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- Transcript 'KH2012:KH.C9.252.v1....' >
- Transcript 'Cisavi.CG.ENS81.R1.4...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.4528041-4568356.19672.t
Possible name(s)
SPTB; SPTBN1; SPTBN2
Gene model
Location
R1 [4,529,394 / 4,558,354]
Amino acid sequence
Length: 2,263
>Cisavi.CG.ENS81.R1.4528041-4568356.19672.p
FPSILDEREAVQKKTFTKWVNSHLVRVSCRIQDLYMDLRDGRSLIKLLEILSGERLPKPT
RGKMRIHCLENTGKALQFLKSKKVHLENMGPHDIVDGNHRLILGLIWTIILRFQIQDISV
ETEDNRETRSAKDALLLWCQMKTAGYANVNVHNFNTSWRDGLAFNAIIHKHRPDLIDYDS
LKKSNAMHNLQNAFNVAEQQLGLTKLLDPEDIVVERPDEKSIITYVVTYYHYFSKMKAIA
VEGKRIGKVLDSALESNQMVEKYDSLASDLLDWIEQTIEILNDRTFANSLSGVSAQLAAF
NNYRTAEKPQKFQEKGNLEVLLFTLQSKMRANNQKPYLPKEGKLVSDINKAWEKLEKAEH
GRELAIRNELIRQERLELLASRFDRKAAMRETWLSENQKLVTQDNFGGDLPAVEAATKKH
EAIETDVKAYEERVQAVVDVASELQREDYHDITRVNQRKDNVLQLWEYLLELLQGRRTRL
ELNVRLQQMFEEMMSLLDWMDDMKGQLANEDLGQHLMGVEDILQKHMLLEQDITVHGDRV
KAIESQSQEFLQPTNDYSACEPSAVEDKVVGVRTTYDQLCKQAADRRAKLDESRRMHLFF
ATMAEEVAWVKEKEQLLNSDDLGRDLTSVHSLLTKQKALEDEMNGRKAMLANAIAVGEDL
ISEDHFASQDIAKHISDINEQWKNLEELAEARNELLKESKLYQFYADTDDVDTWLVDMFR
IVSTDDCGRDEPSVLSLLKKHAQVQEELTKYEGVIKALHDEADGLTEKDRESVEVQERLR
SVDSRYKELLDFAKLRKEKLIDARALYKFYGEADTISAWIAEKEQVLENMLVPDNIEDME
LVQHRFEGYENEVNKLAPQVAVVNQMARGLVQTQHPNSDDVSAKQNELNARWNALRALLE
ERREILASAKGLHGFKLECDETEGWIKDKARVLAAGAEDQLSDRDLAGVVALQRKLSSME
LDLAAIQAKLDNLRDEADRLSNEHPEEADEIRKKFEQMERVWQELRDMLRQREDSLGEAG
NLQKFLRDLDRFQAWLSTTQTTIASEDMPQSLPEAEKLLQQHQAIKLEIDNYQADYEEIK
STGAQVTSGREDEPQYMFLGQRLQALDQGWIELHKMWENRNHFLNEAKEYQAFIRDCKQA
EQILTNQEYALESARRSSAAASTPDSAEEVMKKHEAFVATMASADERVEAVLRDAGKLAD
ADHHAADKIKERAEKIAERRAKNKEEAGEVSTMLRDNLALQKFVADCDELSEWVNEKMLT
AKDATYDDARNLHSKWQKHQAFSAELTANKDRLERLEEDGSTLAKSKPEWKDQIDVRLDD
LRKHWEALESCTKTKEKTLFEANKAELFSQTCEDLEKFASMMEEQLNSDDVGKDLASVNV
LLKDHLAQQDEIEVRKQEVQELESQAAVLRSEGDEDVDTMNEERAKIKHRIEDLDEPLTK
RKDALENSKQLHQFYRDVQDEKLWIDEKHPQATSNELGNSLQEVQALQKKHQALRSELTA
