- Transcript 'Cisavi.CG.ENS81.R1.4...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.4528041-4568356.19673.t
Possible name(s)
SPTB; SPTBN1; SPTBN2
Gene model
Location
R1 [4,529,394 / 4,558,348]
Amino acid sequence
Length: 2,290
>Cisavi.CG.ENS81.R1.4528041-4568356.19673.p
SILDEREAVQKKTFTKWVNSHLVRVSCRIQDLYMDLRDGRSLIKLLEILSGERLPKPTRG
KMRIHCLENTGKALQFLKSKKVHLENMGPHDIVDGNHRLILGLIWTIILRFQIQDISVET
EDNRETRSAKDALLLWCQMKTAGYANVNVHNFNTSWRDGLAFNAIIHKHRPDLIDYDSLK
KSNAMHNLQNAFNVAEQQLGLTKLLDPEDIVVERPDEKSIITYVVTYYHYFSKMKAIAVE
GKRIGKVLDSALESNQMVEKYDSLASDLLDWIEQTIEILNDRTFANSLSGVSAQLAAFNN
YRTAEKPQKFQEKGNLEVLLFTLQSKMRANNQKPYLPKEGKLVSDINKAWEKLEKAEHGR
ELAIRNELIRQERLELLASRFDRKAAMRETWLSENQKLVTQDNFGGDLPAVEAATKKHEA
IETDVKAYEERVQAVVDVASELQREDYHDITRVNQRKDNVLQLWEYLLELLQGRRTRLEL
NVRLQQMFEEMMSLLDWMDDMKGQLANEDLGQHLMGVEDILQKHMLLEQDITVHGDRVKA
IESQSQEFLQPTNDYSACEPSAVEDKVVGVRTTYDQLCKQAADRRAKLDESRRMHLFFAT
MAEEVAWVKEKEQLLNSDDLGRDLTSVHSLLTKQKALEDEMNGRKAMLANAIAVGEDLIS
EDHFASQDIAKHISDINEQWKNLEELAEARNELLRANKLYQFYADTDDVDTWLVDMFRIV
STDDCGRDEPSVLSLLKKHAQVQEELTKYEGVIKALHDEADGLTEKDRESVEVQERLRSV
DSRYKELLDFAKLRKEKLIDARALYKFYGEADTISAWIAEKEQVLENMLVPDNIEDMELV
QHRFEGYENEVNKLAPQVAVVNQMARGLVQTQHPNSDDVSAKQNELNARWNALRALLEER
REILASAKGLHGFKLECDETEGWIKDKARVLAAGAEDQLSDRDLAGVVALQRKLSSMELD
LAAIQAKLDNLRDEADRLSNEHPEEADEIRKKFEQMERVWQELRDMLRQREDSLGEAGNL
QKFLRDLDRFQAWLSTTQTTIASEDMPQSLPEAEKLLQQHQAIKLEIDNYQADYEEIKST
GAQVTSGREDEPQYMFLGQRLQALDQGWIELHKMWENRNHFLNEAKEYQAFIRDCKQAEQ
ILTNQEYALESARRSSAAASTPDSAEEVMKKHEAFVATMASADERVEAVLRDAGKLADAD
HHAADKIKERAEKIAERRAKNKEEAGEVSTMLRDNLALQKFVADCDELSEWVNEKMLTAK
DATYDDARNLHSKWQKHQAFSAELTANKDRLERLEEDGSTLAKSKPEWKDQIDVRLDDLR
KHWEALESCTKTKEKTLFEANKAELFSQTCEDLEKFASMMEEQLNSDDVGKDLASVNVLL
KDHLAQQDEIEVRKQEVQELESQAAVLRSEGDEDVDTMNEERAKIKHRIEDLDEPLTKRK
DALENSKQLHQFYRDVQDEKLWIDEKHPQATSNELGNSLQEVQALQKKHQALRSELTAHE
PVVVAVCHRGVAMATEDNPNTDKINEKCHELQENWNRLLEDVDERKRKLSEAENAQQYFF
DADEAVVLMEEQELYMMSDEKAKDSQGATKMLKKHQAQEQNIDDFADTIQQLSKTCRDLC
