Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,110

>Cisavi.CG.ENS81.R14.109639-120345.15852.p
GIDESNALILPDKSDTKVKKEQIKPLPRKLSKKQRKNYEKILDQKRKKEKRSALLESLSS
VQVSTSELAMLDSTAHLGTRNSKLRLLSKRPLPSDLREAITNNEGNNDPLDETSSSDDEP
QSSDSHEDSKDLELKPETFNAKSDGNGEIIVSDTTEDISSTSTLKENLNDNAQEQQVTIP
EVLKPVTYVHLDRTAAIQESRLALPILGEEQVIMEAINGNQVVIICGETGSGKTTQVPQF
LYEAGYARAGMIGVTEPRRVAAVNMSKRVAIEMNLPTTKVSYQIRYDNNVTKETCLKFMT
DGVLAQEMKQDFLLTKYSVLILDEAHERTANTDLLIGLLSRVVPLRNKKGNPLKLIIMSA
TLRVEDFTKNERLFKVPPPVLKISTRQFPVTVHFSKKTPQNECEDGLGYAYLDEAFKKIC
KIHRTLPPGGILVFVTGKQEVHALKRKLTQTFPSNMPATTEPNNNEEVLDDKKENLPQMI
NLDDYKTNPDNEENVEEKYHHPDLLLSEEENESDSELLMDDSAYSAENDRVLPMQVLPLY
AMLPPHKQKLVFEPVPLGSRLCVVATNVAETSLTIPGIKYIVDTGKVKRRVYDKTTGVST
FRIGWVSKASANQRAGRAGRTESGHTYRLFSSAVFQDFDEFDLPEISSKPVAGLVLQMKS
MNIDRVVNFPFPTPPPLDALESAEELLMSLGAINRPPRNLTLKELKKGSGSITELGRLIA
SFPVHPRYGKMIAMAIDQKSNVVEYVITIVAALTVKELFASFQYDADQDQDKVGLQMLRQ
LAARLQHMKVLWCTGGGPQRRLLGDPMVYLGAIGAAEFAGATPSYCANNCLRPKAVIEIR
KLRSQLTNLVNSVQPDYTIEVNPKMNPPIDIQVKHLRQILLSAMPDQVARCIPTGEMVAG
EAKKLKGAYRCALMDEPVFIHPESILSRDPLPVFLVFQEITEMKEGKKIYMRDVTEIDPS
WLATFCPQHCVFSKPLEEPSPTYDPVSDDVKCVVTATYGRLSWPLGQVVITYPPGLDRYR
WFAKFLLDGSVVSSLKKFSTVFLSRPVTMVKSWSSLQPRTESMLKSLAGAGVDSKQKLVK
MWKENPTYLREEILEWLAPASHQHFLSAWP