HEPVVVAVCHRGVAMATEDNPNTDKINEKCHELQENWNRLLEDVDERKRKLSEAENAQQY
FFDADEAVVLMEEQELYMMSDEKAKDSQGATKMLKKHQAQEQNIDDFADTIQQLSKTCRD
LCEQEHPQSEQLSTRQQQVDQTYAGLKDLAEERRMKLRERCDLFRLSRDIDDLEQWIAQR
EVVAASQEQGQDFDHVSMLQDQFNDFQRDTIKTGEERVADAMRMSDELINAGHTDAQDIA
GWKDTIRDAWADLLELIDTRVEMLAAAYALHKFHYDAAEILARIQEKRQEVPEELGRDHD
AVENFKREHDIFAQDIKAIGAQVEAITSAGSELEGRYAGDDLQEIQKKIEAVLSAWNNLL
SLVKKRAALLSDALNKFRFFNMCRDLMDWMESTVRQIDLQEKPRDVSGVETAMSLHQGTK
AEIDARNGSFEECTQLGQHLITTGHYASDEIRVKLDELGAKRNHVVDRWQEKWELNLLME
VYQFAHDANTCDAWVQQQLGLIRDMPVDTCRSADDADQLLRRLDGFEKAAVPWEDRFAAL
EKLTEVSQEEQEKKRKEEEEQEERRRKAEEDEQKIKKEAELEAARPRRRFASNRSTHGDH
STPFVHADDVMVPRRRLFSNQQVLTHKVVASVHSDINGPRVSGAQYTQTPVKMRQKAPQD
SESPDVPYQGFLKRKSTMFSPSKKAPNRSWNSVFCVLQDKNLAFYKDPKAASQRASFHGE
QSISLENATIEIASDYKKRKNVLRLRLSAGMEYLFQAKDEVSV
Nucleotide sequence
Length: 6,789
>Cisavi.CG.ENS81.R1.4528041-4568356.19672.t
TTTCCTTCCATATTAGATGAGAGAGAAGCTGTGCAAAAGAAGACCTTCACAAAATGGGTG
AATTCTCATCTTGTCCGTGTGTCCTGTCGCATCCAGGATCTATATATGGATCTCAGGGAT
GGAAGATCTCTCATCAAACTTCTGGAGATTCTTTCCGGAGAACGACTGCCCAAACCCACA
CGTGGAAAAATGAGGATTCATTGTCTTGAGAACACAGGCAAAGCATTGCAATTCCTTAAG
AGCAAGAAAGTTCATCTGGAAAACATGGGGCCACACGATATTGTGGATGGAAACCACCGT
CTTATTCTTGGCCTCATTTGGACCATTATTCTTAGATTCCAGATCCAAGACATCAGTGTT
GAGACAGAAGACAACCGAGAGACGCGGTCAGCGAAAGATGCATTGTTACTGTGGTGTCAG
ATGAAGACAGCGGGTTATGCCAATGTGAACGTGCATAACTTCAACACAAGCTGGAGAGAT
GGTCTCGCATTCAATGCAATCATCCATAAGCACCGCCCAGACCTAATTGACTATGATTCA
CTAAAGAAGTCGAATGCTATGCACAACCTTCAAAACGCTTTTAACGTTGCTGAACAGCAG
TTGGGACTCACCAAACTTCTGGACCCAGAAGATATTGTGGTCGAAAGACCTGATGAGAAA
TCAATTATCACCTATGTTGTTACATACTACCATTACTTCTCTAAAATGAAAGCAATTGCT
GTGGAAGGGAAGAGAATTGGAAAGGTTTTAGACAGCGCGTTGGAAAGCAACCAAATGGTG
GAGAAATACGATTCACTCGCTTCTGACCTACTCGATTGGATCGAGCAGACAATAGAAATA
CTAAACGACCGAACTTTCGCAAATTCTCTCTCTGGTGTGAGTGCTCAGCTCGCAGCATTC
AACAACTACCGCACGGCTGAGAAACCACAGAAGTTCCAGGAGAAAGGAAACCTCGAAGTC
TTGCTCTTCACCCTGCAAAGCAAAATGCGAGCCAACAACCAGAAACCTTACTTACCAAAA
GAAGGAAAACTAGTTTCCGATATAAACAAGGCTTGGGAGAAACTGGAAAAAGCGGAGCAT