EQEHPQSEQLSTRQQQVDQTYAGLKDLAEERRMKLRERCDLFRLSRDIDDLEQWIAQREV
VAASQEQGQDFDHVSMLQDQFNDFQRDTIKTGEERVADAMRMSDELINAGHTDAQDIAGW
KDTIRDAWADLLELIDTRVEMLAAAYALHKFHYDAAEILARIQEKRQEVPEELGRDHDAV
ENFKREHDIFAQDIKAIGAQVEAITSAGSELEGRYAGDDLQEIQKKIEAVLSAWNNLLSL
VKKRAALLSDALNKFRFFNMCRDLMDWMESTVRQIDLQEKPRDVSGVETAMSLHQGTKAE
IDARNGSFEECTQLGQHLITTGHYASDEIRVKLDELGAKRNHVVDRWQEKWELNLLMEVY
QFAHDANTCDAWVQQQLGLIRDMPVDTCRSADDADQLLRRLDGFEKAAVPWEDRFAALEK
LTEVSQEEQEKKRKEEEEQEERRRKAEEDEQKIKKEAELEAARVQAIVDAENPKIQNVNP
EETDAENHRWKTKHNKVDSSEALKLLRKQGRTKPPLKPKRSNGDVGNLMRSQAHSLRMKM
YENRRNRRPSPIPTKDQGNARRIQLFPQTSPDVPYQGFLKRKSTMFSPSKKAPNRSWNSV
FCVLQDKNLAFYKDPKAASQRASFHGEQSISLENATIEIASDYKKRKNVLRLRLSAGMEY
LFQAKDEVSV
Nucleotide sequence
Length: 6,870
>Cisavi.CG.ENS81.R1.4528041-4568356.19673.t
TCCATATTAGATGAGAGAGAAGCTGTGCAAAAGAAGACCTTCACAAAATGGGTGAATTCT
CATCTTGTCCGTGTGTCCTGTCGCATCCAGGATCTATATATGGATCTCAGGGATGGAAGA
TCTCTCATCAAACTTCTGGAGATTCTTTCCGGAGAACGACTGCCCAAACCCACACGTGGA
AAAATGAGGATTCATTGTCTTGAGAACACAGGCAAAGCATTGCAATTCCTTAAGAGCAAG
AAAGTTCATCTGGAAAACATGGGGCCACACGATATTGTGGATGGAAACCACCGTCTTATT
CTTGGCCTCATTTGGACCATTATTCTTAGATTCCAGATCCAAGACATCAGTGTTGAGACA
GAAGACAACCGAGAGACGCGGTCAGCGAAAGATGCATTGTTACTGTGGTGTCAGATGAAG
ACAGCGGGTTATGCCAATGTGAACGTGCATAACTTCAACACAAGCTGGAGAGATGGTCTC
GCATTCAATGCAATCATCCATAAGCACCGCCCAGACCTAATTGACTATGATTCACTAAAG
AAGTCGAATGCTATGCACAACCTTCAAAACGCTTTTAACGTTGCTGAACAGCAGTTGGGA
CTCACCAAACTTCTGGACCCAGAAGATATTGTGGTCGAAAGACCTGATGAGAAATCAATT
ATCACCTATGTTGTTACATACTACCATTACTTCTCTAAAATGAAAGCAATTGCTGTGGAA
GGGAAGAGAATTGGAAAGGTTTTAGACAGCGCGTTGGAAAGCAACCAAATGGTGGAGAAA
TACGATTCACTCGCTTCTGACCTACTCGATTGGATCGAGCAGACAATAGAAATACTAAAC
GACCGAACTTTCGCAAATTCTCTCTCTGGTGTGAGTGCTCAGCTCGCAGCATTCAACAAC
TACCGCACGGCTGAGAAACCACAGAAGTTCCAGGAGAAAGGAAACCTCGAAGTCTTGCTC
TTCACCCTGCAAAGCAAAATGCGAGCCAACAACCAGAAACCTTACTTACCAAAAGAAGGA
AAACTAGTTTCCGATATAAACAAGGCTTGGGAGAAACTGGAAAAAGCGGAGCATGGGCGC
GAGTTGGCAATACGCAACGAACTTATCCGCCAAGAACGACTAGAACTTTTAGCAAGCAGG
