- Transcript 'KH2012:KH.L153.29.v2...' >
- Transcript 'Cisavi.CG.ENS81.R14....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R14.109639-120345.15853.t
Possible name(s)
DHX16; DHX37; DHX38
Gene model
Location
R14 [110,568 / 120,281]
Amino acid sequence
Length: 1,115
>Cisavi.CG.ENS81.R14.109639-120345.15853.p
GIDESNALILPDKSDTKVKKEQIKPLPRKLSKKQRKNYEKILDQKRKKEKRSALLESLSS
VQVSTSELAMLDSTAHLGTRNSKLSDLREAITNNEGNNGFQINSLSGKRKRRKLLRKVAI
EEDPLDETSSSDDEPQSSDSHEDSKDLELKPETFNAKSDGNGEIIVSDTTEDISSTSTLK
ENLNDNAQEQQVTIPEVLKPVTYVHLDRTAAIQESRLALPILGEEQVIMEAINGNQVVII
CGETGSGKTTQVPQFLYEAGYARAGMIGVTEPRRVAAVNMSKRVAIEMNLPTTKVSYQIR
YDNNVTKETCLKFMTDGVLAQEMKQDFLLTKYSVLILDEAHERTANTDLLIGLLSRVVPL
RNKKGNPLKLIIMSATLRVEDFTKNERLFKVPPPVLKISTRQFPVTVHFSKKTPQNECED
GLGYAYLDEAFKKICKIHRTLPPGGILVFVTGKQEVHALKRKLTQTFPSNMPATTEPNNN
EEVLGWFSTYKGFIFIVVLCHNIISLVIPDVKSIKTLVLFQVKDDKKENLPQMINLDDYK
TNPDNEENVEEKYHHPDLLLSEEENESDSELLMDDSAYSAENDRVLPMQVLPLYAMLPPH
KQKLVFEPVPLGSRLCVVATNVAETSLTIPGIKYIVDTGKVKRRVYDKTTGVSTFRIGWV
SKASANQRAGRAGRTESGHTYRLFSSAVFQDFDEFDLPEISSKPVAGLVLQMKSMNIDRV
LGRLIASFPVHPRYGKMIAMAIDQKSNVVEYVITIVAALTVKELFASFQYDADQDQDKVG
LQMQLAARLQHMKVLWCTGGGPQRRLLGDPMVYLGAIGAAEFAGATPSYCANNCLRPKAV
IEIRKLRSQLTNLVNSVQPDYTIEVNPKMNPPIDIQVKHLRQILLSAMPDQVARCIPTGE
MVAGEAKKLKGAYRCALMDEPVFIHPESILSRDPLPVFLVFQEITEMKEGKKIYMRDVTE
IDPSWLATFCPQHCVFSKPLEEPSPTYDPVSDDVKCVVTATYGRLSWPLGQVVITYPPGL
DRIIYLRSSSSNWVGAFLPDKCYSFQKSAMSCLNFYIFSLQPRTESMLKSLAGAGVDSKQ
KLVKMWKENPTYLREEILEWLAPASHQHFLSAWPL
Nucleotide sequence
Length: 3,429
>Cisavi.CG.ENS81.R14.109639-120345.15853.t
GGAATTGATGAAAGCAATGCATTAATATTACCTGACAAGAGTGATACAAAAGTAAAGAAA
GAACAAATTAAACCACTTCCAAGAAAACTAAGCAAAAAGCAAAGAAAAAATTATGAAAAG
ATTTTGGATCAAAAAAGAAAAAAGGAAAAAAGATCTGCTCTTCTTGAAAGTTTGTCTTCT
GTGCAAGTGAGCACATCGGAGCTGGCTATGCTTGACAGTACTGCTCACCTTGGTACCAGG
AATTCGAAATTGAGTGACCTGAGAGAGGCAATAACTAACAATGAAGGAAACAATGGTTTT
CAAATTAACAGTCTCAGTGGAAAACGAAAAAGAAGGAAACTCTTAAGAAAGGTTGCAATT
GAAGAAGATCCGCTTGATGAAACTTCCTCCAGTGACGATGAACCACAATCATCCGACTCC
CATGAAGATTCCAAAGACTTAGAGCTTAAACCTGAAACCTTTAATGCGAAATCAGATGGA
