- Molecular Tool 'Zicl>Ets:WRPW' >
- Transcript 'Cisavi.CG.ENS81.R151...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R151.123499-124836.04240.t
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
R151 [123,498 / 124,836]
Amino acid sequence
Length: 356
>Cisavi.CG.ENS81.R151.123499-124836.04240.p
MYSALSDRPYAAYDPRASLTAQTSFLQAHQHSIDSKPMQLNNVPSAAYYAGYGMIPHFPQ
SLHLATGWHNPVENRPPVHTSSTLSHPVACKWMNPKHGGRSCDVIFHDMHDLVNHVTRDH
VGGMDQTDHTCYWEDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMFGRSENLK
IHQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSYTHPSSLR
KHIRIHESNGDVITSSQSPTTEDAITDCNPLGGELIPRMTSSPINTSPQCDVTDNFSLMF
LFHERNLPQVSPTEPQNEPTNQPYYNDYYYQEAANAAHYKPTYTNVPFQLPQPFVA
Nucleotide sequence
Length: 1,192
>Cisavi.CG.ENS81.R151.123499-124836.04240.t
ATGTACAGTGCATTGAGCGATAGACCTTATGCTGCTTACGACCCAAGAGCCAGTCTCACA
GCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCCAAACCAATGCAGTTA
AACAACGTTCCAAGTGCTGCGTATTACGCTGGGTATGGAATGATTCCACATTTTCCTCAA
AGCTTACATCTCGCTACTGGATGGCACAATCCGGTGGAGAATCGTCCGCCGGTGCACACC
TCTTCGACTCTCTCGCATCCAGTCGCTTGCAAGTGGATGAACCCTAAACATGGCGGACGA
TCTTGTGATGTCATATTCCACGATATGCATGACTTGGTAAACCACGTGACACGAGATCAC
GTGGGTGGAATGGATCAGACCGATCACACTTGTTACTGGGAAGATTGTTCGAGGAAACGC
AAATGTTTCAAAGCCAAGTACAAGTTGGTCAACCACATTCGAGTTCACACTGGAGAGAAA
CCTTTTCTCTGTCCTTATCCCGATTGTGGTAAAATGTTCGGTCGAAGCGAAAATTTGAAG
ATTCATCAAAGAACTCATACAGGTGAACGACCTTTTCCTTGCAAATTCCCCGGCTGCGAA
AGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGCACAACACAGAGAAA
CTCTACACGTGCAAGTATGAAGGCTGCGATCGAAGCTACACTCATCCGAGCTCATTACGT
AAGCACATACGTATCCACGAATCCAATGGTGACGTCATCACTTCGTCACAATCACCAACA
ACAGAAGACGCGATTACCGACTGCAATCCCTTGGGAGGGGAATTAATTCCTCGAATGACG
TCCTCGCCTATTAATACGTCACCTCAATGTGATGTCACAGACAATTTCAGCCTCATGTTC
TTGTTTCACGAAAGGAATCTTCCACAAGTTTCACCAACAGAACCTCAGAACGAACCGACC
AACCAACCTTACTACAACGATTATTACTACCAAGAAGCCGCCAACGCAGCCCACTATAAA
CCAACTTATACCAACGTTCCTTTCCAATTACCGCAACCATTTGTCGCCTGATCCATTCAT
ATTATTAATAAATCGTTGAGAAATATATTAGTTATTCATCTGCAATAACTCCGGTAACCC
GACGGTGGGCGTGAGGTGATCTGACGATTGCCAGTGTGTTAACACCCTTGTT
| SMART |
Znf_C2H2_type (IPR013087) - T[129-156] 7.5 - T[162-186] 0.0012 - T[192-216] 0.044 - T[222-246] 7.9E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[134-161] 11.24 - T[162-191] 16.623 - T[192-221] 10.408 - T[222-251] 11.448 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[143-199] 3.19E-19 - T[203-247] 1.19E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[164-186] . - T[194-216] . - T[224-246] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 65.217 % | 233 | 1.85E-74 |
| ZIC2_HUMAN | 58.511 % | 237 | 1.13E-73 |
| ZIC3_HUMAN | 60.317 % | 244 | 3.68E-77 |