Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,819

>Cisavi.CG.ENS81.R14.1178811-1210675.18491.p
MHFSKMLHLRTSLKPTSNDQQQDSSSPRSRKKRYLSYPRNVEVMVTADNAMLQAHDDVEH
YVLTLMAIVNHVYRDPSIENLVNIVLVKLIVIGDSQNGPRVARDAHTCLRNFCEWQFTQN
DPDDSHPDHHDTSVLITGQDICRSNSACDTLGLAELGTMCDLRKSCSINEDNGLSTAFTI
AHEIGHEFNAPHDNNDKCLDARGRSVGLNVMSPTLDNNAHPWSWSKCSARFITSFLDNGN
GQCLLDEPPQRILPLPTEEPGEVFDANAQCSFVYGPGVHHCDLMNTCARLWCINQNRSHG
CRTTHVPWADGTRCGDRMVRSMSWCQRGHCVPKDRRRIPVDGNWGEWSRFGDCSRRCGGG
IKSAHRECDSPKPQYGGRYCTGKRKKFRPCNYQECPEETDIRAEQCAAYNNWSRHHRHRI
RGIGPDAEWIPKYDGILLQDRCKLICQVKSEDQYAVPWYVLKPKVINGTPCGPDTTDICV
EGVCKMAGCDHVLNSRTTVDECGICNGDNSACRTIQGSYNTGYNIGYNRVVIIPAGANNI
VIIQRSYTDDAEDFNYLALRDARGNYILNGNRSVMKNKHHIHKRNNKKYKGPLYQCDYTG
TDTAIEKINCSKAIGIDLIVEVLSAGDLMPPNIHYRYNIPVRDRLTFRWDPHGPPSPCSR
MCDGKTKGKILCVRSDQQIVSDRKCSHLPKPSTIISPCNTRCQFTWQPKPTKCSVSCGRG
TTRLDFECRKVSIETQWLVFDTWCPLPKPGGVSSCEGDCLSASWDYSAWSECSRTCGGGS
QTRTGVCRDSRGREVNPDQCDDNGQSASRSCGNRPCPQWVVSAFSPVRRRCYFVMYHSNN
RLITSQCMVTCGSGVRHRRVWCGVRGAVRPDDQCSRKRKPPTTTLCTSHDCPKWTYDSWG
PCSATCGEGTSVRLYRCVDHSSSTVSDSLCNTALLRHDTRTCHGTNICETPRASRTYGGG
YPFLVSRGLAERETTTVVHTTSTEAPAVHSMFGGVHFESGGAVINSRHENARWRTGSWTP
CSSSCGAGVRERYVSCRYIRSDVVALEEECGSAESRPAARESCEDTPCYGVWRTGVWTQC
SVTCGEGTRTRYIRCAYDGRYQQDETHCMTEDRPTESESCSSAPCITTTTTTTHAPTTTP
LTTTTTTTSTTTTISTTTTETTTAATTTTVSRKSRAHDTNRTRLGNWRTGRWSPCSSTCG
GGTQKRAVVCYSPHTTTADCGSLDPPARIQVCNANPCPRWKRGRWGKCSKSCKGGRRIRN
VYCVMSDGRATYNHRCNVILKPVEIERCGTGICTGGHRWRKGVAVYTCISNSKTTTLAIH
RTFFFDIIVVKYQRVCSASCGRGSKTRSVECFNSNRAVVADAKCLATKPKPRVVRNCVKQ
RRCPRWRTGKWNQCSATCGTGIQLRRVNCRYKRKVIVDELCDVSNRPDDVISCNVTRCPS
YKWQVERWRPCSVSCGDGTMTRLVTCTSLSTNSAVDSQLCVSEIGDTAKPADSQRCDNGP
CSAFWRAGAWSECTKTCGPGIQRRPVKCSFVDPITYKEKSVTSCRLSTRPYAVRDCDRGR
CNSQVYWRVGSWSECSRTCGEGRSMRRVVCADRATQSSLADRVCEAIPSFRPDRTRICQL
RPCIPTTCRELQSHRDLRRDGEYYLQVGGAMAKIYCRGMATSNPTEYITLPKGEEENYSE
IYGYRLVNADTCPYNGSRDSSCACHRDYPEAGRTVYRKVRFDVASMRVIANQFTFATTKY