AATGGCGAAATCATTGTCTCTGATACAACTGAGGATATCAGTTCTACCAGTACTTTAAAG
GAAAACCTAAATGATAATGCACAAGAACAGCAAGTAACGATACCTGAAGTGCTAAAGCCA
GTGACTTATGTTCATTTGGATAGAACTGCAGCTATTCAAGAATCTCGACTGGCGCTCCCT
ATATTAGGTGAGGAGCAGGTAATAATGGAGGCAATCAATGGAAACCAGGTGGTTATTATT
TGTGGAGAGACTGGTTCCGGAAAAACAACTCAAGTACCACAGTTCCTGTATGAAGCTGGC
TATGCAAGAGCTGGGATGATTGGGGTGACAGAACCAAGACGAGTCGCTGCAGTTAATATG
TCAAAACGTGTTGCCATCGAAATGAATCTTCCAACCACCAAAGTGTCATACCAAATAAGG
TATGACAACAATGTCACCAAAGAAACTTGTCTTAAGTTCATGACAGATGGTGTGCTGGCA
CAAGAAATGAAACAAGACTTTCTTCTGACCAAATATTCTGTGCTTATATTGGATGAGGCG
CACGAAAGAACAGCTAACACTGACCTACTTATTGGATTGCTGTCAAGAGTTGTACCACTA
AGAAATAAGAAAGGAAATCCATTGAAGCTCATAATAATGTCAGCTACTCTTAGAGTTGAA
GATTTTACAAAGAATGAAAGACTTTTTAAAGTTCCTCCACCTGTTTTAAAAATCAGCACA
CGACAGTTCCCTGTCACTGTTCACTTCAGCAAGAAAACTCCACAGAATGAATGTGAGGAT
GGGCTTGGTTATGCTTATCTAGATGAAGCTTTTAAAAAAATTTGCAAAATCCACCGTACG
TTACCACCGGGTGGTATACTTGTGTTCGTCACCGGCAAACAGGAGGTCCATGCACTCAAA
CGGAAATTAACACAAACTTTTCCGAGCAATATGCCGGCTACAACAGAACCTAACAACAAT
GAAGAAGTGCTAGGTTGGTTTAGTACCTACAAAGGTTTTATTTTTATTGTAGTACTATGT
CACAATATTATTTCCCTAGTTATTCCTGATGTAAAATCTATTAAAACACTCGTTTTATTT
CAAGTTAAAGATGACAAAAAAGAAAATCTTCCTCAAATGATTAATTTAGACGACTACAAA
ACCAATCCTGATAATGAAGAAAATGTGGAAGAGAAATATCATCATCCCGACCTCTTGTTA
TCTGAAGAAGAGAATGAATCAGATTCCGAACTGCTGATGGATGACAGCGCTTACTCTGCT
GAAAATGACCGCGTCTTGCCCATGCAGGTCCTGCCTTTGTACGCAATGCTGCCTCCACAC
AAGCAGAAACTGGTTTTCGAACCGGTTCCTCTCGGTTCTAGGCTGTGTGTGGTTGCTACG
AATGTCGCTGAGACTTCACTTACCATCCCCGGCATCAAGTACATAGTGGACACTGGGAAA
GTGAAGCGAAGAGTTTACGATAAAACCACCGGCGTTTCAACGTTTAGAATTGGATGGGTT
TCAAAGGCATCAGCCAATCAGAGAGCAGGAAGAGCAGGCCGTACAGAATCGGGTCACACC
TACCGATTGTTTTCATCTGCTGTATTCCAAGATTTCGATGAGTTTGACCTGCCTGAAATA
TCATCAAAACCAGTTGCTGGACTTGTGCTGCAGATGAAATCAATGAACATTGATCGTGTG
CTCGGTCGACTCATTGCATCATTTCCTGTTCACCCACGGTATGGAAAAATGATCGCCATG
GCAATAGACCAGAAGAGTAACGTTGTAGAATACGTTATAACCATCGTTGCCGCTCTGACT
GTGAAGGAGCTGTTTGCTTCCTTTCAATATGATGCTGATCAAGACCAAGATAAGGTGGGA
TTGCAAATGCAGCTTGCAGCTCGTTTGCAACACATGAAGGTGTTATGGTGTACAGGAGGT
