- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R14....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R14.109639-120345.15854.t
Possible name(s)
DHX16; DHX37; DHX38
Gene model
Location
R14 [110,568 / 119,913]
Amino acid sequence
Length: 1,112
>Cisavi.CG.ENS81.R14.109639-120345.15854.p
GIDESNALILPDKSDTKVKKEQIKPLPRKLSKKQRKNYEKILDQKRKKEKRSALLESLSS
VQVSTSELAMLDSTAHLGTRNSKLRLLSKRPLPSDLREAITNNEGNNGFQINSLSGKRKR
RKLLRKDKPIIKEVAIEEDPLDETSSSDDEPQSSDSHEDSKDLELKPETFNAKSDGNGEI
IVSDTTEDIMLKPVTYVHLDRTAAIQESRLALPILGEEQVIMEAINGNQVVIICGETGSG
KTTQVPQFLYEAGYARAGMIGVTEPRRVAAVNMSKRVAIEMNLPTTKVSYQIRYDNNVTK
ETCLKFMTDGVLAQEMKQDFLLTKYSVLILDEAHERTANTDLLIGLLSRVVPLRNKKGNP
LKLIIMSATLRVEDFTKNERLFKVPPPVLKISTRQFPVTVHFSKKTPQNECEDGLGYAYL
DEAFKKICKIHRTLPPGGILVFVTGKQEVHALKRKLTQTFPSNMPATTEPNNNEEVLVLC
HNIISLVIPDVKSIKTLVLFQVKDDKKENLPQMINLDDYKTNPDNEENVEEKYHHPDLLL
SEEENESDSELLMDDSAYSAENDRVLPMQVLPLYAMLPPHKQKLVFEPVPLGSRLCVVAT
NVAETSLTIPGIKYIVDTGKVKRRVYDKTTGVSTFRIGWVSKASANQRAGRAGRTESGHT
YRLFSSAVFQDFDEFDLPEISSKPVAGLVLQMKSMNIDRVVNFPFPTPPPLDALESAEEL
LMSLGAINRPPRNLTLKELKKGSGSITELGRLIASFPVHPRYGKMIAMAIDQKSNVVEYV
ITIVAALTVKELFASFQYDADQDQDKLAARLQHMKVLWCTGGGPQRRLLGDPMVYLGAIG
AAEFAGATPSYCANNCLRPKAVIEIRKLRSQLTNLVNSVQPDYTIEVNPKMNPPIDIQVK
HLRQILLSAMPDQVARCIPTGEMVAGEAKKLKGAYRCALMDEPVFIHPESILSRDPLPVF
LVFQEITEMKEGKKIYMRDVTEIDPSWLATFCPQHCVFSKPLEEPSPTYDPVSDDVKCVV
TATYGRLSWPLGQVVITYPPGLDRYRWFAKFLLDGSVVSSLKKFSTVFLSRPVTMVKSWS
SLQPRTESMLKSLAGAGVDSKQKLVKMWKENP
Nucleotide sequence
Length: 3,336
>Cisavi.CG.ENS81.R14.109639-120345.15854.t
GGAATTGATGAAAGCAATGCATTAATATTACCTGACAAGAGTGATACAAAAGTAAAGAAA
GAACAAATTAAACCACTTCCAAGAAAACTAAGCAAAAAGCAAAGAAAAAATTATGAAAAG
ATTTTGGATCAAAAAAGAAAAAAGGAAAAAAGATCTGCTCTTCTTGAAAGTTTGTCTTCT
GTGCAAGTGAGCACATCGGAGCTGGCTATGCTTGACAGTACTGCTCACCTTGGTACCAGG
AATTCGAAATTGAGGTTATTGTCCAAACGGCCTCTGCCCAGTGACCTGAGAGAGGCAATA
ACTAACAATGAAGGAAACAATGGTTTTCAAATTAACAGTCTCAGTGGAAAACGAAAAAGA
AGGAAACTCTTAAGAAAGGACAAACCAATAATTAAAGAGGTTGCAATTGAAGAAGATCCG
CTTGATGAAACTTCCTCCAGTGACGATGAACCACAATCATCCGACTCCCATGAAGATTCC
AAAGACTTAGAGCTTAAACCTGAAACCTTTAATGCGAAATCAGATGGAAATGGCGAAATC
ATTGTCTCTGATACAACTGAGGATATCATGCTAAAGCCAGTGACTTATGTTCATTTGGAT
AGAACTGCAGCTATTCAAGAATCTCGACTGGCGCTCCCTATATTAGGTGAGGAGCAGGTA
ATAATGGAGGCAATCAATGGAAACCAGGTGGTTATTATTTGTGGAGAGACTGGTTCCGGA
AAAACAACTCAAGTACCACAGTTCCTGTATGAAGCTGGCTATGCAAGAGCTGGGATGATT
GGGGTGACAGAACCAAGACGAGTCGCTGCAGTTAATATGTCAAAACGTGTTGCCATCGAA
ATGAATCTTCCAACCACCAAAGTGTCATACCAAATAAGGTATGACAACAATGTCACCAAA
GAAACTTGTCTTAAGTTCATGACAGATGGTGTGCTGGCACAAGAAATGAAACAAGACTTT
CTTCTGACCAAATATTCTGTGCTTATATTGGATGAGGCGCACGAAAGAACAGCTAACACT
GACCTACTTATTGGATTGCTGTCAAGAGTTGTACCACTAAGAAATAAGAAAGGAAATCCA
TTGAAGCTCATAATAATGTCAGCTACTCTTAGAGTTGAAGATTTTACAAAGAATGAAAGA
CTTTTTAAAGTTCCTCCACCTGTTTTAAAAATCAGCACACGACAGTTCCCTGTCACTGTT
CACTTCAGCAAGAAAACTCCACAGAATGAATGTGAGGATGGGCTTGGTTATGCTTATCTA
GATGAAGCTTTTAAAAAAATTTGCAAAATCCACCGTACGTTACCACCGGGTGGTATACTT
GTGTTCGTCACCGGCAAACAGGAGGTCCATGCACTCAAACGGAAATTAACACAAACTTTT
