- Transcript 'Cisavi.CG.ENS81.R155...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R155.749374-758407.10412.t
Possible name(s)
CHRD; CHRDL1; CHRDL2
Gene model
Location
R155 [749,374 / 758,407]
Amino acid sequence
Length: 973
>Cisavi.CG.ENS81.R155.749374-758407.10412.p
MTRYYVTLLIIALTSCLGSGFLRSFPNSVRMPAKSPRGCVFGRQYHVIGSSWHPNLGRPF
GIMYCVTCHCIKETTGLKPNGEPQDQTRVTCHDVRKDCPHVTCKGAKVPRGGCCKKSTRS
PPPTSSSSSHSSHTFDNNFSSKNEDLSERRKIFTEISMNSDDSKANLEEKTKHYVALLTS
ENQGPLLRATFNLHRDNLHFTIQYLGDQRPSAIEMLTDDDVIIYTHVTEASPKPGLPIVC
GVWRNLPKHVISALDKKSLQLKAVFAEADALNVTSQGKISRHRALSRETFSSILYPPRDG
ASGVIAMMSLGRHRFNRLHFAVILRNPLMMSEAKTVTVRLINHENRTLRSTEMTLPAQID
ELAEVWPINSEIHRSLGEGKLRIELVARTTEARDKVRYIGGIAPKASCDLLQTVLSGSDC
NQPASTGAAGSAIFNVNLDNTVTYQVALVGMSSRVTSISLVGEYRKKRTRVIADITPQFE
DGAAQGTLESLNGKELHLLLSDRVRVTVQTKQSNSGELGGHVTSLLFGGHLARYKGLPIP
LAGALVRPPVATGAAGHAWLELNNDCHLYYEIVVSGLNKERDTTMAAHLHGLAEIAGIEA
EHKQLLKGFYGKEAQGILRELTAEIYDHLNRGTAFVQIATKSNPNGEIRGRVHIPNTCAG
NFRSETTRKHDSSNTDGRSRPIVGSDVTTSRLSDLDPVVHDGVITDRRLELDPTSCYVTG
GWKRHGSEWAPDYDLKCTVCVCESGSVLCDPVFCPELECARPVAIEGRCCPVCNDGFGGI
PTKDDDGASIGSLFGSPISPNLSDLKTTEKEKKEEGCYYGGDGKTYATGSWWHPYFKRFG
HIACVNCTCQPDGEIVCSKITCPAVTCSNPVKRNSGDCCKTCPDEVGRSRHEPRDHSMQE
DSGTRMCHFGGQLRAPGEKWKLQIPGRRLECIECECATHGLKHKCRRKCPAVHHACSRVE
RSVNSCCPWRCLD
Nucleotide sequence
Length: 3,008
>Cisavi.CG.ENS81.R155.749374-758407.10412.t
ATGACACGATATTACGTCACACTTTTAATAATAGCTCTGACGTCATGTTTAGGATCGGGA
TTTTTACGGAGTTTTCCAAACAGTGTGAGAATGCCCGCAAAAAGTCCAAGAGGCTGTGTT
TTCGGGCGGCAGTACCACGTGATCGGGTCGTCATGGCATCCGAACTTGGGACGACCTTTC
GGGATAATGTATTGCGTGACGTGTCATTGTATAAAAGAGACCACCGGACTCAAACCCAAT
GGCGAACCCCAAGATCAAACAAGAGTGACGTGTCATGACGTCAGAAAAGACTGTCCCCAC
GTCACATGCAAGGGAGCAAAGGTACCCCGAGGGGGTTGCTGCAAAAAATCGACCCGTTCA
CCTCCTCCTACCTCCTCCTCCTCCTCCCACTCCTCTCACACCTTCGACAACAACTTTTCG
TCCAAAAACGAGGATTTATCCGAGCGACGCAAAATCTTCACTGAGATATCGATGAACAGC
GACGATTCTAAAGCAAACTTGGAAGAGAAGACAAAGCATTACGTAGCTTTGCTCACCAGC
GAAAACCAAGGACCATTGCTGAGAGCTACGTTCAATCTTCACCGGGATAACCTACACTTT
ACAATCCAATATTTGGGAGACCAAAGACCTTCCGCCATTGAAATGCTCACCGACGATGAC
GTAATCATTTACACCCACGTGACCGAAGCTTCACCGAAACCTGGTCTTCCTATTGTTTGC
GGGGTTTGGAGGAATCTGCCGAAGCACGTGATAAGTGCGCTCGACAAAAAGTCTCTTCAG
CTCAAAGCAGTTTTCGCTGAAGCCGACGCACTTAATGTGACGTCACAGGGGAAGATATCA
CGTCACAGAGCACTGAGTCGAGAAACTTTCAGTTCAATTTTATATCCACCGCGAGACGGC
GCCAGTGGGGTGATCGCAATGATGTCATTGGGACGTCATAGATTCAACAGATTGCATTTT
GCTGTGATTCTAAGAAACCCTTTAATGATGTCAGAAGCCAAGACGGTTACAGTTCGCTTA
ATCAACCATGAAAATCGAACGTTACGCTCCACTGAGATGACGCTTCCAGCTCAGATTGAC
GAACTGGCTGAGGTCTGGCCGATCAATTCCGAAATCCACCGAAGTCTGGGTGAGGGTAAA
CTTCGGATCGAGCTTGTTGCTAGGACGACGGAGGCACGTGACAAAGTGCGATACATCGGC
