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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1279.v1...' > 
  2. Transcript 'KH2012:KH.C10.59.v2....' > 
  3. Molecular Tool 'En>Dmbx (Stolfi 2011)' > 
  4. Transcript 'Moocci.CG.ELv1_2.S46...' > 
  5. Transcript 'Cisavi.CG.ENS81.R14....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R14.1646759-1650540.19338.t

Possible name(s)

KHDRBS1; KHDRBS2; KHDRBS3

Gene model

Cisavi.CG.ENS81.R14.1646759-1650540

Location

R14 [1,646,758 / 1,650,540]

Sequences

Amino acid sequence

Length: 358

>Cisavi.CG.ENS81.R14.1646759-1650540.19338.p
MESTADSKYLPELMAEKDSIDPSFVHAVRLITSEIDKVKNPTPSPKPGSHDFKLFNIYDD
KYPRVDCNIRIPVKEFPRINFVGRLIGPGGSTLKGIQEATNTKIAILGKGSLRDKSKEDE
LLKSAEPKYGHLKHPLHVRISAIGTVDQAYTSIGRACSEVSKLLVVEDEDEYIAAGEAAM
LHARYGVQGGMRGSSRGAPRGARGGGRGVPRGSSSVAGVRGSARGARGGVPRGSMRGSQR
GASRGGPSSARGGLPRMPKAQLNSEAYGQLQGYDFGETTYDAFNEYDTAYDAYAASAEDV
YADPFADGSYGVTESYDAYSFADKFDRFGNGTDSFASKPAYRGKIRGGSRGRSAGKPY

Nucleotide sequence

Length: 1,770

>Cisavi.CG.ENS81.R14.1646759-1650540.19338.t
CGCCAGCATCGTGGCCAGAAGAACCATTTGAGAAGCGAAGCTGACGGTGTTTTACGTTTT
ATTGAACAAGTGTACAAGAACATCAATTTGTCATGGAGTCTACTGCTGATTCAAAATACT
TGCCAGAGTTGATGGCTGAAAAGGATAGCATCGATCCATCTTTTGTGCATGCTGTTAGAT
TAATAACCTCTGAAATTGACAAAGTGAAAAATCCGACACCTTCACCGAAACCAGGTTCAC
ATGATTTTAAGTTGTTTAACATTTACGACGACAAATACCCACGTGTCGATTGCAATATTA
GAATACCCGTCAAAGAGTTTCCACGCATAAACTTTGTCGGGAGATTAATTGGTCCGGGTG
GATCAACATTAAAAGGAATCCAAGAGGCCACAAACACGAAAATTGCTATTCTTGGCAAAG
GTTCTTTAAGGGATAAGAGCAAGGAAGACGAATTACTTAAAAGTGCGGAACCAAAATATG
GTCACTTGAAGCATCCACTACATGTTCGAATCAGTGCAATTGGAACTGTTGATCAGGCAT
ACACGAGCATAGGAAGGGCATGTTCAGAAGTGAGTAAACTGTTGGTGGTGGAAGATGAAG
ACGAATATATTGCTGCTGGAGAAGCAGCGATGTTGCATGCGCGGTATGGTGTTCAAGGTG
GAATGAGGGGGTCATCAAGAGGAGCACCTCGTGGAGCAAGGGGTGGAGGAAGGGGAGTTC
CCCGAGGATCATCATCTGTTGCTGGGGTCCGTGGGTCTGCGAGGGGCGCAAGAGGCGGAG
TACCTAGAGGTTCTATGCGTGGCAGTCAAAGGGGAGCCTCCCGAGGTGGACCTAGCAGCG
CAAGGGGTGGACTTCCCAGAATGCCAAAAGCACAATTGAATTCAGAGGCTTATGGTCAAC
TTCAGGGTTACGACTTTGGGGAAACTACGTATGATGCTTTTAATGAGTACGACACTGCAT
ATGATGCCTATGCTGCTTCAGCTGAAGACGTTTATGCAGATCCATTTGCTGATGGCTCAT
ACGGAGTTACAGAGTCTTACGATGCTTATTCTTTTGCTGATAAGTTTGATCGTTTTGGAA
ATGGCACTGATTCGTTTGCCTCCAAACCTGCATATCGTGGTAAAATCCGTGGTGGCTCAA
GGGGTCGCTCAGCTGGCAAACCCTATTGAAACCACATTGAAGGGTTGAAGTACTGTCTCA
TGCCTAAAATCGAACCAGGCAAGATTCTAGATATTGTTCATGGTTCAAATTAATCATGCT
GAGGGATCTTAACAAATTCAATCATACAATGAAACCGAACATTTCTTTTGTTCAATAAAT
GAACCGATGTAAAAAAAATTTAGATGGCCTGTTAAAGATTTTTTATTGTTTTAACACAAT
TTTGTTGTTTAAAATATAGTTTTATGTTGTTGTAAAACTTCTATTTACTTTTTCAGTATA
AATTTGAATGTTAATGAACCTTAAAAAAACTGTTTAACGGTATTCAAAACAATTGCATGT
TTAGCAATCTAAACAAACCAACGATTTTATTTTAATGTTCTTTACAAAAACAAATATTAC
AGCATTTAAAAAAAAATTGCCAATCAACCCAAAAGTTTAATGCTTGATTAAATTATCGCC
CTGTCCTTATGTGAATTATCTTACATATTTATAAACCATTAATATGAATAATGGAAAGCT
TCACAAACTGAAACTGCAAAAAACATTGGAATTAACAAGCGTTCTGCATTTTAACCATGA
AGATGTAAATAAAATTGCTTTTTCTATTCA

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[1-175] 7.5E-42
Pfam
Qua1_dom (IPR032571) - T[8-41] 8.4E-15
SMART
KH_dom (IPR004087) - T[65-161] 4.7E-6
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[69-168] 3.48E-21
Pfam
KH_dom_type_1 (IPR004088) - T[80-120] 3.3E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDR3_HUMAN 38.166 % 178 4.75E-53
KHDR1_HUMAN 34.127 % 160 2.75E-45
KHDR2_HUMAN 36.97 % 160 2.5E-46