CCGAGCAATATGCCGGCTACAACAGAACCTAACAACAATGAAGAAGTGCTAGTACTATGT
CACAATATTATTTCCCTAGTTATTCCTGATGTAAAATCTATTAAAACACTCGTTTTATTT
CAAGTTAAAGATGACAAAAAAGAAAATCTTCCTCAAATGATTAATTTAGACGACTACAAA
ACCAATCCTGATAATGAAGAAAATGTGGAAGAGAAATATCATCATCCCGACCTCTTGTTA
TCTGAAGAAGAGAATGAATCAGATTCCGAACTGCTGATGGATGACAGCGCTTACTCTGCT
GAAAATGACCGCGTCTTGCCCATGCAGGTCCTGCCTTTGTACGCAATGCTGCCTCCACAC
AAGCAGAAACTGGTTTTCGAACCGGTTCCTCTCGGTTCTAGGCTGTGTGTGGTTGCTACG
AATGTCGCTGAGACTTCACTTACCATCCCCGGCATCAAGTACATAGTGGACACTGGGAAA
GTGAAGCGAAGAGTTTACGATAAAACCACCGGCGTTTCAACGTTTAGAATTGGATGGGTT
TCAAAGGCATCAGCCAATCAGAGAGCAGGAAGAGCAGGCCGTACAGAATCGGGTCACACC
TACCGATTGTTTTCATCTGCTGTATTCCAAGATTTCGATGAGTTTGACCTGCCTGAAATA
TCATCAAAACCAGTTGCTGGACTTGTGCTGCAGATGAAATCAATGAACATTGATCGTGTG
GTCAACTTTCCCTTTCCCACTCCTCCACCACTTGATGCGCTAGAGAGTGCAGAAGAACTG
CTGATGTCATTGGGAGCGATCAATCGACCGCCACGAAACCTCACTCTGAAGGAACTTAAA
AAAGGCAGTGGATCGATCACCGAGCTCGGTCGACTCATTGCATCATTTCCTGTTCACCCA
CGGTATGGAAAAATGATCGCCATGGCAATAGACCAGAAGAGTAACGTTGTAGAATACGTT
ATAACCATCGTTGCCGCTCTGACTGTGAAGGAGCTGTTTGCTTCCTTTCAATATGATGCT
GATCAAGACCAAGATAAGCTTGCAGCTCGTTTGCAACACATGAAGGTGTTATGGTGTACA
GGAGGTGGCCCCCAGCGGAGGTTGCTCGGCGACCCGATGGTGTATTTGGGGGCCATCGGC
GCCGCTGAATTTGCTGGTGCTACACCTTCATACTGCGCTAATAACTGCTTGAGACCAAAA
GCGGTGATAGAGATTCGGAAATTGAGATCTCAACTTACCAACCTCGTCAACTCTGTCCAA
CCAGATTATACCATTGAAGTGAACCCTAAAATGAACCCGCCAATTGATATACAGGTAAAG
CATTTGCGTCAGATCCTGCTTTCCGCTATGCCTGACCAGGTAGCAAGATGTATTCCTACT
GGTGAGATGGTGGCTGGGGAGGCTAAGAAACTGAAAGGAGCGTATCGCTGTGCACTTATG
GATGAACCAGTGTTTATTCACCCGGAATCGATTTTGTCACGTGACCCACTTCCAGTTTTC
CTTGTGTTCCAGGAAATCACGGAAATGAAAGAAGGAAAAAAGATATACATGAGAGATGTC
ACCGAAATAGATCCATCTTGGCTTGCAACGTTTTGCCCCCAACATTGCGTGTTCTCCAAA
CCGCTGGAGGAGCCCTCACCCACCTACGATCCTGTGTCAGATGATGTTAAATGCGTTGTG
ACTGCCACATACGGTCGACTCTCGTGGCCACTTGGTCAAGTTGTAATTACCTACCCACCG
GGCTTAGACAGATACCGCTGGTTTGCCAAATTTCTATTGGACGGTTCGGTTGTGAGCTCA
CTGAAGAAATTCTCCACTGTTTTCCTGTCTCGGCCAGTGACGATGGTCAAGTCGTGGAGC
AGTCTGCAGCCACGGACTGAATCAATGCTGAAATCGTTAGCTGGTGCTGGTGTGGACAGC
AAGCAAAAACTTGTGAAAATGTGGAAAGAAAACCCA
| SMART |
Helicase_ATP-bd (IPR014001) - T[210-401] 7.9E-25 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[214-459] 9.0E-86 - T[561-820] 9.0E-86 - T[854-887] 9.0E-86 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[221-375] 1.5E-8 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[222-388] 20.978 |
| SMART |
AAA+_ATPase (IPR003593) - T[227-379] 4.5E-4 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[326-335] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[515-696] 12.292 |
| SMART |
Helicase_C (IPR001650) - T[557-656] 3.7E-12 |
| Pfam |
Helicase_C (IPR001650) - T[567-655] 3.1E-8 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[716-836] 2.2E-23 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[717-807] 4.3E-19 |
| Pfam |
DUF1605 (IPR011709) - T[902-994] 7.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX36_HUMAN | 26.683 % | 223 | 5.68E-60 |
| DHX37_HUMAN | 50.749 % | 899 | 0 |
| DHX35_HUMAN | 30.803 % | 205 | 2.28E-55 |