GKEVPFAMAGDCYSRSNCPQGEFKMNFFGTGFVVSSNTRWLSYGEHPARKIQRSHNGEQI
TGKCGGYCSRCQPDPIVGL

Nucleotide sequence

Length: 5,457

>Cisavi.CG.ENS81.R14.1178811-1210675.18491.t
ATGCATTTCTCTAAAATGCTTCACCTGAGGACTTCTTTAAAACCTACCAGCAATGACCAG
CAACAAGACAGCAGTTCCCCTCGTTCTAGAAAAAAGAGGTATCTATCCTACCCAAGAAAT
GTGGAGGTCATGGTGACAGCGGACAACGCAATGCTTCAAGCACATGATGACGTGGAACAT
TACGTTCTCACTCTGATGGCAATAGTGAATCACGTCTACCGAGATCCAAGCATTGAGAAC
TTGGTGAATATTGTCCTCGTGAAGCTCATCGTGATCGGCGACTCACAAAACGGACCCCGG
GTAGCTCGAGATGCTCACACCTGCCTTCGTAATTTCTGCGAGTGGCAATTCACACAGAAC
GACCCTGACGATTCTCACCCGGACCACCACGACACTTCAGTGCTGATCACCGGGCAAGAT
ATCTGCAGGTCGAACTCTGCTTGCGACACACTAGGACTGGCCGAGTTGGGAACAATGTGC
GATCTGCGAAAGAGTTGTTCTATTAACGAAGATAACGGTTTGAGCACCGCGTTCACCATC
GCTCACGAGATAGGGCACGAGTTCAACGCTCCACACGATAACAATGATAAATGTTTGGAC
GCTAGAGGTCGCTCTGTCGGGTTAAACGTGATGTCGCCAACTCTGGACAACAACGCCCAC
CCGTGGTCGTGGTCAAAATGTAGCGCGAGGTTCATTACAAGCTTTCTAGATAATGGCAAC
GGGCAGTGTCTGTTGGATGAACCTCCACAGAGGATCTTGCCGCTTCCGACAGAAGAACCG
GGCGAGGTGTTCGACGCCAACGCCCAGTGCAGTTTTGTATATGGACCCGGCGTCCACCAC
TGCGATTTAATGAACACCTGCGCCCGACTGTGGTGTATTAACCAAAACCGAAGCCACGGC
TGCAGGACGACACACGTTCCATGGGCGGATGGCACAAGATGCGGGGACCGCATGGTAAGG
TCAATGTCCTGGTGTCAGCGCGGTCACTGTGTACCGAAAGATCGACGCAGAATCCCCGTG
GATGGGAATTGGGGGGAATGGAGTCGGTTCGGCGATTGTTCCCGTAGATGTGGTGGAGGA
ATAAAAAGTGCCCATCGGGAGTGCGACAGTCCGAAACCGCAGTACGGCGGAAGGTACTGT
ACTGGAAAAAGAAAGAAGTTCCGTCCGTGCAATTACCAGGAATGTCCCGAAGAAACCGAC
ATTCGAGCAGAGCAATGCGCAGCTTACAACAACTGGTCACGTCACCACCGGCATCGTATC
CGAGGAATCGGCCCCGACGCCGAATGGATCCCGAAATACGACGGAATCCTTTTACAGGAT
CGGTGCAAGTTGATTTGTCAGGTCAAGTCGGAAGACCAGTACGCTGTCCCATGGTACGTA
CTGAAGCCTAAAGTGATCAACGGAACGCCCTGCGGTCCCGACACAACCGATATATGCGTT
GAAGGCGTCTGCAAGATGGCTGGCTGCGATCACGTGTTGAACTCGCGGACGACAGTGGAT
GAATGTGGGATTTGCAACGGGGACAACAGCGCGTGCAGGACAATACAGGGAAGCTACAAC
ACTGGTTACAACATCGGTTACAACCGGGTGGTGATCATACCGGCAGGAGCGAATAACATT
GTTATAATTCAACGCTCTTACACTGACGATGCTGAAGATTTCAACTATCTTGCTTTGAGA