GGGCGCGAGTTGGCAATACGCAACGAACTTATCCGCCAAGAACGACTAGAACTTTTAGCA
AGCAGGTTTGACCGGAAAGCGGCCATGCGTGAAACCTGGTTGAGCGAGAATCAGAAGTTG
GTGACGCAGGATAACTTCGGAGGGGACCTTCCGGCGGTGGAGGCAGCAACAAAGAAGCAC
GAGGCGATCGAAACTGACGTAAAGGCGTATGAGGAGCGAGTTCAGGCTGTTGTCGATGTG
GCAAGCGAACTACAACGCGAGGATTATCATGACATCACTCGTGTCAATCAAAGGAAGGAC
AATGTGCTCCAGTTATGGGAGTACCTCCTGGAATTGTTGCAAGGCCGTCGGACGAGACTT
GAACTTAATGTCAGGTTGCAGCAGATGTTTGAAGAAATGATGTCCTTGCTGGACTGGATG
GATGACATGAAGGGACAACTTGCAAATGAAGATTTAGGCCAGCACTTGATGGGTGTGGAA
GATATCCTGCAGAAACACATGCTGCTTGAACAAGACATCACCGTGCATGGAGATAGAGTC
AAAGCCATTGAAAGTCAAAGCCAGGAGTTTTTACAGCCTACAAATGATTACTCCGCATGT
GAGCCATCAGCAGTGGAAGACAAAGTGGTTGGAGTTCGCACCACATATGACCAACTGTGC
AAGCAAGCCGCTGACCGTAGAGCCAAGCTCGACGAGTCTCGTCGGATGCATCTATTCTTC
GCCACCATGGCTGAGGAGGTGGCTTGGGTCAAAGAGAAGGAACAACTTCTCAATTCAGAC
GATCTTGGCCGAGATCTCACCAGTGTGCACTCGCTACTTACTAAACAAAAGGCATTGGAA
GACGAGATGAATGGACGGAAAGCGATGTTGGCGAACGCCATCGCGGTCGGTGAGGATCTC
ATCTCGGAGGACCACTTCGCATCCCAGGACATCGCTAAACACATCTCGGACATCAATGAG
CAGTGGAAGAACCTGGAAGAACTGGCGGAAGCAAGGAATGAGTTGCTCAAAGAGAGCAAA
CTTTACCAGTTTTATGCTGACACTGATGATGTGGACACGTGGTTAGTCGATATGTTTCGA
ATCGTGTCAACCGACGATTGTGGCCGTGATGAACCTTCCGTGCTATCCCTGCTCAAGAAA
CATGCTCAGGTCCAGGAAGAACTTACTAAGTATGAGGGCGTCATCAAAGCTTTGCATGAT
GAGGCCGACGGTCTAACAGAAAAAGATCGAGAATCGGTCGAAGTGCAAGAGAGACTACGC
AGTGTGGATAGCAGATATAAGGAATTACTTGACTTTGCTAAATTGAGGAAGGAAAAACTG
ATTGATGCAAGAGCGTTGTACAAGTTCTATGGTGAAGCGGATACAATTTCGGCATGGATT
GCAGAAAAAGAACAAGTCTTGGAAAATATGTTGGTACCTGATAATATAGAAGATATGGAA
CTGGTGCAGCACAGATTCGAAGGTTATGAGAACGAGGTAAACAAGTTGGCGCCCCAAGTG
GCCGTTGTGAACCAGATGGCCCGAGGCCTTGTACAAACCCAACATCCCAATTCGGATGAT
GTTTCTGCCAAACAAAATGAATTAAATGCCAGGTGGAACGCATTGCGTGCTTTGCTGGAG
GAGAGACGTGAGATTCTAGCGTCAGCGAAAGGATTACACGGCTTCAAACTGGAGTGTGAT
GAAACTGAGGGTTGGATCAAGGATAAGGCAAGAGTCCTCGCTGCAGGAGCCGAGGATCAG
TTATCGGATCGCGATCTCGCTGGAGTCGTCGCTCTGCAGAGGAAGTTATCGAGCATGGAG
CTTGATCTTGCAGCTATCCAGGCGAAATTGGACAACCTGCGCGACGAAGCGGATCGCTTG
