Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.5458147-5500229.20135.t

Possible name(s)

HIP1; TLN1; TLN2

Gene model

Cisavi.CG.ENS81.R1.5458147-5500229

Location

R1 [5,476,104 / 5,481,611]

Sequences

Amino acid sequence

Length: 369

>Cisavi.CG.ENS81.R1.5458147-5500229.20135.p
MQHCAQELGATSKAVGASMAQLLTRSSSVRNCSPQGNEDYTGMAARYTANALRTLVGAAR
GVAANLPDLDSQLHLLETCRDVMDKSVNLMQEAKLAVEDPENPENRQRLAQTRVSNGKSV
NHILRAQLTRKDVGLASQCTINCQDIAVWSTVGCVVKVSHSHRCACHIPSQSTHMCLLPS
QTYHSFPQFPVNNANFQTAQAQLNRTAEELNIAANDLVGASRGTPSELAASSTNYNDRFT
ELLDAGMNVAGQSRDKDDQGQVIGNLKSISMASSKLLLAAKALSADPGAPNAKNQLSAAA
RAVTESINNLITHCTETAPGQKECDNALRQLKTVKEMLENPNEPVNDFSYFDCLESVMDN
SKMLGESMS

Nucleotide sequence

Length: 1,238

>Cisavi.CG.ENS81.R1.5458147-5500229.20135.t
GCGGGAGAGGTGTGTGGTGCCAGTGGCATCGACGCCGCCTTGGAAACAGTGACTGCACTT
GACCGTCAGTTGTCAGTTTACTGCAACGACGCCAAGAACAACCAGTTACAACCCCTGCCG
GGACAAACCATGCAACACTGCGCTCAGGAGTTGGGAGCAACTTCGAAGGCAGTTGGAGCC
TCAATGGCCCAACTACTCACCCGCAGCAGCTCAGTAAGAAATTGTTCACCTCAGGGCAAC
GAGGACTACACCGGCATGGCAGCTCGATACACCGCCAACGCACTCCGCACGTTGGTGGGT
GCTGCACGTGGCGTGGCTGCCAATCTACCCGACCTCGACTCACAACTCCACCTGCTGGAG
ACGTGTCGTGACGTGATGGACAAGTCGGTGAACCTCATGCAGGAAGCCAAGCTCGCCGTC
GAGGACCCTGAGAACCCAGAAAATAGGCAGCGACTTGCTCAGACACGTGTAAGTAATGGC
AAGAGTGTTAATCATATTTTAAGAGCACAATTAACCAGAAAAGACGTCGGGTTAGCCAGT
CAGTGTACCATAAATTGCCAAGATATTGCAGTGTGGTCTACTGTAGGCTGTGTGGTTAAG
GTGTCTCACTCACATAGATGTGCTTGTCACATACCTTCACAAAGCACACATATGTGTTTG
TTACCTTCACAAACCTACCACTCCTTCCCACAGTTCCCAGTAAACAATGCGAACTTCCAA
ACCGCGCAAGCCCAGCTGAACAGGACGGCTGAAGAGTTGAACATCGCGGCGAACGATTTG
GTCGGGGCATCAAGGGGAACTCCCTCCGAACTGGCAGCCTCCAGCACTAACTACAATGAC
AGATTCACCGAGTTGTTGGATGCCGGGATGAACGTGGCGGGGCAATCTAGGGACAAAGAT
GACCAGGGTCAGGTGATCGGGAACCTGAAGAGCATCTCCATGGCATCCAGCAAGCTCCTT
CTTGCTGCCAAAGCTCTCTCTGCTGATCCTGGAGCTCCCAATGCCAAGAACCAGCTCTCT
GCTGCTGCTCGTGCGGTGACGGAAAGCATCAACAACCTTATCACCCACTGTACGGAGACC
GCCCCTGGGCAGAAGGAATGCGATAATGCTTTGAGACAGCTTAAGACCGTCAAAGAGATG
CTGGAGAATCCTAACGAACCGGTCAACGACTTCTCCTACTTCGACTGCCTTGAGAGTGTG
ATGGACAACTCGAAGATGCTGGGAGAGTCGATGAGCGG

InterProScan

SUPERFAMILY	Alpha-catenin/vinculin-like_sf (IPR036723) - T[1-127] 4.55E-12 - T[188-322] 4.24E-35
Pfam	Vinculin-bd_dom (IPR015009) - T[199-310] 3.7E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TLN1_HUMAN	47.154 %	303	1.18E-92
TLN2_HUMAN	53.117 %	328	2.17E-101