- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R143...' >
- Transcript 'KH2012:KH.C9.234.v2....' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R1.5...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.5458147-5500229.20134.t
Possible name(s)
HIP1; TLN1; TLN2
Gene model
Location
R1 [5,475,258 / 5,499,706]
Amino acid sequence
Length: 1,444
>Cisavi.CG.ENS81.R1.5458147-5500229.20134.p
DLKNPTVQQNLITASNEFVPVSGNEDYTGMAARYTANALRTLVGAARGVAANLPDLDSQL
HLLETCRDVMDKSVNLMQEAKLAVEDPENPENRQRLAQVAKAVSHALNNCINCLPGQRDV
DEALKNIAESSKRLLSNQFPVNNANFQTAQAQLNRTAEELNIAANDLVGASRGTPSELAA
SSTNYNDRFTELLDAGMNVAGQSRDKDDQGQVIGNLKSISMASSKLLLAAKALSADPGAP
NAKNQLSAAARAVTESINNLITHCTETAPGQKECDNALRQLKTVKEMLENPNEPVNDFSY
FDCLESVMDNSKMLGESMSGITQHARASELESFGEAVTATQKSLIGLTEAAAQAAYLVGI
ADPNSEAGTQGLVDQTQFARANQAIQMACQSLLDPSSNQPQVLSAATIVAKYTSALCNVC
RVASNKTTNTVARKHFVHSAKEVAHATANLVRTIKALDGNFSEENRANCSQATKPLIDAV
ENLTTFASNPEFASVPAKISNEAREAQRPIIESGKQMLESSSELIKTARKLANNPKDPPT
WQVMAGHSRVVSDSIKKLIANIRDNAPGQKECDEAIDRINESIQQFNDASLSAMDQSLPA
RDDNSLNGFQAMVVDTVNQINKCVDPLANAAKEDAAQLGRQVVAQMASYFEPLAHATIGA
ASNSVNHQRQMDILDYSKTLAESALQLMFAAKEGGGNPKADNTHEAIDEAAESMKEAIED
LLKSVQEAPEALMSGMVDTICSATAILHSNVQAGEDDTFADYQTSIMRHCRAIVVTSSDM
SMAMNTRPDELTTLAKKVTGENYKIKLHFSPKIKNKCLNNEATNVSNHIKRSIQDLGEAC
KELVTASGMVQSNPQGLYTKKDLNRMLARTSIEKVSYVMSSLQEGGRGTQACINAHTKVQ
GIIGDLDTTLMFVTSGALNPESDNESFAEHRENILATAKALVEDTKQLVAGAAGGQEKLA
GAAQSASQTISKLADVVKSGASSLGADDPDTQVILINAVRDVASALADLINSTKDASGKS
TSDQSMLHLKASAKAMVTNVTSLLKTVKSVEDEAAKGPRAIEQTINSIKQELKMLQSVAG
EERRATPEELIQITKPITNATAKAVAAGKFCRQEDMIVCANMGRKAVFDMIHICRASAAS
TDDQVQQKETLKFGAGVAEAYVSLLSNVLLTSQQPGNNDLKKNLNPLSKNVATAVSNLVR
SGESMKGTDWVDPNDPNVIAEQELLAAALSIEAAAKKLAQLRPRKKPKQADESLNFEEQI
LEAAKSIATATTALVKAASAAQKELVLQGKVGSIAAMRHDDGQWSQGLISAAQMVARATG
NLCEAANQAVQGEASEEKLVTSAKQVASSTAQLLVACKVKADPNSENMKRLQIAGNAVKH
ASEDLVKAASESANSDDEVEVVINSRLVGGIAQEMMAQEEILRKERELQSARQKLAQIRR
MRYK
Nucleotide sequence
Length: 4,332
>Cisavi.CG.ENS81.R1.5458147-5500229.20134.t
GATCTAAAAAACCCAACTGTGCAGCAGAACCTGATAACTGCTTCGAATGAATTTGTCCCT
GTAAGTGGCAACGAGGACTACACCGGCATGGCAGCTCGATACACCGCCAACGCACTCCGC
ACGTTGGTGGGTGCTGCACGTGGCGTGGCTGCCAATCTACCCGACCTCGACTCACAACTC
CACCTGCTGGAGACGTGTCGTGACGTGATGGACAAGTCGGTGAACCTCATGCAGGAAGCC
AAGCTCGCCGTCGAGGACCCTGAGAACCCAGAAAATAGGCAGCGACTTGCTCAGGTGGCG
AAAGCTGTGTCACACGCGCTGAACAACTGCATCAACTGCCTTCCGGGGCAAAGAGATGTC
GACGAGGCTCTTAAGAACATTGCTGAGAGCAGCAAACGTCTGCTCTCCAACCAGTTCCCA