Nucleotide sequence

Length: 3,481

>Cisavi.CG.ENS81.R14.109639-120345.15852.t
GGAATTGATGAAAGCAATGCATTAATATTACCTGACAAGAGTGATACAAAAGTAAAGAAA
GAACAAATTAAACCACTTCCAAGAAAACTAAGCAAAAAGCAAAGAAAAAATTATGAAAAG
ATTTTGGATCAAAAAAGAAAAAAGGAAAAAAGATCTGCTCTTCTTGAAAGTTTGTCTTCT
GTGCAAGTGAGCACATCGGAGCTGGCTATGCTTGACAGTACTGCTCACCTTGGTACCAGG
AATTCGAAATTGAGGTTATTGTCCAAACGGCCTCTGCCCAGTGACCTGAGAGAGGCAATA
ACTAACAATGAAGGAAACAATGATCCGCTTGATGAAACTTCCTCCAGTGACGATGAACCA
CAATCATCCGACTCCCATGAAGATTCCAAAGACTTAGAGCTTAAACCTGAAACCTTTAAT
GCGAAATCAGATGGAAATGGCGAAATCATTGTCTCTGATACAACTGAGGATATCAGTTCT
ACCAGTACTTTAAAGGAAAACCTAAATGATAATGCACAAGAACAGCAAGTAACGATACCT
GAAGTGCTAAAGCCAGTGACTTATGTTCATTTGGATAGAACTGCAGCTATTCAAGAATCT
CGACTGGCGCTCCCTATATTAGGTGAGGAGCAGGTAATAATGGAGGCAATCAATGGAAAC
CAGGTGGTTATTATTTGTGGAGAGACTGGTTCCGGAAAAACAACTCAAGTACCACAGTTC
CTGTATGAAGCTGGCTATGCAAGAGCTGGGATGATTGGGGTGACAGAACCAAGACGAGTC
GCTGCAGTTAATATGTCAAAACGTGTTGCCATCGAAATGAATCTTCCAACCACCAAAGTG
TCATACCAAATAAGGTATGACAACAATGTCACCAAAGAAACTTGTCTTAAGTTCATGACA
GATGGTGTGCTGGCACAAGAAATGAAACAAGACTTTCTTCTGACCAAATATTCTGTGCTT
ATATTGGATGAGGCGCACGAAAGAACAGCTAACACTGACCTACTTATTGGATTGCTGTCA
AGAGTTGTACCACTAAGAAATAAGAAAGGAAATCCATTGAAGCTCATAATAATGTCAGCT
ACTCTTAGAGTTGAAGATTTTACAAAGAATGAAAGACTTTTTAAAGTTCCTCCACCTGTT
TTAAAAATCAGCACACGACAGTTCCCTGTCACTGTTCACTTCAGCAAGAAAACTCCACAG
AATGAATGTGAGGATGGGCTTGGTTATGCTTATCTAGATGAAGCTTTTAAAAAAATTTGC
AAAATCCACCGTACGTTACCACCGGGTGGTATACTTGTGTTCGTCACCGGCAAACAGGAG
GTCCATGCACTCAAACGGAAATTAACACAAACTTTTCCGAGCAATATGCCGGCTACAACA
GAACCTAACAACAATGAAGAAGTGCTAGATGACAAAAAAGAAAATCTTCCTCAAATGATT
AATTTAGACGACTACAAAACCAATCCTGATAATGAAGAAAATGTGGAAGAGAAATATCAT
CATCCCGACCTCTTGTTATCTGAAGAAGAGAATGAATCAGATTCCGAACTGCTGATGGAT
GACAGCGCTTACTCTGCTGAAAATGACCGCGTCTTGCCCATGCAGGTCCTGCCTTTGTAC
GCAATGCTGCCTCCACACAAGCAGAAACTGGTTTTCGAACCGGTTCCTCTCGGTTCTAGG
CTGTGTGTGGTTGCTACGAATGTCGCTGAGACTTCACTTACCATCCCCGGCATCAAGTAC
ATAGTGGACACTGGGAAAGTGAAGCGAAGAGTTTACGATAAAACCACCGGCGTTTCAACG
TTTAGAATTGGATGGGTTTCAAAGGCATCAGCCAATCAGAGAGCAGGAAGAGCAGGCCGT
ACAGAATCGGGTCACACCTACCGATTGTTTTCATCTGCTGTATTCCAAGATTTCGATGAG
TTTGACCTGCCTGAAATATCATCAAAACCAGTTGCTGGACTTGTGCTGCAGATGAAATCA
ATGAACATTGATCGTGTGGTCAACTTTCCCTTTCCCACTCCTCCACCACTTGATGCGCTA
GAGAGTGCAGAAGAACTGCTGATGTCATTGGGAGCGATCAATCGACCGCCACGAAACCTC