TTTGACCGGAAAGCGGCCATGCGTGAAACCTGGTTGAGCGAGAATCAGAAGTTGGTGACG
CAGGATAACTTCGGAGGGGACCTTCCGGCGGTGGAGGCAGCAACAAAGAAGCACGAGGCG
ATCGAAACTGACGTAAAGGCGTATGAGGAGCGAGTTCAGGCTGTTGTCGATGTGGCAAGC
GAACTACAACGCGAGGATTATCATGACATCACTCGTGTCAATCAAAGGAAGGACAATGTG
CTCCAGTTATGGGAGTACCTCCTGGAATTGTTGCAAGGCCGTCGGACGAGACTTGAACTT
AATGTCAGGTTGCAGCAGATGTTTGAAGAAATGATGTCCTTGCTGGACTGGATGGATGAC
ATGAAGGGACAACTTGCAAATGAAGATTTAGGCCAGCACTTGATGGGTGTGGAAGATATC
CTGCAGAAACACATGCTGCTTGAACAAGACATCACCGTGCATGGAGATAGAGTCAAAGCC
ATTGAAAGTCAAAGCCAGGAGTTTTTACAGCCTACAAATGATTACTCCGCATGTGAGCCA
TCAGCAGTGGAAGACAAAGTGGTTGGAGTTCGCACCACATATGACCAACTGTGCAAGCAA
GCCGCTGACCGTAGAGCCAAGCTCGACGAGTCTCGTCGGATGCATCTATTCTTCGCCACC
ATGGCTGAGGAGGTGGCTTGGGTCAAAGAGAAGGAACAACTTCTCAATTCAGACGATCTT
GGCCGAGATCTCACCAGTGTGCACTCGCTACTTACTAAACAAAAGGCATTGGAAGACGAG
ATGAATGGACGGAAAGCGATGTTGGCGAACGCCATCGCGGTCGGTGAGGATCTCATCTCG
GAGGACCACTTCGCATCCCAGGACATCGCTAAACACATCTCGGACATCAATGAGCAGTGG
AAGAACCTGGAAGAACTGGCGGAAGCAAGGAATGAGTTGCTCAGAGCAAACAAACTTTAC
CAGTTTTATGCTGACACTGATGATGTGGACACGTGGTTAGTCGATATGTTTCGAATCGTG
TCAACCGACGATTGTGGCCGTGATGAACCTTCCGTGCTATCCCTGCTCAAGAAACATGCT
CAGGTCCAGGAAGAACTTACTAAGTATGAGGGCGTCATCAAAGCTTTGCATGATGAGGCC
GACGGTCTAACAGAAAAAGATCGAGAATCGGTCGAAGTGCAAGAGAGACTACGCAGTGTG
GATAGCAGATATAAGGAATTACTTGACTTTGCTAAATTGAGGAAGGAAAAACTGATTGAT
GCAAGAGCGTTGTACAAGTTCTATGGTGAAGCGGATACAATTTCGGCATGGATTGCAGAA
AAAGAACAAGTCTTGGAAAATATGTTGGTACCTGATAATATAGAAGATATGGAACTGGTG
CAGCACAGATTCGAAGGTTATGAGAACGAGGTAAACAAGTTGGCGCCCCAAGTGGCCGTT
GTGAACCAGATGGCCCGAGGCCTTGTACAAACCCAACATCCCAATTCGGATGATGTTTCT
GCCAAACAAAATGAATTAAATGCCAGGTGGAACGCATTGCGTGCTTTGCTGGAGGAGAGA
CGTGAGATTCTAGCGTCAGCGAAAGGATTACACGGCTTCAAACTGGAGTGTGATGAAACT
GAGGGTTGGATCAAGGATAAGGCAAGAGTCCTCGCTGCAGGAGCCGAGGATCAGTTATCG
GATCGCGATCTCGCTGGAGTCGTCGCTCTGCAGAGGAAGTTATCGAGCATGGAGCTTGAT
CTTGCAGCTATCCAGGCGAAATTGGACAACCTGCGCGACGAAGCGGATCGCTTGTCGAAC
GAGCATCCCGAGGAGGCGGATGAGATCCGCAAGAAGTTCGAGCAGATGGAGCGAGTCTGG
