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TRANSCRIPT CARD

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  1. Clone 'cima8107576'
  2. Transcript 'Moocul.CG.ELv1_2.S11...'
  3. Transcript 'Cisavi.CG.ENS81.R1.5...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.5637379-5649683.20182.t

Possible name(s)

CALM1; CALM2; CALM3

Location

R1 [5,637,378 / 5,648,949]

Sequences

Amino acid sequence

Length: 107

>Cisavi.CG.ENS81.R1.5637379-5649683.20182.p
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD
GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGIK

Nucleotide sequence

Length: 472

>Cisavi.CG.ENS81.R1.5637379-5649683.20182.t
ATTTTAAATATTATTTGCATCGACGATACTGCATTACTGATTACAGGGTGACCAACTATC
TGAAGAACAAATAGCAGAATTCAAGGAAGCGTTCTCCCTCTTCGACAAGGACGGCGATGG
CACAATCACCACCAAGGAATTGGGAACAGTCATGAGATCTTTGGGACAAAATCCAACAGA
AGCAGAACTCCAGGACATGATCAATGAAGTTGACGCAGATGGCAACGGAACGATTGATTT
CCCAGAGTTTCTTACGATGATGGCTCGAAAAATGAAGGACACTGACAGTGAGGAGGAGAT
CAGGGAAGCCTTCAGAGTTTTCGACAAGGACGGCAATGGTTTCATATCAGCTGCTGAACT
TCGCCACGTTATGACCAACCTTGGTGAGAAACTCACCGACGAAGAAGTAGATGAAATGAT
CAGAGAAGCCGACATTGACGGCGATGGACAAGTCAACTATGAAGGTATTAAA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[1-106] 4.57E-40
Pfam
EF_hand_dom (IPR002048) - T[1-39] 2.7E-10 - T[47-104] 3.3E-15
ProSiteProfiles
EF_hand_dom (IPR002048) - T[8-43] 14.792 - T[45-80] 17.972 - T[81-107] 10.413
CDD
EF_hand_dom (IPR002048) - T[12-75] 3.91203E-12 - T[49-104] 2.69416E-20
SMART
EF_hand_dom (IPR002048) - T[12-40] 7.2E-9 - T[49-77] 5.8E-9 - T[85-106] 9.7
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[21-33] . - T[58-70] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CALM1_HUMAN 99.038 % 210 6.98E-72
CALM3_HUMAN 99.038 % 210 6.98E-72
CALM2_HUMAN 99.038 % 210 6.98E-72