- Transcript 'Moocul.CG.ELv1_2.S85...' >
- EST 'AHC0AAA232YP09_RM1' >
- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R14....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R14.1396421-1414605.18977.t
Possible name(s)
POC1A; POC1B; RACK1
Gene model
Location
R14 [1,396,420 / 1,414,574]
Amino acid sequence
Length: 322
>Cisavi.CG.ENS81.R14.1396421-1414605.18977.p
TMATEQMTLRGTLKGHKGWVTKIAPPAIPEMILSASRDKSLIVWKLTRDENTYGVMNRRL
CGHSHFVSDVVISSDGQFALSGSWDSDLRLWNLQQGITTRRFCGHTKDVMSVAFSGDNRQ
IISASRDGTIKLWNTLGQCKYTIMEDSHTDWVSCVQFSPNPNTPIIVSSGWDKVVKVWNL
TNCKLKTNHYGHTAFINSVTVSPDGSLCASGGKDGQAMLWDLSEGKHLYTLSNGDNEIHA
LAFSPNRYWLCAACGPTIKIWDLEGKALLDELRPELINLNSKAGQPECLSLAWSPDGQTL
FAGYTDNLIRVWQVSILASQSA
Nucleotide sequence
Length: 1,063
>Cisavi.CG.ENS81.R14.1396421-1414605.18977.t
TTACAAATAAAAAAAGTTATGGTGGCTATCGTAGGTTAGTTGGTACCTTTATCTGTTGGA
ATCTGACGAAACACAGATTCAATTTTGAACTATGGCAACGGAACAAATGACCCTTAGGGG
TACACTTAAAGGCCACAAAGGATGGGTAACAAAAATTGCCCCCCCCGCTATTCCTGAAAT
GATTTTGTCTGCTTCTAGAGACAAGTCATTAATTGTGTGGAAACTAACTCGCGATGAGAA
CACGTATGGTGTGATGAACAGACGATTGTGCGGACATTCTCACTTTGTATCGGATGTTGT
CATCTCTTCCGATGGTCAGTTTGCTCTCTCTGGATCATGGGATTCAGATTTGAGACTGTG
GAACCTGCAGCAGGGAATAACCACTCGTCGGTTCTGTGGACATACCAAAGATGTCATGTC
CGTTGCATTTTCTGGTGACAACAGACAGATTATTTCTGCTTCCCGAGACGGAACAATCAA
GTTGTGGAACACACTCGGACAGTGCAAATATACCATCATGGAGGATAGCCATACTGATTG
GGTGTCATGTGTTCAATTTTCACCAAACCCCAATACTCCAATCATTGTATCAAGTGGCTG
GGATAAAGTTGTAAAGGTGTGGAACCTCACCAACTGCAAGCTGAAGACCAACCATTACGG
CCACACTGCCTTCATTAACTCAGTGACTGTCTCTCCTGACGGTTCCCTTTGTGCATCTGG
TGGTAAAGATGGTCAAGCCATGCTATGGGATCTTAGTGAAGGTAAACATCTTTACACACT
GAGCAATGGGGACAATGAGATCCACGCACTCGCTTTCTCGCCCAACCGATACTGGCTATG
TGCTGCTTGTGGACCAACTATCAAGATTTGGGATTTGGAAGGCAAAGCTCTACTTGATGA
ATTGCGACCCGAGCTGATCAACCTGAACAGCAAAGCTGGCCAACCTGAATGCCTGTCTTT
AGCATGGTCACCAGATGGACAGACTCTTTTCGCTGGTTATACTGACAACCTTATCCGAGT
ATGGCAAGTATCAATCTTGGCCAGTCAGTCCGCACAATAATGT
| SMART |
WD40_repeat (IPR001680) - T[6-45] 0.0036 - T[53-92] 7.9E-4 - T[95-134] 2.5E-9 - T[136-179] 1.4E-7 - T[182-221] 2.5E-8 - T[224-262] 0.011 - T[273-313] 0.041 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[6-313] 4.07E-75 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[10-318] 4.3E-126 |
| Pfam |
WD40_repeat (IPR001680) - T[10-45] 0.022 - T[59-92] 2.0E-5 - T[99-134] 9.7E-8 - T[139-179] 1.7E-5 - T[189-221] 1.5E-6 - T[226-262] 5.3E-5 - T[290-312] 9.7E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[13-322] 56.236 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[13-54] 10.174 - T[60-101] 13.416 - T[102-134] 15.087 - T[145-188] 11.979 - T[189-230] 14.92 - T[290-315] 10.375 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[79-93] . - T[121-135] . - T[166-180] . - T[208-222] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[121-135] 1.8E-7 - T[166-180] 1.8E-7 - T[208-222] 1.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 29.355 % | 129 | 1.78E-34 |
| POC1B_HUMAN | 29.43 % | 130 | 2.91E-34 |
| RACK1_HUMAN | 76.752 % | 504 | 0 |