ACTCTGAAGGAACTTAAAAAAGGCAGTGGATCGATCACCGAGCTCGGTCGACTCATTGCA
TCATTTCCTGTTCACCCACGGTATGGAAAAATGATCGCCATGGCAATAGACCAGAAGAGT
AACGTTGTAGAATACGTTATAACCATCGTTGCCGCTCTGACTGTGAAGGAGCTGTTTGCT
TCCTTTCAATATGATGCTGATCAAGACCAAGATAAGGTGGGATTGCAAATGTTGAGGCAG
CTTGCAGCTCGTTTGCAACACATGAAGGTGTTATGGTGTACAGGAGGTGGCCCCCAGCGG
AGGTTGCTCGGCGACCCGATGGTGTATTTGGGGGCCATCGGCGCCGCTGAATTTGCTGGT
GCTACACCTTCATACTGCGCTAATAACTGCTTGAGACCAAAAGCGGTGATAGAGATTCGG
AAATTGAGATCTCAACTTACCAACCTCGTCAACTCTGTCCAACCAGATTATACCATTGAA
GTGAACCCTAAAATGAACCCGCCAATTGATATACAGGTAAAGCATTTGCGTCAGATCCTG
CTTTCCGCTATGCCTGACCAGGTAGCAAGATGTATTCCTACTGGTGAGATGGTGGCTGGG
GAGGCTAAGAAACTGAAAGGAGCGTATCGCTGTGCACTTATGGATGAACCAGTGTTTATT
CACCCGGAATCGATTTTGTCACGTGACCCACTTCCAGTTTTCCTTGTGTTCCAGGAAATC
ACGGAAATGAAAGAAGGAAAAAAGATATACATGAGAGATGTCACCGAAATAGATCCATCT
TGGCTTGCAACGTTTTGCCCCCAACATTGCGTGTTCTCCAAACCGCTGGAGGAGCCCTCA
CCCACCTACGATCCTGTGTCAGATGATGTTAAATGCGTTGTGACTGCCACATACGGTCGA
CTCTCGTGGCCACTTGGTCAAGTTGTAATTACCTACCCACCGGGCTTAGACAGATACCGC
TGGTTTGCCAAATTTCTATTGGACGGTTCGGTTGTGAGCTCACTGAAGAAATTCTCCACT
GTTTTCCTGTCTCGGCCAGTGACGATGGTCAAGTCGTGGAGCAGTCTGCAGCCACGGACT
GAATCAATGCTGAAATCGTTAGCTGGTGCTGGTGTGGACAGCAAGCAAAAACTTGTGAAA
ATGTGGAAAGAAAACCCAACATACCTCCGCGAAGAAATATTGGAATGGCTGGCACCAGCT
TCCCATCAGCACTTTCTGTCTGCGTGGCCTCTTATCTGACTTTACAATCCCATTGAGACT
TTCGGTTTGTCATCTGCGGTTTCAACCTTTACGAGCAAGGTGCCGGGACGAGATATATAT
CGATTTCTTTGCTTGTGTTGTATTGTATGGATCACTGCAATAAAATAAATGACGAAAAAG
A

InterProScan

SMART	Helicase_ATP-bd (IPR014001) - T[202-393] 7.9E-25
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[206-451] 1.83E-85 - T[527-776] 1.83E-85 - T[828-859] 1.83E-85
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[213-367] 1.5E-8
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[214-380] 20.978
SMART	AAA+_ATPase (IPR003593) - T[219-371] 4.5E-4
ProSitePatterns	DNA/RNA_helicase_DEAH_CS (IPR002464) - T[318-327] .
ProSiteProfiles	Helicase_C (IPR001650) - T[481-662] 12.292
SMART	Helicase_C (IPR001650) - T[523-622] 3.7E-12
Pfam	Helicase_C (IPR001650) - T[533-621] 3.2E-8
SMART	Helicase-assoc_dom (IPR007502) - T[682-810] 1.3E-22
Pfam	Helicase-assoc_dom (IPR007502) - T[683-780] 4.3E-19
Pfam	DUF1605 (IPR011709) - T[876-968] 7.2E-16