Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R143.1489632-1498102.04378.t

Possible name(s)

RRP7A

Gene model

Cisavi.CG.ENS81.R143.1489632-1498102

Location

R143 [1,489,631 / 1,498,102]

Sequences

Amino acid sequence

Length: 260

>Cisavi.CG.ENS81.R143.1489632-1498102.04378.p
MSKIEVFQMKIVADKSCTTGHTLFLHDNYPNKKDDEYCILVTNIPPYCDEHCLHRLFEGC
GKILSLKFTKQARKPKTTENTSKFFPSAPVEGFKMAYITYDCTEAVEKALKKSKLDEIHY
LSSESTKLITGLRKWCLDYVRNQPDPVKMQMEIDEYMAEFDAKVKKEQEVELANEGIPDE
EGWVKVTTRGRNPGVSRTEANQTRIRRKEKQKRKEKEMLSIYKYQVRESKREQIANLRKK
FEEDKLKIKNLKESRKFRPF

Nucleotide sequence

Length: 961

>Cisavi.CG.ENS81.R143.1489632-1498102.04378.t
ATGACGTAGGGTTAAAATAAATGTGAGTACCGATTTATCGAAACAACGTGTGGGTAGTAA
ACCAAAAACATGTCGAAGATAGAAGTTTTTCAGATGAAAATCGTAGCAGATAAGTCCTGC
ACTACCGGTCATACTTTGTTTCTTCATGATAACTACCCAAATAAGAAAGATGACGAATAC
TGTATATTGGTTACCAATATACCGCCATACTGTGATGAGCATTGCTTGCATCGTCTTTTC
GAGGGCTGTGGGAAGATTTTAAGCTTAAAATTCACAAAACAAGCAAGAAAACCGAAGACG
ACGGAAAATACGTCAAAGTTCTTTCCTTCCGCTCCGGTGGAGGGGTTTAAGATGGCGTAT
ATTACCTATGATTGCACAGAAGCGGTTGAAAAAGCTTTAAAAAAGTCGAAATTGGACGAA
ATTCACTATCTTTCATCAGAATCCACAAAATTGATCACAGGATTAAGAAAATGGTGTTTA
GATTACGTCCGAAATCAGCCTGACCCAGTCAAAATGCAGATGGAAATAGATGAATACATG
GCTGAATTTGACGCCAAAGTCAAAAAAGAGCAGGAGGTGGAGCTCGCTAATGAGGGTATT
CCCGATGAAGAGGGGTGGGTGAAAGTCACCACTCGGGGGCGTAACCCAGGGGTGAGCAGA
ACCGAAGCGAACCAAACCAGGATTCGAAGGAAGGAGAAACAGAAACGAAAAGAAAAGGAA
ATGCTCAGCATATATAAATACCAGGTCCGAGAATCTAAGCGGGAACAAATCGCAAATCTT
CGTAAGAAATTTGAAGAGGACAAATTAAAGATTAAAAATCTGAAAGAATCTCGTAAATTT
CGGCCTTTCTAACACCTTGCGTGTGAATGGTCAAATTTTGGAAACGTTTTTTAGATTATT
TCGCCTTCTTAACAATACTTTCTGGGAAAACTTCTCGCTGTTAAAAAAAAATACCAAAAC
A

InterProScan

PANTHER	RRP7 (IPR024326) - T[14-260] 7.7E-56
Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[25-123] 1.2E-9
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[30-112] 6.04E-10
Pfam	RRM_dom (IPR000504) - T[39-71] 1.3E-4
Pfam	RRP7 (IPR024326) - T[131-260] 9.7E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RRP7A_HUMAN	42.616 %	179	2.84E-55
RRP7B_HUMAN	52.885 %	103	4.54E-28