TCGAACGAGCATCCCGAGGAGGCGGATGAGATCCGCAAGAAGTTCGAGCAGATGGAGCGA
GTCTGGCAAGAGCTCCGCGACATGTTGAGGCAGAGGGAGGACTCGCTCGGAGAAGCCGGG
AATCTTCAGAAGTTCCTCCGTGATCTTGATCGGTTCCAGGCATGGTTATCCACCACACAA
ACCACCATCGCATCTGAGGATATGCCGCAGTCGCTGCCTGAAGCAGAGAAACTGTTACAG
CAACATCAAGCCATCAAACTAGAGATTGATAACTACCAGGCTGATTACGAGGAAATAAAG
AGCACAGGAGCGCAAGTGACTTCCGGTCGTGAAGACGAACCTCAATACATGTTCCTCGGT
CAGAGGTTGCAAGCACTCGATCAGGGATGGATTGAGCTGCACAAAATGTGGGAGAATCGG
AACCATTTCCTCAACGAGGCAAAGGAATACCAAGCGTTTATTCGCGACTGCAAACAGGCA
GAGCAGATCCTCACTAACCAGGAGTATGCTCTCGAGAGCGCTCGTCGGTCCTCTGCTGCC
GCCTCCACTCCTGACTCCGCAGAGGAGGTGATGAAGAAGCACGAGGCGTTCGTTGCCACG
ATGGCGAGCGCTGACGAGAGGGTCGAGGCGGTCCTCCGTGATGCGGGGAAGCTCGCAGAT
GCTGATCATCATGCGGCCGACAAGATCAAGGAGAGAGCAGAGAAGATCGCAGAGCGGAGA
GCGAAGAATAAAGAGGAGGCGGGAGAAGTCTCAACTATGCTCAGGGATAACCTGGCTCTC
CAAAAATTCGTGGCCGACTGTGACGAGCTGAGTGAATGGGTGAATGAGAAGATGCTCACA
GCAAAAGATGCCACTTACGATGATGCGAGGAACCTGCATTCAAAGTGGCAGAAACACCAG
GCTTTTTCTGCTGAGTTGACAGCAAACAAGGATCGGTTGGAACGACTGGAAGAGGACGGA
TCGACGTTGGCAAAATCGAAGCCGGAATGGAAGGATCAGATCGATGTTCGTCTCGATGAT
CTCCGCAAGCACTGGGAGGCACTAGAGAGCTGCACAAAGACGAAAGAGAAGACACTTTTC
GAAGCTAATAAAGCGGAGCTATTCTCACAGACATGCGAGGATCTTGAGAAGTTTGCGTCG
ATGATGGAGGAGCAACTGAACTCCGATGATGTTGGGAAGGATCTCGCCAGCGTCAATGTC
CTCCTTAAAGATCATCTTGCTCAACAGGACGAGATCGAAGTCCGGAAACAAGAGGTTCAA
GAGCTGGAAAGCCAAGCGGCAGTCCTGAGATCGGAGGGTGATGAAGATGTGGACACAATG
AATGAGGAGCGAGCGAAGATCAAACATAGAATCGAAGATCTTGATGAACCCCTCACTAAG
AGGAAAGATGCGTTGGAGAACAGCAAGCAGCTTCATCAATTCTACAGAGATGTCCAGGAT
GAGAAGTTGTGGATAGATGAGAAACACCCACAAGCAACTTCCAATGAACTTGGGAACTCG
CTGCAAGAAGTACAAGCACTGCAGAAGAAGCACCAGGCACTTCGTAGCGAGCTCACCGCT
CACGAGCCGGTCGTGGTTGCCGTGTGCCATCGTGGGGTTGCCATGGCAACTGAGGATAAC
CCGAACACCGATAAGATCAACGAGAAGTGCCACGAACTTCAGGAAAATTGGAACAGACTA
CTTGAAGATGTGGATGAGAGAAAGAGGAAGCTATCGGAGGCGGAGAACGCTCAGCAATAC
TTCTTCGATGCGGATGAAGCTGTGGTATTGATGGAGGAACAGGAGCTTTACATGATGTCT
GATGAGAAAGCCAAGGACTCCCAAGGAGCCACCAAGATGTTGAAGAAGCATCAGGCTCAG