GACGCCCGTGGAAACTACATCCTGAACGGGAACCGAAGTGTAATGAAGAATAAACATCAC
ATCCACAAAAGAAATAACAAGAAGTACAAGGGCCCGTTATACCAATGCGATTACACCGGC
ACCGATACCGCTATCGAGAAAATAAACTGCAGCAAAGCCATCGGAATTGATTTAATAGTT
GAGGTTTTATCTGCCGGTGACCTGATGCCTCCGAACATACACTACCGGTACAATATTCCA
GTGAGAGATAGATTGACCTTCAGATGGGATCCACATGGTCCACCGAGCCCATGCAGTCGA
ATGTGCGACGGGAAAACGAAGGGAAAGATACTATGCGTCAGATCCGACCAACAAATTGTA
TCTGATCGCAAATGCAGCCATCTCCCTAAACCCAGCACCATCATCAGCCCCTGCAATACA
CGATGTCAATTTACGTGGCAACCGAAACCTACGAAATGCTCAGTCAGCTGTGGACGTGGG
ACGACTCGCTTAGATTTTGAATGCAGAAAGGTAAGCATAGAAACACAATGGCTTGTCTTC
GACACCTGGTGTCCACTACCGAAACCTGGTGGTGTCAGTTCCTGTGAAGGGGATTGTCTT
TCTGCAAGTTGGGATTACAGTGCTTGGAGCGAGTGTTCAAGAACGTGCGGCGGAGGAAGC
CAAACACGCACTGGTGTTTGCCGCGACAGCCGGGGACGTGAAGTCAATCCAGATCAGTGT
GACGATAACGGCCAATCTGCTTCAAGAAGCTGCGGAAATCGCCCTTGTCCTCAGTGGGTG
GTATCCGCCTTTTCACCGGTAAGACGTCGCTGTTATTTCGTGATGTATCATTCCAACAAT
CGTTTGATTACGTCACAGTGCATGGTGACATGCGGGTCGGGTGTACGTCATCGACGTGTG
TGGTGCGGCGTGCGAGGCGCCGTGAGACCGGACGATCAATGCAGCAGGAAACGAAAACCA
CCAACCACGACTCTATGTACAAGCCACGATTGCCCGAAATGGACGTACGACTCCTGGGGC
CCGTGCTCTGCAACATGTGGGGAAGGAACTTCAGTTCGGTTGTATCGTTGCGTGGACCAT
TCGTCTTCCACTGTAAGCGATTCACTCTGCAACACAGCGCTCTTACGCCATGACACACGG
ACTTGTCATGGAACAAATATTTGTGAAACGCCACGAGCATCACGAACTTACGGCGGCGGA
TACCCATTTTTAGTTTCCCGGGGACTAGCTGAACGGGAGACAACCACAGTTGTCCACACA
ACATCCACCGAGGCACCAGCTGTGCATTCGATGTTCGGGGGAGTTCACTTCGAATCTGGA
GGTGCGGTGATCAACAGCCGCCACGAAAATGCAAGATGGCGTACCGGATCCTGGACTCCA
TGCTCCTCGTCGTGCGGAGCAGGAGTCCGGGAGAGATACGTGAGCTGTCGGTACATCAGA
AGTGATGTAGTAGCACTGGAGGAGGAATGTGGTTCGGCTGAAAGTCGACCAGCTGCTCGG
GAGAGTTGCGAAGATACTCCATGCTATGGTGTGTGGAGGACGGGTGTTTGGACTCAATGT
TCGGTTACCTGTGGCGAAGGGACCCGAACGCGTTACATTCGTTGCGCGTACGATGGGCGA
TACCAACAAGACGAGACTCACTGCATGACTGAAGACAGACCGACGGAATCTGAATCTTGT
AGTTCTGCCCCGTGTATCACCACAACGACCACAACAACCCATGCACCGACAACTACACCA
TTGACTACTACAACGACCACTACTTCCACTACAACTACCATCAGCACCACAACGACAGAA