GTAAACAATGCGAACTTCCAAACCGCGCAAGCCCAGCTGAACAGGACGGCTGAAGAGTTG
AACATCGCGGCGAACGATTTGGTCGGGGCATCAAGGGGAACTCCCTCCGAACTGGCAGCC
TCCAGCACTAACTACAATGACAGATTCACCGAGTTGTTGGATGCCGGGATGAACGTGGCG
GGGCAATCTAGGGACAAAGATGACCAGGGTCAGGTGATCGGGAACCTGAAGAGCATCTCC
ATGGCATCCAGCAAGCTCCTTCTTGCTGCCAAAGCTCTCTCTGCTGATCCTGGAGCTCCC
AATGCCAAGAACCAGCTCTCTGCTGCTGCTCGTGCGGTGACGGAAAGCATCAACAACCTT
ATCACCCACTGTACGGAGACCGCCCCTGGGCAGAAGGAATGCGATAATGCTTTGAGACAG
CTTAAGACCGTCAAAGAGATGCTGGAGAATCCTAACGAACCGGTCAACGACTTCTCCTAC
TTCGACTGCCTTGAGAGTGTGATGGACAACTCGAAGATGCTGGGAGAGTCGATGAGCGGT
ATCACGCAGCACGCCAGAGCCTCGGAGCTCGAGAGCTTCGGGGAAGCAGTCACCGCAACA
CAGAAGTCGCTGATCGGACTGACTGAAGCTGCTGCTCAGGCTGCATATTTGGTCGGTATA
GCTGATCCGAACAGTGAAGCTGGCACGCAGGGCCTCGTGGACCAGACCCAATTTGCACGA
GCGAACCAAGCTATACAGATGGCTTGTCAGAGCTTGCTGGACCCCTCCAGCAATCAGCCA
CAGGTTCTGTCAGCTGCTACCATCGTAGCTAAGTACACCTCGGCGTTGTGCAACGTATGC
AGAGTGGCATCGAACAAAACTACGAACACAGTGGCACGCAAACACTTTGTACACTCGGCC
AAGGAAGTGGCTCACGCTACTGCTAACTTGGTCCGAACTATTAAGGCATTGGACGGAAAT
TTCTCAGAGGAGAACCGAGCAAATTGCTCTCAAGCCACCAAACCACTGATCGACGCTGTG
GAGAATCTCACCACCTTCGCCTCCAACCCCGAGTTCGCCAGCGTTCCTGCTAAGATCAGT
AACGAGGCGCGTGAGGCACAACGGCCGATTATCGAATCAGGGAAACAGATGCTGGAAAGC
TCGAGCGAGCTCATTAAAACCGCCCGGAAACTCGCAAACAACCCGAAGGATCCTCCCACC
TGGCAAGTGATGGCCGGTCACTCTCGAGTCGTCTCTGACTCGATTAAGAAACTCATCGCA
AATATAAGGGACAACGCACCGGGTCAGAAAGAATGTGACGAAGCCATCGACCGAATCAAT
GAATCCATCCAGCAGTTCAACGACGCATCGCTATCCGCCATGGACCAAAGCCTGCCTGCT
CGTGATGATAATTCACTCAATGGATTCCAAGCAATGGTTGTGGACACGGTGAACCAGATC
AACAAGTGTGTGGATCCACTGGCCAATGCTGCTAAAGAGGATGCAGCTCAACTTGGTCGA
CAGGTAGTTGCGCAAATGGCGAGTTACTTTGAGCCACTGGCCCACGCCACCATCGGAGCC
GCCTCCAACTCAGTGAATCACCAGCGGCAGATGGATATACTCGATTACAGCAAGACTTTA
GCGGAATCCGCTCTGCAACTCATGTTCGCTGCCAAGGAAGGGGGAGGCAATCCAAAGGCT
GACAACACGCATGAAGCAATCGACGAAGCAGCTGAATCGATGAAAGAAGCGATCGAGGAT
CTCCTTAAATCAGTCCAGGAAGCACCTGAAGCTCTAATGTCCGGTATGGTGGACACTATC
TGCTCTGCCACTGCGATCCTGCACAGCAATGTGCAGGCAGGGGAAGACGACACATTCGCC
GACTACCAGACCTCCATAATGCGGCACTGCAGGGCGATCGTAGTGACGAGCAGCGACATG
AGCATGGCGATGAACACGCGACCCGACGAGCTCACCACGCTCGCGAAGAAGGTCACCGGG
GAAAACTATAAAATTAAGTTACACTTTTCGCCTAAAATTAAAAATAAATGTCTGAATAAT
GAGGCGACAAACGTTAGCAACCACATCAAGCGATCGATTCAAGATCTCGGTGAAGCTTGC
AAGGAGCTGGTCACCGCATCCGGGATGGTGCAGAGCAATCCGCAGGGACTATACACTAAG
AAGGATCTGAATCGGATGCTTGCAAGAACATCAATAGAGAAGGTGTCGTACGTGATGTCA
TCGTTACAAGAAGGAGGGCGTGGCACACAGGCATGCATCAACGCGCATACCAAGGTACAG
GGCATCATCGGAGACCTGGACACCACCCTCATGTTCGTCACCTCAGGAGCACTCAACCCT