GAACAAAATATTGATGATTTTGCCGACACCATCCAACAGCTTTCCAAGACTTGCAGAGAT
CTTTGTGAGCAAGAACATCCACAAAGCGAGCAGTTGTCCACGAGGCAGCAGCAAGTCGAT
CAGACGTACGCTGGACTGAAGGACCTCGCAGAAGAGCGGCGGATGAAACTGAGGGAGCGA
TGCGATCTCTTCCGATTATCCCGCGACATTGATGACTTGGAGCAGTGGATCGCGCAGCGA
GAGGTGGTGGCAGCTTCACAAGAGCAAGGCCAGGATTTTGATCACGTGTCGATGCTGCAA
GATCAGTTCAACGACTTCCAACGAGACACGATCAAGACAGGGGAGGAGAGAGTGGCGGAT
GCGATGAGGATGTCCGACGAGCTCATCAACGCGGGACACACCGATGCGCAGGACATCGCT
GGATGGAAGGATACGATCCGGGATGCGTGGGCCGATCTGCTGGAGCTCATTGACACAAGG
GTGGAGATGCTGGCAGCAGCGTACGCGCTCCACAAATTCCACTACGATGCAGCTGAGATC
CTCGCGAGGATCCAAGAGAAGAGACAAGAGGTCCCAGAGGAGCTGGGAAGAGACCATGAT
GCCGTGGAGAACTTCAAGCGAGAGCACGACATCTTCGCGCAGGATATCAAGGCCATCGGT
GCACAGGTGGAAGCGATCACTTCTGCAGGGAGCGAGCTGGAGGGCAGGTACGCCGGTGAC
GATCTGCAAGAGATCCAGAAGAAGATCGAGGCAGTGCTGAGCGCATGGAACAACCTGCTC
TCCCTCGTGAAGAAGCGGGCAGCCCTGCTCTCCGATGCTCTCAACAAATTCCGCTTCTTC
AACATGTGTCGCGACCTCATGGACTGGATGGAGTCCACCGTGCGCCAGATTGATCTGCAA
GAAAAGCCGAGAGATGTATCTGGCGTCGAAACCGCCATGAGCCTCCACCAGGGCACGAAA
GCGGAGATCGATGCGAGGAACGGGAGCTTCGAGGAATGCACCCAACTCGGTCAGCACCTC
ATCACCACCGGACATTACGCCAGCGACGAGATTCGGGTGAAACTCGACGAACTTGGTGCC
AAACGTAACCACGTTGTCGACCGTTGGCAGGAAAAATGGGAACTTAACCTGTTAATGGAG
GTGTACCAGTTTGCTCACGACGCCAACACCTGCGACGCGTGGGTGCAACAACAACTTGGG
CTGATCCGTGACATGCCGGTTGACACGTGTAGGTCGGCTGACGACGCCGACCAGTTGCTC
CGACGACTCGACGGATTCGAGAAAGCAGCCGTGCCTTGGGAGGATCGATTCGCTGCCCTC
GAGAAACTCACCGAGGTTTCTCAGGAGGAGCAAGAGAAGAAGAGGAAAGAGGAAGAAGAG
CAGGAGGAGCGGAGGAGGAAAGCGGAAGAAGATGAGCAGAAGATCAAAAAAGAAGCGGAG
TTGGAAGCTGCTCGACCGAGAAGAAGGTTTGCTTCAAACAGATCAACTCATGGTGACCAC
TCGACCCCTTTCGTGCATGCTGATGATGTCATGGTGCCACGGAGACGCTTATTCAGCAAT
CAACAAGTGCTGACTCACAAAGTGGTCGCCTCTGTGCATTCCGATATCAACGGACCACGT
GTCTCTGGTGCGCAATACACCCAGACACCTGTTAAAATGCGCCAGAAAGCGCCACAAGAT
TCTGAGTCTCCCGACGTCCCCTACCAAGGATTTTTGAAGCGGAAATCCACCATGTTCAGT
CCATCTAAAAAGGCACCAAACAGGTCGTGGAACAGCGTGTTCTGTGTACTGCAGGACAAG
AACCTCGCGTTCTACAAAGACCCCAAAGCAGCTTCACAAAGAGCCTCCTTTCACGGGGAA
CAATCCATATCTCTGGAAAACGCAACGATTGAGATTGCGAGCGACTACAAGAAACGAAAG
