- Molecular Tool 'Ci-nodal mRNA' >
- Molecular Tool 'Cirobu_Eph1 MO (Fiuza 2020)' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- EST 'FK176543.1' >
- Transcript 'Cisavi.CG.ENS81.R15....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R15.1755876-1766615.15905.t
Possible name(s)
AL359736.1; ARHGEF9; SPATA13
Gene model
Location
R15 [1,755,875 / 1,761,400]
Amino acid sequence
Length: 820
>Cisavi.CG.ENS81.R15.1755876-1766615.15905.p
MLGSMAAEEATQVRVARNGASDIEKKKQYNSIFRSFVKRNKLLSRVVGSARCVSTSTLPS
HSKGQPVEISNSSTSQANPVAADKCNRKMSRDLVCRRSFEVRKTPAGTFTPQCTRANVMQ
PPPAQLRSRAQSSNVYLEIQPFEDDYCLDGDCDDDDVFDITLTRACSKPLSRSHTHPKHR
TKSVSSGCISSESGYGTMTRNGPRLRTPDNDEEVFVNTSTQTADGTSSARAEGIFVEALW
DHVTMDPDELGFKVGDVIRVNDMSNADWWWGEIDSAEGWFPATFVRILVNQQIRTDSNNS
DVIISNYASSSQSEDEISVTSHEFSRVTSFNDFCQCTEQRSTTSVHCNVCGRPLTDATPA
SRTSIAHPSKQPEIVITKPPPSNTGRKSSITRDQIRTNVIREIINSEKVFVGHLKDVVQG
YLTRCRNRSDMFSDEILNTLFGNIEDIYLFQREFAAELEASLDNVSTHATNIGNVFLKHK
DGFCIYSEYCNNHPQAVAELAQLLTNKKFMHFFEACRLLQRMIDIPLDGFLLTPVQKICK
YPLQLAELLKYTHPGHQDYEAVKSALEAMKGVARMINERKRKMENLRKISQWQASIVNWQ
GESVLSRSCELVHSGEIHALSQVKGKPKPRVAFLFDHQMILCKKDLLRRDLLYYKARIDL
DAVEVAPIDPESPRSSHSGSDFHSSSSLGSCQGWKVTDTTTGESGLMYSKNQEDCGKWMK
AFALERKIVRTEGTASPLLNEALTLGLLRNSLPMSRKPKESGSQRLAPSYRNRMKMAQEL
QEYSTKQNSFASDKPSFFSSVAGKLTPFRRTNPRESSFVF
Nucleotide sequence
Length: 3,244
>Cisavi.CG.ENS81.R15.1755876-1766615.15905.t
TGTAGATTGACTTCTTAGACTTCCTGTTTCAATGGCGCTGCTTCGCAAGCTTAACGCTCC
CAGGTGAGCCGTGGATTAATGCTTGGTTCAATGGCGGCCGAGGAAGCCACGCAAGTTCGG
GTCGCCAGGAATGGTGCAAGTGACATCGAAAAGAAGAAGCAGTACAACTCCATATTCAGG
TCGTTTGTGAAAAGGAACAAATTGCTGTCGCGAGTTGTAGGTTCGGCCAGGTGCGTCTCC
ACTTCCACCCTCCCATCGCACTCCAAAGGACAACCTGTCGAAATTTCCAACTCTTCTACG
TCACAGGCGAACCCTGTTGCCGCGGACAAATGCAATAGAAAAATGTCGCGTGACCTTGTA
TGCCGCCGAAGTTTCGAGGTGCGGAAGACGCCAGCTGGAACGTTCACGCCTCAGTGCACA
AGGGCCAACGTTATGCAGCCTCCGCCAGCTCAGCTCCGCAGCAGGGCTCAGTCATCAAAC
GTATATTTAGAAATTCAACCTTTCGAAGATGACTACTGTCTTGATGGTGACTGTGACGAT
GATGATGTGTTTGACATCACTCTCACACGCGCATGCAGCAAACCCTTATCCCGGAGCCAC
ACTCACCCAAAGCACAGAACCAAATCCGTCTCAAGTGGCTGCATTTCGAGCGAGTCGGGC
TACGGGACCATGACCAGGAATGGGCCACGCTTAAGAACACCCGACAACGACGAGGAAGTC
TTTGTCAACACTTCAACACAGACAGCCGATGGCACGTCATCAGCCCGCGCGGAGGGAATC
TTCGTCGAGGCTCTGTGGGATCACGTGACCATGGATCCCGATGAGCTCGGATTCAAAGTC
GGTGACGTCATCCGCGTGAATGACATGTCGAACGCTGATTGGTGGTGGGGCGAGATTGAC
TCCGCGGAAGGGTGGTTTCCCGCCACATTTGTTCGGATCCTTGTGAACCAGCAAATTCGG
ACGGACTCCAATAACAGTGACGTCATCATTTCCAACTACGCCAGCAGCTCTCAGAGCGAG
GATGAGATTTCTGTAACGTCACATGAGTTTTCCCGCGTCACGTCGTTTAACGACTTCTGC
CAGTGCACCGAGCAGCGATCAACAACCTCAGTTCATTGTAATGTTTGTGGGAGGCCTTTG
ACGGACGCAACGCCTGCCAGCAGGACGTCCATTGCCCACCCGAGTAAACAACCCGAGATC
GTGATAACAAAGCCGCCACCTTCAAACACTGGTCGCAAATCCTCAATCACAAGGGACCAG
ATACGAACCAATGTCATTCGGGAAATCATCAACTCGGAAAAAGTCTTCGTCGGTCATCTT
AAGGACGTGGTACAGGGATACCTCACCCGATGTCGAAACCGGTCGGATATGTTTTCGGAC
GAGATTCTTAACACGTTGTTTGGAAACATAGAAGACATCTACCTGTTTCAACGAGAATTC
GCGGCTGAGTTGGAAGCATCTCTTGATAATGTGTCCACTCATGCAACGAATATCGGAAAC