CAAGAGCTCCGCGACATGTTGAGGCAGAGGGAGGACTCGCTCGGAGAAGCCGGGAATCTT
CAGAAGTTCCTCCGTGATCTTGATCGGTTCCAGGCATGGTTATCCACCACACAAACCACC
ATCGCATCTGAGGATATGCCGCAGTCGCTGCCTGAAGCAGAGAAACTGTTACAGCAACAT
CAAGCCATCAAACTAGAGATTGATAACTACCAGGCTGATTACGAGGAAATAAAGAGCACA
GGAGCGCAAGTGACTTCCGGTCGTGAAGACGAACCTCAATACATGTTCCTCGGTCAGAGG
TTGCAAGCACTCGATCAGGGATGGATTGAGCTGCACAAAATGTGGGAGAATCGGAACCAT
TTCCTCAACGAGGCAAAGGAATACCAAGCGTTTATTCGCGACTGCAAACAGGCAGAGCAG
ATCCTCACTAACCAGGAGTATGCTCTCGAGAGCGCTCGTCGGTCCTCTGCTGCCGCCTCC
ACTCCTGACTCCGCAGAGGAGGTGATGAAGAAGCACGAGGCGTTCGTTGCCACGATGGCG
AGCGCTGACGAGAGGGTCGAGGCGGTCCTCCGTGATGCGGGGAAGCTCGCAGATGCTGAT
CATCATGCGGCCGACAAGATCAAGGAGAGAGCAGAGAAGATCGCAGAGCGGAGAGCGAAG
AATAAAGAGGAGGCGGGAGAAGTCTCAACTATGCTCAGGGATAACCTGGCTCTCCAAAAA
TTCGTGGCCGACTGTGACGAGCTGAGTGAATGGGTGAATGAGAAGATGCTCACAGCAAAA
GATGCCACTTACGATGATGCGAGGAACCTGCATTCAAAGTGGCAGAAACACCAGGCTTTT
TCTGCTGAGTTGACAGCAAACAAGGATCGGTTGGAACGACTGGAAGAGGACGGATCGACG
TTGGCAAAATCGAAGCCGGAATGGAAGGATCAGATCGATGTTCGTCTCGATGATCTCCGC
AAGCACTGGGAGGCACTAGAGAGCTGCACAAAGACGAAAGAGAAGACACTTTTCGAAGCT
AATAAAGCGGAGCTATTCTCACAGACATGCGAGGATCTTGAGAAGTTTGCGTCGATGATG
GAGGAGCAACTGAACTCCGATGATGTTGGGAAGGATCTCGCCAGCGTCAATGTCCTCCTT
AAAGATCATCTTGCTCAACAGGACGAGATCGAAGTCCGGAAACAAGAGGTTCAAGAGCTG
GAAAGCCAAGCGGCAGTCCTGAGATCGGAGGGTGATGAAGATGTGGACACAATGAATGAG
GAGCGAGCGAAGATCAAACATAGAATCGAAGATCTTGATGAACCCCTCACTAAGAGGAAA
GATGCGTTGGAGAACAGCAAGCAGCTTCATCAATTCTACAGAGATGTCCAGGATGAGAAG
TTGTGGATAGATGAGAAACACCCACAAGCAACTTCCAATGAACTTGGGAACTCGCTGCAA
GAAGTACAAGCACTGCAGAAGAAGCACCAGGCACTTCGTAGCGAGCTCACCGCTCACGAG
CCGGTCGTGGTTGCCGTGTGCCATCGTGGGGTTGCCATGGCAACTGAGGATAACCCGAAC
ACCGATAAGATCAACGAGAAGTGCCACGAACTTCAGGAAAATTGGAACAGACTACTTGAA
GATGTGGATGAGAGAAAGAGGAAGCTATCGGAGGCGGAGAACGCTCAGCAATACTTCTTC
GATGCGGATGAAGCTGTGGTATTGATGGAGGAACAGGAGCTTTACATGATGTCTGATGAG
AAAGCCAAGGACTCCCAAGGAGCCACCAAGATGTTGAAGAAGCATCAGGCTCAGGAACAA
AATATTGATGATTTTGCCGACACCATCCAACAGCTTTCCAAGACTTGCAGAGATCTTTGT
GAGCAAGAACATCCACAAAGCGAGCAGTTGTCCACGAGGCAGCAGCAAGTCGATCAGACG