GGAATTGCTCCCAAAGCTTCATGCGACTTGTTGCAAACTGTGTTATCTGGAAGCGATTGC
AATCAGCCGGCAAGTACAGGGGCTGCCGGTTCTGCTATTTTCAATGTAAATCTGGACAAC
ACTGTTACATATCAGGTGGCGCTAGTGGGAATGTCAAGTCGCGTCACCTCCATCTCACTG
GTGGGGGAATACCGGAAGAAGAGAACACGGGTCATCGCCGATATAACTCCACAGTTCGAA
GATGGCGCTGCTCAAGGAACATTGGAATCACTAAATGGAAAAGAGCTGCATCTGCTACTG
AGCGACCGGGTCCGGGTGACCGTGCAAACTAAGCAAAGTAACAGTGGGGAGTTGGGAGGT
CACGTGACATCTCTCCTATTCGGTGGGCATTTGGCGAGATACAAAGGTCTGCCGATTCCG
TTAGCAGGTGCTCTTGTGCGCCCGCCCGTGGCCACCGGCGCTGCTGGTCACGCTTGGCTG
GAGCTGAACAACGACTGCCATCTTTATTACGAAATAGTTGTGTCTGGGCTCAACAAGGAA
CGCGATACAACAATGGCCGCCCATCTGCATGGCTTGGCTGAGATAGCTGGGATAGAAGCT
GAGCACAAACAACTACTGAAAGGATTTTACGGCAAAGAGGCCCAAGGTATACTGAGAGAG
TTAACTGCTGAAATTTACGATCATTTGAATAGAGGAACTGCATTTGTACAGATCGCGACG
AAAAGCAATCCCAACGGCGAGATTCGGGGTCGTGTGCACATCCCTAACACTTGTGCTGGT
AACTTTAGAAGCGAGACGACCCGAAAACACGATTCTTCGAACACTGACGGGCGATCAAGA
CCCATTGTGGGTTCTGACGTCACAACTTCAAGGTTGAGTGATTTGGACCCAGTTGTACAT
GACGGGGTAATCACCGACCGACGGTTAGAGTTGGACCCCACTTCATGTTACGTAACCGGA
GGTTGGAAACGCCACGGTAGTGAATGGGCCCCCGATTACGACCTAAAGTGCACAGTCTGT
GTTTGCGAGTCGGGAAGTGTCCTCTGCGATCCAGTATTCTGTCCCGAGCTCGAGTGTGCG
AGACCTGTTGCCATTGAGGGGCGCTGTTGTCCAGTTTGCAATGACGGGTTTGGGGGAATT
CCCACTAAAGACGACGATGGGGCTTCAATAGGATCACTCTTCGGTTCTCCTATTTCACCT
AATCTCTCCGATTTAAAAACGACAGAGAAAGAGAAAAAGGAAGAAGGTTGCTACTACGGT
GGAGATGGGAAAACATACGCAACCGGGTCATGGTGGCACCCGTATTTCAAGCGGTTCGGT
CACATTGCTTGCGTCAACTGCACTTGCCAGCCTGATGGGGAGATCGTGTGCAGTAAGATC
ACGTGTCCGGCGGTCACGTGTTCAAACCCGGTCAAGCGGAACTCAGGCGACTGCTGCAAA
ACTTGCCCAGACGAAGTCGGGCGATCGCGTCACGAACCACGTGACCACAGCATGCAAGAA
GACAGCGGGACGAGAATGTGTCATTTCGGTGGCCAGCTGAGGGCGCCAGGCGAGAAGTGG
AAATTACAAATTCCCGGACGAAGATTAGAATGCATCGAATGTGAATGCGCTACACATGGA
CTAAAGCACAAATGTCGGCGGAAATGTCCAGCTGTCCATCACGCGTGCAGTCGTGTGGAA
CGAAGCGTGAACAGCTGTTGCCCTTGGCGATGCCTCGACCCAACCCCATGAGCGGGATTC
CTTATTTTCAATCCTATTTCACTTTTTACTTTTGTTCGTTGTCGATGTGTGTTGTTGCGT
ACGCTTTT
| PIRSF |
Chordin (IPR016353) - T[2-973] 6.9E-271 |
| SMART |
VWF_dom (IPR001007) - T[39-115] 0.71 - T[716-773] 1.2E-9 - T[817-882] 7.0E-5 - T[907-971] 0.76 |
| ProSiteProfiles |
CHRD (IPR010895) - T[170-284] 13.526 - T[286-405] 10.129 - T[407-527] 18.845 - T[533-657] 20.952 |
| SMART |
CHRD (IPR010895) - T[409-524] 1.1E-18 - T[535-654] 4.6E-29 |
| Pfam |
CHRD (IPR010895) - T[412-522] 1.0E-8 - T[539-652] 1.8E-19 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[714-774] 11.873 - T[815-883] 10.754 |
| Pfam |
VWF_dom (IPR001007) - T[716-773] 3.5E-9 - T[822-882] 1.8E-8 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[737-773] . - T[844-882] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHRD_HUMAN | 34.861 % | 482 | 3.36E-155 |