GTCTTCTTAAAACACAAAGACGGCTTCTGCATTTATTCCGAATACTGCAACAACCACCCG
CAGGCTGTGGCCGAACTGGCCCAGCTGCTAACCAACAAAAAGTTCATGCATTTCTTCGAG
GCTTGCCGTTTGCTACAGCGCATGATCGATATTCCTCTAGATGGCTTCTTACTCACGCCG
GTTCAGAAGATCTGCAAATACCCCCTGCAGTTGGCGGAGTTGTTGAAGTATACCCACCCC
GGCCACCAAGATTACGAAGCTGTAAAATCTGCTCTGGAAGCGATGAAAGGCGTCGCTCGA
ATGATCAACGAAAGAAAACGTAAAATGGAGAATCTTCGCAAGATATCACAGTGGCAGGCC
AGCATAGTGAACTGGCAGGGCGAGAGCGTACTTTCCCGAAGCTGTGAGTTGGTGCATTCA
GGTGAAATCCACGCGCTCTCTCAAGTTAAAGGAAAACCAAAACCTCGCGTCGCATTCCTG
TTCGACCATCAGATGATTCTGTGCAAAAAGGATTTGCTCCGTCGTGACCTGCTGTACTAC
AAAGCCCGCATCGACCTTGACGCTGTCGAGGTTGCACCGATCGACCCAGAGTCGCCCAGG
TCGTCCCACTCGGGGTCCGACTTCCATTCTTCGTCGAGCTTAGGGTCGTGCCAGGGCTGG
AAGGTGACGGACACCACGACGGGCGAGTCGGGACTCATGTACAGCAAGAACCAGGAGGAT
TGTGGGAAATGGATGAAAGCGTTCGCCCTGGAACGCAAGATAGTTAGAACGGAAGGTACA
GCATCGCCTCTCCTCAACGAAGCTTTAACGCTGGGCTTGCTACGAAACTCGTTACCAATG
TCGCGGAAGCCAAAAGAATCCGGGTCCCAAAGGTTAGCGCCGTCGTACCGCAACCGAATG
AAGATGGCGCAGGAACTGCAGGAATACTCCACCAAGCAAAACAGCTTCGCGTCCGACAAG
CCCAGTTTCTTCAGCAGCGTGGCGGGCAAGTTGACGCCCTTCCGCCGTACCAACCCTCGG
GAAAGCAGCTTCGTATTTTAAGATTACGCGTCGTTTTAAATCGCTATTTTCATTTCCTGT
ATTTGCACACGTTGCTCTCTTTTTGAATTGGTTATCCATTCAAGAAGCTGGCGTTTCCCT
TTTTGCTGTATTATAAGTGTATAAACTATGGAGAAACATAAAATGATAATCTCCAAAGAT
GTATAAGGTTTTATTGCAACATAACATTGTCCAGGACAGTGCGGACGCTTGCTGTGTATT
TTACCACCAATCTGTTTTTATTTCCACTGTGTTTACCTCACCGCCAAACGTTCCGGTCGT
AGCTTTGGCCTCGTGGCCAGCACGACTGTATTATTAATTTTAACGAAGAAGAATGATTCT
TTTGCACGTGCAATTCACCAATACCACCTTTGCTGTTGTTGTTCACAATAAATGCTTACG
ACACACCACAGCAGACGAGATCACCACTAGTTTTCATTATACTTGATAAACGTGCTTGCG
TCACCCAGCAGGTACGACCTTGTCATAGCTTAACGAGACTATTTTTTTTCACTGGTCCCC
TATAAATTTCCTACATGTATGGTCGCTAGCTATTTGGTAAATAAGGAGTATTTAATAATT
TTTTTTTTAATTTTCGCATTGCCAACTGACCTTTTTTAACATTTGCAACCGAACAAGAAA
CCGATTGGAATAAACCAATTTATCCTGCAAAGGCGCCCGATAATAAAAAACAAACTGCAA
ATAT
| ProSiteProfiles |
SH3_domain (IPR001452) - T[231-290] 14.53 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[233-316] 2.67E-20 |
| SMART |
SH3_domain (IPR001452) - T[234-289] 1.5E-17 |
| Pfam |
SH3_domain (IPR001452) - T[238-285] 1.7E-10 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[370-601] 1.9E-80 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[385-600] 1.44E-61 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[395-579] 32.865 |
| CDD |
DH-domain (IPR000219) - T[396-577] 1.50457E-60 |
| SMART |
DH-domain (IPR000219) - T[399-578] 2.5E-64 |
| Pfam |
DH-domain (IPR000219) - T[399-577] 3.4E-45 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[527-552] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[602-743] 3.1E-29 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[610-727] 7.059 |
| SMART |
PH_domain (IPR001849) - T[611-729] 2.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHG4_HUMAN | 46.189 % | 393 | 6.35E-126 |
| SPT13_HUMAN | 38.942 % | 420 | 7.63E-137 |
| ARHG9_HUMAN | 53.801 % | 389 | 1.33E-126 |