GGCCCCCAGCGGAGGTTGCTCGGCGACCCGATGGTGTATTTGGGGGCCATCGGCGCCGCT
GAATTTGCTGGTGCTACACCTTCATACTGCGCTAATAACTGCTTGAGACCAAAAGCGGTG
ATAGAGATTCGGAAATTGAGATCTCAACTTACCAACCTCGTCAACTCTGTCCAACCAGAT
TATACCATTGAAGTGAACCCTAAAATGAACCCGCCAATTGATATACAGGTAAAGCATTTG
CGTCAGATCCTGCTTTCCGCTATGCCTGACCAGGTAGCAAGATGTATTCCTACTGGTGAG
ATGGTGGCTGGGGAGGCTAAGAAACTGAAAGGAGCGTATCGCTGTGCACTTATGGATGAA
CCAGTGTTTATTCACCCGGAATCGATTTTGTCACGTGACCCACTTCCAGTTTTCCTTGTG
TTCCAGGAAATCACGGAAATGAAAGAAGGAAAAAAGATATACATGAGAGATGTCACCGAA
ATAGATCCATCTTGGCTTGCAACGTTTTGCCCCCAACATTGCGTGTTCTCCAAACCGCTG
GAGGAGCCCTCACCCACCTACGATCCTGTGTCAGATGATGTTAAATGCGTTGTGACTGCC
ACATACGGTCGACTCTCGTGGCCACTTGGTCAAGTTGTAATTACCTACCCACCGGGCTTA
GACAGGATTATCTATTTACGATCCAGCAGCTCGAACTGGGTTGGAGCATTTCTTCCAGAC
AAATGTTATTCGTTTCAAAAATCTGCCATGTCGTGTTTAAACTTCTATATCTTTAGTCTG
CAGCCACGGACTGAATCAATGCTGAAATCGTTAGCTGGTGCTGGTGTGGACAGCAAGCAA
AAACTTGTGAAAATGTGGAAAGAAAACCCAACATACCTCCGCGAAGAAATATTGGAATGG
CTGGCACCAGCTTCCCATCAGCACTTTCTGTCTGCGTGGCCTCTTATCTGACTTTACAAT
CCCATTGAGACTTTCGGTTTGTCATCTGCGGTTTCAACCTTTACGAGCAAGGTGCCGGGA
CGAGATATA
| SMART |
Helicase_ATP-bd (IPR014001) - T[217-408] 7.9E-25 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[221-466] 1.98E-78 - T[581-803] 1.98E-78 - T[832-865] 1.98E-78 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[228-382] 1.5E-8 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[229-395] 20.978 |
| SMART |
AAA+_ATPase (IPR003593) - T[234-386] 4.5E-4 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[333-342] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[535-716] 12.292 |
| SMART |
Helicase_C (IPR001650) - T[577-676] 3.7E-12 |
| Pfam |
Helicase_C (IPR001650) - T[587-675] 3.0E-8 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[706-814] 1.8E-7 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[721-786] 8.6E-13 |
| Pfam |
DUF1605 (IPR011709) - T[880-972] 7.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX37_HUMAN | 46.067 % | 821 | 0 |
| DHX33_HUMAN | 41.481 % | 189 | 7.52E-50 |
| PRP16_HUMAN | 41.573 % | 193 | 5.85E-50 |