- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.S837.1.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S726...' >
- Transcript 'Cisavi.CG.ENS81.R14....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R14.33834-40555.15791.t
Possible name(s)
AHI1; WDR44; WDR5
Gene model
Location
R14 [33,833 / 40,555]
Amino acid sequence
Length: 508
>Cisavi.CG.ENS81.R14.33834-40555.15791.p
QEILSTVIVRNLDTGQTMPLSVAAEQVSQCLNPLALQIMSRTKEFACAGSEDTPVTSFKK
SFPDGNRKVRTRSKRFKRLLGKSARRVKEVAESQVERAVHKVKHGKPDGSNSESLNVSSD
EEVSDSLANSSVKIKASSTNKGPYQFNGLKQVQDIAVHVGAVWSMKFIQHSCVPQPHGQN
NVIWVWVLKDYYAYFNEMRSKYVNKERGAVFATPPRNSMEPPTHEPPKLPPDNGGSRYES
SDQLDEEEEAPFRSLPFSSYVGHSADVLDLAWSKNYFTLSSSMDKTVRLWHVSQKECLCC
FQHIDFVTAISFHPRDDRYFLSGSLDSKLRLWNIPEKKVALWNESSSGGALITTVNFCEN
GKFAVCGTYDGRCLFYDTEHLKYHTQIHVRSSRGRNTKGHKITGIEPLPSEHKILVTSND
SRVRLYDLRDLSLTCKYKGLTNMSSQIKASFSHDCKYIVCGSEDKSVYIWKTNLPQDVTK
FRRDRNDCWESIRAHDAVVTCAIFAPYP
Nucleotide sequence
Length: 1,709
>Cisavi.CG.ENS81.R14.33834-40555.15791.t
CAGGAAATTTTGTCAACGGTTATCGTACGTAATCTGGATACAGGGCAAACGATGCCACTA
AGTGTTGCAGCTGAGCAGGTTTCACAATGTTTGAATCCACTTGCTTTGCAAATAATGAGC
CGAACCAAAGAGTTCGCGTGCGCTGGTTCCGAGGATACGCCGGTGACTTCTTTTAAGAAA
AGTTTCCCGGATGGAAATCGTAAAGTACGAACAAGAAGCAAAAGATTCAAGAGACTGTTG
GGAAAAAGTGCTCGTCGTGTTAAAGAGGTCGCCGAGAGCCAGGTAGAGCGCGCCGTGCAC
AAAGTGAAGCACGGCAAGCCCGATGGTTCGAACAGCGAATCACTCAATGTGTCGAGCGAC
GAGGAAGTTTCGGATTCACTCGCCAACTCCTCGGTCAAAATAAAAGCGTCGTCAACTAAT
AAAGGGCCGTACCAGTTCAACGGGCTGAAGCAAGTGCAAGACATAGCTGTGCACGTGGGT
GCAGTGTGGAGCATGAAGTTTATACAGCACTCCTGTGTCCCACAGCCACACGGCCAGAAT
AATGTGATATGGGTGTGGGTGCTGAAGGATTACTATGCATATTTCAACGAAATGAGAAGC
AAATATGTGAACAAAGAGCGTGGGGCTGTATTTGCCACTCCGCCCCGTAACTCAATGGAA
CCCCCAACCCATGAACCCCCTAAACTGCCCCCTGATAATGGAGGGTCAAGATACGAGAGC
TCAGATCAACTTGATGAGGAGGAGGAGGCCCCGTTTCGATCTCTTCCATTCTCATCTTAT
GTGGGGCACTCCGCAGATGTCCTTGACTTGGCGTGGTCCAAGAATTACTTCACTCTATCC
TCATCTATGGACAAGACTGTCAGGTTATGGCATGTGTCACAGAAAGAATGTTTGTGTTGC
TTCCAGCACATCGACTTTGTTACTGCTATTTCATTTCACCCAAGGGACGACCGTTATTTT
CTGAGTGGTTCATTGGACAGCAAACTGCGTTTGTGGAATATTCCGGAGAAGAAAGTTGCT
CTTTGGAATGAGTCATCCAGCGGTGGTGCATTGATAACCACCGTGAACTTCTGTGAGAAC
GGGAAGTTTGCCGTGTGTGGGACGTACGATGGGAGGTGTCTTTTCTACGATACCGAGCAC
CTGAAGTATCACACTCAAATCCATGTGCGATCGTCAAGAGGCAGAAACACCAAGGGCCAT
AAAATCACTGGAATTGAACCTTTACCTTCCGAGCACAAAATACTGGTGACATCCAATGAC
TCCAGAGTGCGATTATATGATTTACGAGATTTGTCTTTAACGTGCAAGTATAAAGGACTC
ACAAACATGAGCAGTCAAATTAAAGCAAGTTTCAGTCATGACTGCAAGTACATAGTATGT
GGTTCCGAAGATAAGTCGGTTTATATCTGGAAGACGAACTTACCTCAGGATGTTACCAAG
TTTCGAAGAGATCGCAATGATTGTTGGGAAAGCATCCGAGCTCACGATGCTGTAGTAACA
TGTGCGATATTTGCTCCATACCCCCCATCTGATGGCTCGGAGTGAAGATAGCTCTGATGG
CAGCCGATTGTCATTTTCGTTGAAATCTCGCACGTCAACAAGTGCAGACAACTGTTGTAT
TATTTCTGCCGATTTTAAAGGCGTCATAAAAATCTTTATGAATTCCTAGCATATTTCTAT
GATTCATCTTTTCTTATTGTGTACAAGTA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[145-507] 1.3E-50 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[148-190] 1.58E-45 - T[254-506] 1.58E-45 |
| SMART |
WD40_repeat (IPR001680) - T[253-291] 6.7E-5 - T[294-333] 9.0E-8 - T[335-377] 3.9 - T[385-427] 15.0 - T[430-471] 0.19 |
| Pfam |
WD40_repeat (IPR001680) - T[257-290] 4.6E-5 - T[296-333] 0.0045 - T[450-471] 0.0056 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[260-480] 19.459 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[260-293] 11.077 - T[300-334] 11.11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 28.571 % | 84.7 | 5.99E-18 |
| WDR5B_HUMAN | 28.571 % | 81.3 | 8.19E-17 |
| WDR44_HUMAN | 56.311 % | 565 | 0 |