Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R15.1711610-1726680.14113.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Cisavi.CG.ENS81.R15.1711610-1726680

Location

R15 [1,716,210 / 1,726,048]

Sequences

Amino acid sequence

Length: 223

>Cisavi.CG.ENS81.R15.1711610-1726680.14113.p
MDAGDGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTVNAKSFETS
KEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESA
GIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

Nucleotide sequence

Length: 796

>Cisavi.CG.ENS81.R15.1711610-1726680.14113.t
ACAGGTATCGTTATGGATGCCGGTGACGGTGTTTCCCACAATGTTCCTATCTACGAGGGT
TATGCGCTTCCTCACGCCATCGCCCGGTTGGATTTAGCTGGACGAGATCTCACTGATTAC
TTGATGAAGATTCTCACCGAGAGAGGATATTCTTTCGTCACAACCGTGAACGCGAAATCG
TTCGAGACATCAAAAGAAAAGCTTTGCTACGTTGCTCTTGATTTTGAGCAAGAAATGGCG
ACCGCTGCATCTTCTACGTCACTGGAGAAAAGCTATGAGCTTCCCGATGGTCAAGTCATT
ACGATCGGAAATGAGAGATTTAGATGCCCAGAAACGCTCTTCCAACCTTCTTTCATCGGA
ATGGAATCCGCTGGAATCCACGAAACCACCTACAACTCCATCATGAAGTGCGACATCGAC
ATCCGCAAGGATCTCTACGCCAACAACGTTCTCTCCGGAGGTACCACCATGTACCCTGGT
ATCGCTGACAGGATGCAGAAGGAGATCACTGCTCTTGCTCCCAGCACCATGAAGATCAAG
ATCATTGCTCCTCCTGAGAGGAAATACTCCGTATGGATCGGAGGCTCCATCCTCGCATCT
TTATCCACCTTCCAGCAGATGTGGATCACCAAGCAAGAATACGACGAAGCCGGTCCATCC
ATCGTCCACAGAAAATGCTTCTAAATCAATGAATTTAATGACGTTTTATAAAGTTTTTAT
TTTCTGATTTTATCAAGGGCATTTGATACTGTGTTTGACATTTAAAATAAACCTTTCTTT
CACCTAAATTAATAGA

InterProScan

SMART	Actin (IPR004000) - T[1-223] 2.9E-55
Pfam	Actin (IPR004000) - T[1-223] 1.7E-79
PANTHER	Actin (IPR004000) - T[1-222] 9.0E-148
ProSitePatterns	Actin_CS (IPR004001) - T[204-212] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ACTA_HUMAN	92.825 %	435	1.64E-155
ACTS_HUMAN	92.825 %	436	5.26E-156
ACTC_HUMAN	92.825 %	436	9.49E-156