TACGCTGGACTGAAGGACCTCGCAGAAGAGCGGCGGATGAAACTGAGGGAGCGATGCGAT
CTCTTCCGATTATCCCGCGACATTGATGACTTGGAGCAGTGGATCGCGCAGCGAGAGGTG
GTGGCAGCTTCACAAGAGCAAGGCCAGGATTTTGATCACGTGTCGATGCTGCAAGATCAG
TTCAACGACTTCCAACGAGACACGATCAAGACAGGGGAGGAGAGAGTGGCGGATGCGATG
AGGATGTCCGACGAGCTCATCAACGCGGGACACACCGATGCGCAGGACATCGCTGGATGG
AAGGATACGATCCGGGATGCGTGGGCCGATCTGCTGGAGCTCATTGACACAAGGGTGGAG
ATGCTGGCAGCAGCGTACGCGCTCCACAAATTCCACTACGATGCAGCTGAGATCCTCGCG
AGGATCCAAGAGAAGAGACAAGAGGTCCCAGAGGAGCTGGGAAGAGACCATGATGCCGTG
GAGAACTTCAAGCGAGAGCACGACATCTTCGCGCAGGATATCAAGGCCATCGGTGCACAG
GTGGAAGCGATCACTTCTGCAGGGAGCGAGCTGGAGGGCAGGTACGCCGGTGACGATCTG
CAAGAGATCCAGAAGAAGATCGAGGCAGTGCTGAGCGCATGGAACAACCTGCTCTCCCTC
GTGAAGAAGCGGGCAGCCCTGCTCTCCGATGCTCTCAACAAATTCCGCTTCTTCAACATG
TGTCGCGACCTCATGGACTGGATGGAGTCCACCGTGCGCCAGATTGATCTGCAAGAAAAG
CCGAGAGATGTATCTGGCGTCGAAACCGCCATGAGCCTCCACCAGGGCACGAAAGCGGAG
ATCGATGCGAGGAACGGGAGCTTCGAGGAATGCACCCAACTCGGTCAGCACCTCATCACC
ACCGGACATTACGCCAGCGACGAGATTCGGGTGAAACTCGACGAACTTGGTGCCAAACGT
AACCACGTTGTCGACCGTTGGCAGGAAAAATGGGAACTTAACCTGTTAATGGAGGTGTAC
CAGTTTGCTCACGACGCCAACACCTGCGACGCGTGGGTGCAACAACAACTTGGGCTGATC
CGTGACATGCCGGTTGACACGTGTAGGTCGGCTGACGACGCCGACCAGTTGCTCCGACGA
CTCGACGGATTCGAGAAAGCAGCCGTGCCTTGGGAGGATCGATTCGCTGCCCTCGAGAAA
CTCACCGAGGTTTCTCAGGAGGAGCAAGAGAAGAAGAGGAAAGAGGAAGAAGAGCAGGAG
GAGCGGAGGAGGAAAGCGGAAGAAGATGAGCAGAAGATCAAAAAAGAAGCGGAGTTGGAA
GCTGCTCGAGTGCAAGCTATTGTTGATGCTGAGAATCCTAAAATACAGAATGTTAATCCG
GAAGAGACTGATGCAGAAAATCATCGATGGAAAACGAAACACAATAAAGTGGATTCAAGT
GAGGCTCTCAAGTTGCTTCGCAAACAAGGTAGGACCAAACCGCCGTTAAAACCAAAGAGG
TCGAATGGCGACGTTGGCAACCTTATGCGATCGCAAGCTCACAGTTTAAGGATGAAGATG
TATGAGAATCGCAGGAACAGGCGACCTTCTCCTATTCCCACCAAAGACCAGGGAAACGCT
CGTCGAATCCAGCTGTTCCCACAGACCTCTCCCGACGTCCCCTACCAAGGATTTTTGAAG
CGGAAATCCACCATGTTCAGTCCATCTAAAAAGGCACCAAACAGGTCGTGGAACAGCGTG
TTCTGTGTACTGCAGGACAAGAACCTCGCGTTCTACAAAGACCCCAAAGCAGCTTCACAA
AGAGCCTCCTTTCACGGGGAACAATCCATATCTCTGGAAAACGCAACGATTGAGATTGCG
