- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Molecular Tool 'Ci-lefty/antivin mRNA' >
- Transcript 'Cisavi.CG.ENS81.R151...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R151.104815-106074.04213.t
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
R151 [104,814 / 106,074]
Amino acid sequence
Length: 309
>Cisavi.CG.ENS81.R151.104815-106074.04213.p
MIPHFPQSLHLATGLHNPVENRQPVHTSSTLSHPVPCKWMNPKYGGRSCDVIFHDMHDLV
NHVTRDHVGGMDQTDHTCYWEDCSRKRKCFKAKYKLVNHIRVHTGEKPFLCPYPDCGKMF
GRSENLKIHQRTHTGERPFPCKFPGCERRFANSSDRKKHSYMHNTEKLYTCKYEGCDRSY
THPSSLRKHIRMHESNGDVITSSTSPTTSCGSSDFASSPEHVEQFQTYPAISEPMTSQPM
SINPHVTSSPDTSPPKLMPCEMNYPGFSYKREYQHGNWQTFPSSDLPDLYNQPDYLPQTF
LPPTQFSVV
Nucleotide sequence
Length: 1,182
>Cisavi.CG.ENS81.R151.104815-106074.04213.t
ATCAATATCATGTACAGTGCATTGAGCGATAGACCTTATGCTGCTTACGACCCAAGAGCC
AGCCTTACAGCTCAAACCTCATTCCTTCAAGCGCATCAACATTCCATCGATTCCAAACCA
ATGCAGTTAAACAGCGTTCCAAGTGCTGCGTATTACGCTGGGGTATGGAATGATTCCACA
TTTCCCTCAAAGCTTACATCTCGCTACTGGACTGCACAATCCGGTGGAGAATCGTCAGCC
GGTGCACACCTCTTCGACTCTCTCGCATCCAGTCCCTTGCAAGTGGATGAACCCGAAATA
TGGCGGACGATCTTGTGATGTCATATTCCACGACATGCATGACTTGGTAAACCACGTGAC
ACGAGATCACGTGGGTGGAATGGATCAGACCGATCACACTTGTTACTGGGAAGATTGTTC
GAGAAAACGAAAATGTTTCAAAGCCAAGTACAAGTTGGTCAACCACATTCGAGTTCACAC
TGGAGAGAAACCTTTTCTCTGTCCTTATCCAGATTGTGGTAAAATGTTCGGTCGAAGCGA
AAATTTAAAGATTCATCAAAGAACTCATACAGGTGAACGACCTTTCCCTTGCAAATTCCC
CGGTTGCGAAAGAAGATTCGCGAATAGTTCCGACCGTAAGAAGCACAGCTACATGCACAA
CACAGAGAAACTGTACACGTGCAAGTATGAAGGATGCGATCGAAGCTACACTCATCCGAG
CTCATTACGTAAGCACATACGTATGCATGAATCCAATGGTGACGTCATCACTTCGTCAAC
ATCACCAACAACGTCATGTGGATCATCTGACTTCGCTTCCTCTCCTGAACACGTCGAACA
ATTCCAAACGTACCCTGCGATATCTGAGCCGATGACATCACAGCCCATGTCGATCAATCC
TCATGTGACGTCATCACCTGATACGTCACCGCCCAAGCTAATGCCATGCGAGATGAACTA
TCCTGGGTTCTCCTACAAGAGGGAATACCAGCACGGGAACTGGCAGACCTTTCCATCTTC
CGATCTACCCGACTTGTACAATCAGCCAGATTATCTTCCTCAAACCTTCCTACCTCCAAC
GCAATTCTCAGTTGTTTAGCTGCGATATTCTTAAGTTGTAAATATTTATCTATTTATCTG
CATTTTTCAATATGCTTTGAAATAAACCATTATTACTCTAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[35-67] 290.0 - T[76-103] 7.5 - T[109-133] 0.0012 - T[139-163] 0.044 - T[169-193] 9.8E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[81-108] 11.24 - T[109-138] 16.623 - T[139-168] 10.408 - T[169-198] 11.281 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[90-146] 2.47E-19 - T[150-194] 4.07E-10 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[111-133] . - T[141-163] . - T[171-193] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 61.081 % | 232 | 1.21E-74 |
| ZIC2_HUMAN | 61.798 % | 234 | 3.37E-73 |
| ZIC3_HUMAN | 60.622 % | 241 | 8.33E-77 |