ACAACAACAGCGGCTACAACAACCACAGTATCGAGAAAGAGTCGAGCACACGACACAAAC
AGGACAAGACTTGGAAACTGGAGGACAGGACGGTGGTCACCGTGCTCTAGTACATGCGGT
GGTGGAACACAAAAACGAGCAGTGGTCTGTTACTCTCCACACACCACGACAGCAGATTGC
GGATCACTTGACCCACCAGCCAGAATACAAGTCTGTAATGCTAACCCTTGTCCAAGGTGG
AAGCGCGGTCGATGGGGCAAGTGTTCGAAATCGTGCAAAGGGGGGCGACGAATCCGAAAC
GTTTACTGCGTGATGTCGGACGGGCGTGCTACGTACAACCATCGGTGCAATGTCATCCTC
AAACCAGTTGAGATCGAACGTTGCGGGACGGGAATCTGCACTGGTGGCCATCGGTGGCGC
AAAGGAGTAGCTGTTTATACCTGTATCAGCAACAGCAAAACCACTACGTTGGCAATTCAT
CGAACATTTTTTTTTGACATAATTGTTGTCAAATATCAAAGAGTATGCTCTGCAAGCTGT
GGTCGTGGATCGAAAACTCGAAGTGTTGAATGTTTCAACTCCAACCGGGCGGTGGTGGCA
GATGCGAAGTGCTTGGCGACCAAGCCCAAACCACGTGTCGTGCGGAACTGCGTCAAACAG
CGAAGATGTCCGCGCTGGAGAACCGGCAAATGGAACCAGTGTTCCGCCACTTGTGGTACC
GGCATCCAACTGCGTAGAGTCAACTGCCGCTACAAAAGAAAGGTTATCGTGGACGAGCTA
TGTGACGTAAGCAACCGACCCGATGACGTCATCAGTTGCAACGTCACGAGATGCCCCAGC
TACAAATGGCAGGTTGAGCGATGGCGCCCTTGCAGCGTATCGTGCGGGGACGGAACGATG
ACGCGGCTGGTCACGTGCACCAGCTTATCCACGAACAGCGCGGTTGATTCGCAACTTTGC
GTCTCGGAAATCGGCGACACCGCTAAACCGGCGGATTCACAACGCTGCGATAATGGACCG
TGCAGCGCTTTCTGGAGAGCGGGCGCCTGGTCAGAGTGCACCAAGACATGCGGTCCCGGG
ATACAACGACGGCCTGTGAAGTGTTCCTTCGTTGATCCGATCACGTACAAGGAGAAGAGT
GTGACGTCATGTCGACTATCGACTCGTCCATACGCCGTGCGCGATTGCGACAGAGGGCGG
TGCAATTCACAAGTTTACTGGCGGGTTGGCTCATGGAGTGAGTGTTCGAGAACATGCGGG
GAAGGTCGTTCCATGCGCAGAGTGGTGTGCGCAGATCGTGCAACTCAGTCTTCCCTAGCA
GACAGAGTGTGTGAGGCTATTCCGTCGTTCCGACCCGATCGAACCAGAATATGCCAGCTC
AGACCCTGCATCCCCACCACATGTCGGGAACTGCAGTCGCATAGAGATCTTAGAAGGGAC
GGGGAGTATTATTTGCAAGTTGGCGGCGCCATGGCTAAGATCTACTGCAGAGGAATGGCC
ACATCCAATCCCACCGAATACATCACCTTGCCGAAAGGAGAAGAGGAAAACTACTCCGAA
ATCTACGGATACAGACTGGTAAACGCCGACACTTGTCCTTACAACGGGAGCCGGGATTCG
TCGTGTGCTTGCCATCGAGACTATCCGGAAGCCGGGCGCACTGTGTACCGAAAAGTCCGA
TTCGACGTTGCGTCTATGCGGGTCATAGCCAACCAATTCACATTTGCGACCACTAAGTAT
GGTAAAGAAGTTCCATTTGCAATGGCTGGCGACTGCTACAGCCGAAGCAATTGTCCACAG
GGTGAATTTAAAATGAATTTCTTCGGGACTGGTTTCGTCGTGAGTTCTAACACTAGGTGG
