGCAACCGGGATTGCAGTTAAAGGCTGTCAACTCAAACAAAGGTCCTGGAGAACGGATG
CGGAACGCTCTATGGCATTCCTCCGACACTATGGGTGAGGTCAAAGTCCTGTGGAGTGAC
CCCATAAACCAGGGTTGGGAGGATATGACGTCATACAGATGGGAACTGCAGCATAGACCC
CAAGTTGGATACATTAGGTCGCAAACTTGCGCTTCCCCATCCTTTCGGGAAATACCCATT
TTTCTCCTGTACCTTATCTACCATATCTACCTACCATTATTTACCCCTTGCAGAATCCGA
TTTTTTCGGCAGTCGCAATTGATAGCTGACACCGGATCAGTGTTGGACAATACAGTCAAA
GGTGGTCGACTTGGTGTATTTTGCTTCAGTCAAGAAAATGTCATTTGGTCGAATTTGGTG
TACCGTTGCAACGGTGAG
| PANTHER |
Thrombospondin (IPR037349) - T[15-139] 1.4E-272 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[27-65] 0.014 - T[66-115] 6.7E-7 |
| SMART |
EGF-like_dom (IPR000742) - T[29-65] 0.02 - T[69-115] 0.66 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[66-88] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[66-96] 1.8E-6 |
| Gene3D |
TSP_type-3_rpt (IPR028974) - T[81-238] 9.3E-20 - T[239-278] 6.4E-8 - T[302-333] 6.0E-8 - T[334-459] 5.4E-41 |
| ProSiteProfiles |
Thrombospondin_3_rpt (IPR017897) - T[151-190] 8.948 - T[191-226] 18.167 - T[227-249] 11.131 - T[250-269] 9.386 - T[304-320] 6.564 - T[321-343] 10.401 - T[344-381] 14.153 - T[382-422] 13.825 - T[423-458] 14.816 |
| SUPERFAMILY |
TSP_type-3_rpt (IPR028974) - T[179-239] 2.09E-12 - T[226-269] 7.06E-7 - T[331-457] 3.14E-29 |
| Pfam |
Thrombospondin_3-like_rpt (IPR003367) - T[191-226] 5.0E-11 - T[230-249] 0.019 - T[251-269] 9.1E-5 - T[304-320] 0.0055 - T[344-381] 8.4E-9 - T[383-422] 9.6E-8 - T[424-457] 1.0E-9 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[459-627] 3.32E-76 - T[648-705] 2.06E-13 |
| ProSiteProfiles |
Thrombospondin_C (IPR008859) - T[462-706] 96.576 |
| Pfam |
Thrombospondin_C (IPR008859) - T[476-704] 2.5E-88 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSP4_HUMAN | 49.032 % | 658 | 0 |
| TSP3_HUMAN | 52.094 % | 678 | 0 |
| COMP_HUMAN | 47.979 % | 625 | 0 |