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TRANSCRIPT CARD

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  1. Region 'REG00000013'
  2. Transcript 'KH2012:KH.L149.2.v5....'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'Harore.CG.MTP2014.S1...'
  5. Transcript 'Cisavi.CG.ENS81.R14....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R14.549467-560365.17297.t

Possible name(s)

GCC2

Location

R14 [555,068 / 560,365]

Sequences

Amino acid sequence

Length: 441

>Cisavi.CG.ENS81.R14.549467-560365.17297.p
MQENEQQKLDLASQSSDQRMLQEQIVALKSSSARNIDVLERKVHSAQVEVDLLLSEKERL
KHDYESYKVRVHSVLKQQKSKETPPTAPQDTTEINSLKQTLEQIHIKLSESQNILASREG
ELDLLQGDYDRLLRQQQESSDSAVEREARWKSRVKSLQQELASMRKQFADATRRISEQEG
LVSAANQIEISSLKEEHQKTVVLLKEDVAHLERELLKARTDAKHRTEEKPETSTPRKLPI
SPLPHNYHRPALESHPSAVSSVDYRSVTREDGEGEENPDLSSVVSFEQILQSPTQIKSVT
VLSDTVSLSSEVQLKQLESRFEAQSKQLEHLSEVARENEATTARLMDQNRVLKEEIRRLE
KNQERQTSVANLEYLKNVVCKFATLPPCDEKQHLLPVLDTMLKLTPEERQTLETVALGEN
ADEPQAASGWGSYLQRWSGMQ

Nucleotide sequence

Length: 1,941

>Cisavi.CG.ENS81.R14.549467-560365.17297.t
AAATCCGAGATCATTTGCCTGAATGAGAAGATCAATGATGTCCAGGAAGAGAGAAGAGAA
GTTGAAAAGCTGAGAATCGAAGCAGAGGAACGGGTGACGAAAACGAAAGAAGCCCTCGAC
GCCACCAAAGACGAGCTTGAGAAATTACAAAGTGTGGAAAAGGAGTTGAAGATTCAGATT
AAGGAGAAACAAACTCAAGTGCAGAGTTTAATGCAGGAAAATGAACAACAAAAGTTGGAT
CTTGCCTCTCAATCATCGGATCAGCGGATGCTGCAGGAACAGATTGTTGCTCTTAAATCA
TCATCAGCTAGAAACATAGATGTCCTGGAAAGAAAGGTGCACAGCGCACAGGTGGAAGTT
GATTTATTATTGAGTGAAAAAGAGAGGTTAAAACATGATTACGAAAGTTATAAAGTGAGG
GTCCACTCAGTTCTCAAGCAGCAAAAAAGTAAAGAAACACCCCCGACTGCTCCACAGGAT
ACCACTGAAATCAACAGCTTAAAGCAGACATTGGAGCAAATCCACATCAAACTGAGTGAG
TCACAAAACATCTTGGCTTCGAGGGAGGGGGAACTTGACCTGTTGCAGGGGGATTATGAT
CGACTTCTACGTCAGCAGCAGGAGTCCTCCGACAGTGCAGTGGAGCGCGAAGCACGATGG
AAGTCGAGAGTCAAGTCACTGCAGCAGGAGTTGGCCAGCATGAGGAAACAGTTTGCTGAT
GCAACTCGGAGAATTAGTGAGCAGGAAGGTTTGGTCAGTGCTGCTAATCAGATCGAGATT
TCATCTTTGAAAGAGGAACACCAGAAAACCGTCGTCCTTTTAAAAGAAGATGTAGCACAT
CTTGAAAGAGAGTTGCTGAAGGCGAGGACTGATGCAAAACACAGAACGGAAGAGAAACCA
GAAACATCCACTCCAAGAAAACTTCCGATCAGTCCTTTGCCTCATAACTACCACCGACCG
GCGCTAGAGAGCCATCCATCAGCGGTGTCTTCAGTTGACTACCGATCTGTTACAAGGGAG
GACGGAGAAGGCGAAGAAAACCCTGATCTTTCCTCGGTCGTTTCCTTCGAACAAATTTTA
CAATCTCCGACTCAAATCAAATCAGTCACTGTTTTATCTGACACCGTGAGCCTTTCATCC
GAAGTGCAATTGAAACAACTGGAATCTCGCTTTGAGGCGCAATCGAAACAGCTCGAACAT
CTGTCGGAGGTCGCTAGAGAGAACGAAGCCACGACAGCTCGGCTGATGGATCAAAATCGT
GTTTTGAAAGAGGAGATTAGAAGGCTGGAGAAAAACCAGGAAAGGCAAACTTCCGTTGCT
AATCTGGAATATCTGAAAAACGTCGTGTGCAAGTTCGCCACACTGCCACCGTGCGATGAG
AAACAACATCTACTTCCTGTGTTGGACACCATGTTGAAACTAACACCTGAAGAAAGACAA
ACACTTGAAACGGTGGCTCTAGGTGAAAACGCGGATGAACCGCAAGCGGCTTCTGGTTGG
GGCAGTTATCTTCAACGTTGGTCTGGTATGCAATGACGTCACGAATGAAAACTGCGTGTC
ATCGCAAATTTACATTCATGCCTTACAATCTGTTTTATCTTCCGAATGCTAGCTATAATC
GGTTTTGCACTTACTGCTGTTTTACTCGATTTTTTTTTCAAATGTGGTGCGCTATTCCGA
AAAAAACAACACTAGAGACCAAAGAACTTAAACAGGACTATTTTTGTCTGAACTATTATA
ATCTTACACCCGTTATACAGCGGCTACGCATTCCACCGTACTAGTTCATTGATTGAGTCG
TAGCAGTTTCATATAATTAACGACTACAGTTATTGGAAATATTTGGTGGTGCATATTTGT
ATTGGTGATTTTTCTTACTACCACATATTACGAAAGAGTTTTATACATAAATAGATAAAG
CCAATTATACGGAAATAAATA

InterProScan

Pfam
GCC2_Rab_bind (IPR032023) - T[311-368] 2.7E-13
ProSiteProfiles
GRIP_dom (IPR000237) - T[365-415] 13.459
SMART
GRIP_dom (IPR000237) - T[368-415] 5.4E-13
Pfam
GRIP_dom (IPR000237) - T[370-412] 5.3E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RGPD8_HUMAN 48.333 % 107 1.02E-24
RGPD5_HUMAN 50.467 % 106 1.93E-24
GCC2_HUMAN 34.467 % 212 3.5E-60