AGCGACTACAAGAAACGAAAGAACGTTTTGCGACTCCGTCTTTCAGCGGGCATGGAGTAC
CTCTTTCAAGCGAAGGATGAAGTAAGTGTG
| PIRSF |
Spectrin_bsu (IPR016343) - T[1-2290] 0.0 |
| Gene3D |
CH_dom_sf (IPR036872) - T[1-117] 3.6E-47 - T[118-238] 2.0E-48 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[4-233] 1.04E-87 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[8-112] 17.489 - T[127-229] 16.164 |
| Pfam |
CH-domain (IPR001715) - T[9-112] 6.9E-22 - T[128-232] 1.2E-26 |
| CDD |
CH-domain (IPR001715) - T[9-112] 2.17358E-22 - T[128-231] 4.96605E-26 |
| SMART |
CH-domain (IPR001715) - T[10-110] 1.2E-25 - T[129-227] 1.9E-24 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[10-19] . - T[84-108] . |
| Pfam |
Spectrin_repeat (IPR002017) - T[257-364] 3.4E-11 - T[378-479] 1.2E-17 - T[483-590] 1.0E-18 - T[593-695] 7.4E-22 - T[698-798] 1.7E-16 - T[803-904] 3.1E-19 - T[910-1016] 7.1E-14 - T[1019-1123] 4.5E-17 - T[1127-1219] 5.9E-9 - T[1237-1338] 5.0E-16 - T[1342-1445] 1.9E-12 - T[1447-1551] 2.9E-24 - T[1554-1657] 1.2E-13 - T[1661-1762] 1.1E-15 - T[1767-1869] 6.1E-15 - T[1875-1972] 8.8E-17 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[259-365] 1.7 - T[379-479] 1.1E-24 - T[485-589] 9.4E-23 - T[595-695] 1.6E-28 - T[700-799] 4.0E-23 - T[805-905] 5.2E-26 - T[911-1015] 9.6E-17 - T[1021-1123] 5.6E-21 - T[1129-1233] 2.2E-13 - T[1239-1338] 1.1E-17 - T[1344-1444] 5.6E-17 - T[1450-1550] 1.8E-31 - T[1556-1656] 6.1E-22 - T[1662-1763] 1.0E-17 - T[1769-1869] 1.7E-19 - T[1875-1975] 7.6E-18 - T[1980-2085] 5.8 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[2189-2290] 3.6E-28 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[2192-2290] 10.509 |
| PRINTS |
PH_dom-spectrin-type (IPR001605) - T[2195-2214] 2.1E-18 - T[2215-2236] 2.1E-18 - T[2257-2274] 2.1E-18 - T[2277-2290] 2.1E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPTN2_HUMAN | 48.783 % | 2110 | 0 |
| SPTB1_HUMAN | 50.412 % | 2032 | 0 |
| SPTN4_HUMAN | 43.774 % | 1639 | 0 |