AACGTTTTGCGACTCCGTCTTTCAGCGGGCATGGAGTACCTCTTTCAAGCGAAGGATGAA
GTAAGTGTG
| PIRSF |
Spectrin_bsu (IPR016343) - T[2-2263] 0.0 |
| Gene3D |
CH_dom_sf (IPR036872) - T[3-119] 3.5E-47 - T[120-240] 2.0E-48 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[5-232] 8.35E-88 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[10-114] 17.489 - T[129-231] 16.164 |
| CDD |
CH-domain (IPR001715) - T[11-114] 1.66798E-22 - T[130-233] 3.63055E-26 |
| Pfam |
CH-domain (IPR001715) - T[11-114] 6.8E-22 - T[130-234] 1.2E-26 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[12-21] . - T[86-110] . |
| SMART |
CH-domain (IPR001715) - T[12-112] 1.2E-25 - T[131-229] 1.9E-24 |
| Pfam |
Spectrin_repeat (IPR002017) - T[259-366] 3.4E-11 - T[380-481] 1.1E-17 - T[485-592] 9.9E-19 - T[595-698] 9.9E-22 - T[700-800] 2.3E-16 - T[805-906] 3.0E-19 - T[912-1018] 7.0E-14 - T[1021-1125] 4.4E-17 - T[1129-1221] 5.5E-9 - T[1239-1340] 4.9E-16 - T[1344-1447] 1.9E-12 - T[1449-1553] 2.9E-24 - T[1556-1659] 1.2E-13 - T[1663-1764] 1.1E-15 - T[1769-1871] 6.0E-15 - T[1877-1974] 8.7E-17 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[261-367] 1.7 - T[381-481] 1.1E-24 - T[487-591] 9.4E-23 - T[597-697] 1.3E-28 - T[702-801] 4.0E-23 - T[807-907] 5.2E-26 - T[913-1017] 9.6E-17 - T[1023-1125] 5.6E-21 - T[1131-1235] 2.2E-13 - T[1241-1340] 1.1E-17 - T[1346-1446] 5.6E-17 - T[1452-1552] 1.8E-31 - T[1558-1658] 6.1E-22 - T[1664-1765] 1.0E-17 - T[1771-1871] 1.7E-19 - T[1877-1977] 7.6E-18 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[2160-2263] 2.9E-28 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[2165-2263] 10.509 |
| PRINTS |
PH_dom-spectrin-type (IPR001605) - T[2168-2187] 2.1E-18 - T[2188-2209] 2.1E-18 - T[2230-2247] 2.1E-18 - T[2250-2263] 2.1E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPTB2_HUMAN | 54.662 % | 2465 | 0 |
| SPTN2_HUMAN | 48.821 % | 2102 | 0 |
| SPTB1_HUMAN | 50.364 % | 2031 | 0 |