Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R14.985932-988519.18209.t

Possible name(s)

ARF1; ARF3; SRPRB

Gene model

Cisavi.CG.ENS81.R14.985932-988519

Location

R14 [985,931 / 988,519]

Sequences

Amino acid sequence

Length: 267

>Cisavi.CG.ENS81.R14.985932-988519.18209.p
MDRSCCEIRLEMQSSISFYKSMLDSYGISQNLIGIIGSLILVILTTVIWKLTFGRSAHRT
GILLAGLSDAGKTILFTQLTAGVAKETHTSLKENEAQYLVANNQNKTALTVVDLPGHDAI
RLQYLEKYKDNARGIVFVIDSGTFQKSVKDVAEFLFHILTDKQLNKIAPSVCIACNKQDL
LNSKTKTVIFNQLEKELNTVRKTQSAALSSTAGGTEDSVFLGRKGEDFQFSHLSKFKIEF
LECNAKCSAVDEDVNLNELKSWISSLV

Nucleotide sequence

Length: 1,248

>Cisavi.CG.ENS81.R14.985932-988519.18209.t
GTCAATTTTAATTTTTTGAATGGACAGGTCTTGTTGTGAAATAAGATTAGAAATGCAGTC
GTCGATTTCTTTCTACAAATCCATGTTAGATTCCTATGGAATTTCGCAAAACCTTATTGG
AATTATTGGGAGCCTTATACTTGTCATCTTAACTACAGTAATCTGGAAGTTAACTTTCGG
TCGAAGTGCTCACCGAACTGGCATTTTGCTTGCAGGATTATCTGACGCTGGAAAAACTAT
TTTATTTACTCAGTTGACTGCTGGAGTGGCAAAAGAAACACACACATCTTTAAAGGAAAA
TGAAGCTCAATATTTAGTGGCAAACAACCAGAATAAAACAGCACTTACTGTTGTGGATTT
ACCTGGACATGATGCAATTCGTTTACAATACCTAGAAAAATACAAAGATAATGCAAGGGG
AATAGTGTTCGTTATTGATAGTGGGACATTCCAGAAAAGTGTTAAAGATGTTGCTGAATT
TCTCTTTCACATTCTTACGGACAAGCAGCTGAATAAAATTGCCCCTTCAGTTTGCATTGC
TTGCAATAAGCAAGATCTTTTAAACTCAAAAACGAAAACTGTCATTTTTAATCAGCTGGA
AAAGGAATTAAATACTGTTAGGAAAACACAATCGGCTGCACTTTCCAGCACTGCTGGTGG
CACAGAGGATTCAGTTTTCCTAGGACGTAAAGGAGAGGACTTTCAGTTTAGTCATCTCTC
AAAGTTTAAGATTGAATTTCTTGAATGCAATGCGAAGTGTTCAGCTGTGGATGAAGATGT
TAATCTGAATGAGTTAAAGTCTTGGATTTCTTCGCTTGTGTAAATTCCGTGTGAATTTCG
TGTGTGGTGAACCCAATGGGAGGGTGGTTGGACAATGATTGGATCTAGGTGGCATTTTTG
TTGCAGATACTCGTCCAATTTATTTTCGAACTTAATCTAAGAGTACTTTATTGTTTTTTA
AAAGTTTGCCCCAGATCGTGTTTTAGTAATGAATAGTGTGGGGTGAATTCATTAATTTTT
TTGGATGTGGAAATTGGAAAAAAAGCACAATTTTGTCTCTGGTTGGTATTGGTTCTTTTG
TACTATTTGAGATCTTTTAAGATTTCTCTGGATCGAATTTGTTGTTTTGTTTATTAGAGT
TAATTAAATGTTACAAGCTGTAAAGATTTGAAAAACAGTTTTTATTTTGGAATAAATTTA
GGTTCTAAAAATTCCGAGCTATGCTAGACTTATTGACAAAACCCACGA

InterProScan

PANTHER	SRP_receptor_beta_su (IPR019009) - T[32-266] 8.4E-71
Pfam	SRP_receptor_beta_su (IPR019009) - T[60-234] 1.4E-54
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[62-263] 1.08E-21
CDD	SRP_receptor_beta_su (IPR019009) - T[62-264] 2.0716E-66

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRPRB_HUMAN	46.154 %	204	4.83E-65