- Transcript 'Cisavi.CG.ENS81.R151...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R151.119452-120677.04229.t
Possible name(s)
ZIC1; ZIC3; ZIC4
Gene model
Location
R151 [119,451 / 120,677]
Amino acid sequence
Length: 355
>Cisavi.CG.ENS81.R151.119452-120677.04229.p
MYSALSDRPYAAYDPRASLTAQTSFLQAHQHSIDSKPMQLNSVPSAAYYAGYGMIPHFHQ
SLHLATGLHNPVENRQPVHTSSTLSHPVACKWKNPKHGGRSCDVIFHDMHDLVNHVTRDH
VGGMDQTDHTCYWEDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMFGRSENLK
IHQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSYTHPSSLR
KHIRMHESNGDVITSSQSPTTEDVTDCNPLRGELIPRMTSSPINTSPQCDVTDNSSPMFL
FHERYLPQVPPTEPQYEPTNQPYYNDYYYQEAANAAHYKPTYTNVPFQLPQPFVV
Nucleotide sequence
Length: 1,104
>Cisavi.CG.ENS81.R151.119452-120677.04229.t
ATGTACAGTGCATTGAGCGATAGACCTTATGCTGCTTACGACCCAAGAGCCAGTCTCACA
GCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCAAAACCAATGCAGTTA
AACAGCGTTCCAAGTGCTGCGTATTACGCTGGGTATGGTATGATACCACATTTCCATCAA
AGCTTACATCTCGCTACTGGACTGCACAATCCGGTGGAGAATCGTCAGCCGGTGCACACC
TCTTCGACTCTCTCGCATCCAGTCGCTTGCAAGTGGAAGAACCCGAAACATGGCGGACGA
TCTTGTGATGTCATATTTCACGATATGCATGACTTGGTAAACCACGTGACACGAGATCAC
GTGGGTGGAATGGATCAGACCGACCACACTTGTTACTGGGAAGATTGTTCGAGGAAACGC
AAATGTTTCAAAGCCAAGTACAAGTTGGTCAACCACATTCGAGTCCATACTGGAGAAAAA
CCTTTTCTCTGTCCTTATCCCGATTGTGGTAAAATGTTTGGTCGAAGCGAAAATTTGAAG
ATTCATCAAAGAACTCATACAGGTGAACGACCTTTTCCTTGCAAATTCCCCGGTTGCGAA
AGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGCACAACACAGAGAAA
CTCTACACGTGCAAGTATGAAGGCTGCGATCGCAGCTACACCCATCCGAGCTCATTACGT
AAGCACATACGTATGCATGAATCCAATGGTGACGTCATCACTTCGTCACAATCACCAACA
ACAGAGGACGTGACCGACTGCAATCCCTTGCGAGGGGAATTAATTCCTCGAATGACGTCA
TCGCCTATTAATACGTCACCTCAATGTGATGTCACAGACAATTCCAGCCCCATGTTCTTG
TTCCACGAAAGATATCTTCCACAAGTTCCACCAACAGAACCTCAGTACGAACCGACCAAC
CAACCTTACTACAACGATTATTACTACCAGGAAGCCGCCAACGCAGCCCACTATAAACCA
ACTTATACCAACGTTCCTTTCCAATTACCGCAACCATTTGTCGTCTGAACGATTCATCTT
ATTAATACATCGTTGAGAAATATA
| SMART |
Znf_C2H2_type (IPR013087) - T[88-120] 270.0 - T[129-156] 7.5 - T[162-186] 0.0012 - T[192-216] 0.044 - T[222-246] 9.8E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[134-161] 11.24 - T[162-191] 16.623 - T[192-221] 10.408 - T[222-251] 11.281 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[143-199] 3.09E-19 - T[203-247] 2.6E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[164-186] . - T[194-216] . - T[224-246] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 62.069 % | 231 | 1.38E-73 |
| ZIC3_HUMAN | 59.278 % | 242 | 3.13E-76 |
| ZIC1_HUMAN | 61.364 % | 233 | 7.18E-73 |