TTGTCGTACGGTGAGCACCCAGCCCGGAAAATCCAGCGAAGTCACAACGGGGAGCAAATA
ACAGGGAAGTGTGGCGGCTACTGCAGCAGGTGTCAACCTGATCCCATTGTAGGACTA

InterProScan

Gene3D	MetalloPept_cat_dom_sf (IPR024079) - T[34-253] 5.6E-85
ProSiteProfiles	Peptidase_M12B (IPR001590) - T[39-248] 21.502
Pfam	Peptidase_M12B (IPR001590) - T[41-248] 5.6E-20
SUPERFAMILY	TSP1_rpt_sf (IPR036383) - T[338-395] 2.49E-13 - T[755-816] 5.49E-8 - T[886-943] 1.57E-8 - T[1011-1068] 5.23E-7 - T[1071-1125] 1.03E-7 - T[1186-1237] 1.83E-10 - T[1236-1293] 4.58E-8 - T[1381-1438] 4.32E-9 - T[1438-1501] 7.32E-8 - T[1504-1561] 3.92E-7 - T[1565-1623] 5.23E-9
Gene3D	TSP1_rpt_sf (IPR036383) - T[339-395] 1.5E-16 - T[759-817] 6.2E-8 - T[893-948] 1.0E-5 - T[1010-1068] 4.9E-6 - T[1070-1125] 1.2E-8 - T[1184-1238] 1.9E-10 - T[1239-1293] 8.9E-6 - T[1381-1439] 5.1E-9 - T[1441-1501] 4.6E-7 - T[1502-1561] 2.5E-7 - T[1564-1623] 6.9E-8
ProSiteProfiles	TSP1_rpt (IPR000884) - T[341-396] 12.968 - T[759-817] 10.751 - T[890-949] 10.575 - T[1009-1067] 9.374 - T[1068-1126] 10.606 - T[1184-1238] 11.372 - T[1240-1294] 8.717 - T[1382-1439] 10.473 - T[1440-1500] 8.577 - T[1501-1562] 10.129 - T[1563-1624] 10.655
SMART	TSP1_rpt (IPR000884) - T[344-396] 6.8E-10 - T[763-817] 3.0E-6 - T[840-892] 0.28 - T[893-949] 1.6E-4 - T[1012-1064] 0.0039 - T[1071-1126] 1.9E-7 - T[1186-1238] 1.0E-6 - T[1239-1294] 0.07 - T[1336-1384] 7.6 - T[1385-1439] 5.9E-5 - T[1442-1502] 0.074 - T[1504-1562] 0.21 - T[1566-1624] 3.9E-5
Pfam	TSP1_rpt (IPR000884) - T[345-395] 5.3E-8 - T[766-816] 4.0E-4 - T[898-920] 0.0025 - T[1015-1068] 0.0011 - T[1075-1125] 5.0E-7 - T[1189-1237] 5.1E-7 - T[1243-1266] 0.063 - T[1388-1412] 6.9E-5 - T[1446-1471] 0.0014 - T[1508-1529] 0.0021 - T[1570-1623] 4.6E-5
Pfam	ADAM_spacer1 (IPR010294) - T[514-640] 1.0E-18
ProSiteProfiles	Pept_M12B_GON-ADAMTSs (IPR012314) - T[1624-1819] 75.428
Pfam	Pept_M12B_GON-ADAMTSs (IPR012314) - T[1626-1818] 1.5E-74