GAATCTGACAATGAATCCTTCGCAGAGCACAGAGAAAACATACTGGCGACGGCAAAGGCT
TTGGTGGAAGACACCAAACAACTGGTGGCTGGCGCTGCCGGTGGGCAGGAGAAGCTCGCC
GGAGCTGCTCAATCTGCGTCACAGACAATCAGCAAGTTGGCTGATGTTGTTAAGAGTGGG
GCGTCCAGTTTGGGGGCTGATGACCCAGATACACAGGTGATACTGATCAACGCGGTGAGA
GACGTCGCATCAGCTCTAGCAGACCTCATCAACTCAACGAAAGATGCATCTGGCAAGTCC
ACCTCAGATCAATCAATGCTGCATCTCAAAGCATCCGCCAAGGCAATGGTAACAAACGTG
ACTTCACTTTTGAAAACAGTGAAATCGGTGGAAGATGAAGCAGCTAAAGGACCCAGAGCG
ATTGAACAAACCATCAACTCGATTAAACAAGAGCTCAAGATGCTTCAGTCGGTGGCTGGT
GAGGAGAGAAGAGCAACTCCGGAGGAACTGATCCAAATCACCAAACCAATCACCAATGCC
ACCGCGAAGGCTGTGGCTGCCGGCAAGTTTTGCCGCCAGGAGGATATGATTGTGTGCGCT
AACATGGGGAGAAAAGCTGTGTTCGATATGATCCATATCTGCAGGGCTTCAGCTGCCAGC
ACAGACGACCAGGTACAGCAGAAGGAAACCCTCAAATTCGGCGCTGGAGTTGCTGAAGCC
TATGTCAGCCTTCTAAGCAACGTACTGTTAACGAGCCAACAACCTGGCAACAATGATTTG
AAGAAGAATCTCAATCCTTTATCGAAAAACGTAGCTACAGCAGTGAGCAACCTTGTCAGA
TCTGGTGAAAGTATGAAAGGCACAGACTGGGTTGATCCTAACGATCCAAATGTCATCGCT
GAGCAAGAACTGCTGGCTGCTGCGTTATCCATCGAGGCAGCTGCAAAGAAACTTGCTCAA
CTGAGGCCACGCAAGAAGCCTAAGCAAGCCGATGAAAGCTTGAACTTCGAAGAACAAATC
CTTGAAGCGGCGAAGTCAATCGCCACGGCAACCACTGCACTCGTCAAGGCTGCGTCTGCT
GCTCAGAAAGAACTTGTGTTGCAGGGGAAAGTTGGTTCTATAGCCGCAATGCGTCACGAT
GACGGCCAGTGGTCCCAGGGCCTCATTTCCGCAGCACAGATGGTGGCACGCGCCACTGGC
AACCTGTGTGAAGCCGCAAACCAAGCCGTGCAGGGCGAGGCAAGCGAAGAGAAATTGGTG
ACATCGGCAAAACAAGTTGCGTCGTCCACAGCCCAGTTGTTGGTGGCCTGCAAAGTGAAA
GCAGACCCCAACAGTGAGAATATGAAACGCTTGCAGATCGCTGGAAACGCCGTAAAGCAC
GCGTCCGAGGACCTGGTCAAAGCGGCTTCCGAATCGGCCAACTCCGATGACGAGGTCGAA
GTTGTCATAAACTCGCGACTCGTCGGCGGAATTGCGCAAGAGATGATGGCACAAGAGGAA
ATTTTACGGAAAGAACGCGAACTCCAATCCGCGAGGCAAAAACTTGCCCAAATTCGCCGC
ATGCGCTACAAG
| SUPERFAMILY |
Alpha-catenin/vinculin-like_sf (IPR036723) - T[16-118] 4.71E-15 - T[135-272] 1.88E-34 - T[600-726] 8.63E-7 - T[752-887] 7.53E-13 - T[922-1047] 2.51E-8 |
| Pfam |
Vinculin-bd_dom (IPR015009) - T[149-260] 3.0E-4 - T[758-887] 1.6E-21 |
| SUPERFAMILY |
I/LWEQ_dom_sf (IPR035964) - T[379-466] 2.09E-11 - T[1210-1398] 7.26E-48 |
| CDD |
Talin1/2-RS (IPR037438) - T[565-737] 6.87301E-73 |
| ProSiteProfiles |
ILWEQ_dom (IPR002558) - T[1208-1444] 54.041 |
| ProDom |
ILWEQ_dom (IPR002558) - T[1246-1444] 2.0E-67 |
| SMART |
ILWEQ_dom (IPR002558) - T[1251-1444] 1.5E-81 |
| Pfam |
ILWEQ_dom (IPR002558) - T[1300-1444] 3.1E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TLN1_HUMAN | 58.754 % | 1602 | 0 |
| TLN2_HUMAN | 61.204 % | 1641 | 0 |
| HIP1_HUMAN | 30.568 % | 99.8 | 5.66E-21 |