- Region 'REG00001306' >
- Molecular Tool 'Cirobu.Bra>MRFbΔCH (Izzi 2013)' >
- Transcript 'KH2012:KH.C8.163.v3....' >
- Transcript 'Cisavi.CG.ENS81.R1.4...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.4103105-4108702.19186.t
Possible name(s)
DCAF6; DCAF8; WDTC1
Gene model
Location
R1 [4,103,104 / 4,105,531]
Amino acid sequence
Length: 571
>Cisavi.CG.ENS81.R1.4103105-4108702.19186.p
LQRLQLDKELKGHTGCVNCLEWNESGSILASGSDDTNVNLWDPASCKPIKTYQSSHHGNI
FSVKFLPNTKDHLVATGAADSHVFVHDIERGEKVHGYACEGRVKRLVVTPAHPHNIWSAS
EDGAIRQFDIRQPQNGITRVLIDIRSMCGPSAEGKCLAINPTQTDYLALGANDQYVRLYD
RRWIKPKRCKKPRRHDYDGCATYFTPAHLHHKRKEMRRGGKYLCTTFVAFNKKGNELLAN
LGGEQLYLFDIFSSEQSIYNPVNETIRVATSTQSLQHNKPTSSTVEEAIPLPPAVEKLKL
KANNLFAKQQFSASILVYSAALKLEPKRAVLYGNRAAAYIKRNWDGDVYAALRDCHTALF
CNPNHVKAKFRLARCLYELHWLTEAQECLRDLKEKFPDFRNNRALVALERDVKSAIKQDK
TKETKRRHIMLGDESDLRNSAFDYTKRYCGHCNTTTDIKEANFFGNDGQYIVAGSDDGSF
FVWEHDTTNLVRVMRADDSIVNCLQPHPRTCMLATSGIDPIVRLWSPKQIASDDRAVAET
ESAAEANQKRMNEDPLEAIEDGLRNGFCCGN
Nucleotide sequence
Length: 1,713
>Cisavi.CG.ENS81.R1.4103105-4108702.19186.t
TTGCAGCGGCTACAGCTTGACAAAGAGCTTAAAGGACACACGGGGTGTGTGAACTGTTTG
GAATGGAATGAGTCCGGTTCGATATTAGCAAGTGGCTCTGATGACACGAATGTCAATCTA
TGGGATCCTGCATCTTGCAAACCCATCAAGACCTATCAAAGTTCTCACCATGGAAATATA
TTTTCTGTAAAATTTCTGCCAAACACGAAAGACCACTTGGTGGCAACTGGAGCAGCAGAT
TCACATGTGTTTGTTCATGATATTGAAAGAGGAGAAAAGGTACACGGTTACGCATGTGAA
GGACGAGTAAAAAGACTTGTGGTAACCCCAGCCCATCCACATAACATATGGAGTGCATCA
GAGGATGGAGCTATTCGACAATTTGACATTCGCCAACCACAAAATGGAATCACACGTGTA
CTGATTGATATTAGGTCGATGTGTGGACCTAGTGCAGAGGGAAAGTGTCTTGCCATTAAC
CCAACACAGACAGACTATCTTGCCCTTGGTGCAAATGATCAGTATGTGCGATTATATGAT
CGGCGGTGGATAAAGCCAAAAAGATGTAAAAAGCCTCGTCGGCATGATTATGATGGCTGT
GCAACTTATTTTACTCCTGCTCATCTCCACCACAAGCGCAAGGAAATGCGACGTGGGGGG
AAATATCTTTGCACCACTTTTGTTGCTTTTAACAAAAAAGGGAATGAGCTGCTTGCTAAC
TTAGGTGGTGAACAATTGTATTTATTTGACATTTTTAGCAGTGAGCAATCAATTTATAAT
CCAGTGAATGAAACTATTAGAGTTGCCACATCCACTCAATCTTTACAGCACAACAAACCA
ACCAGTAGTACAGTGGAAGAAGCAATCCCACTGCCCCCTGCTGTGGAAAAATTGAAATTA
AAAGCAAATAATTTATTTGCTAAACAACAATTTTCAGCGTCAATCCTGGTGTACAGTGCA
GCATTAAAGCTTGAACCAAAACGTGCAGTGTTGTACGGGAACCGGGCAGCTGCCTATATA
AAACGAAATTGGGATGGGGATGTTTATGCAGCATTACGTGACTGTCACACAGCTTTATTT
TGTAATCCAAACCATGTAAAAGCTAAATTCCGATTAGCTAGGTGTTTGTATGAACTGCAT
TGGCTCACAGAAGCACAGGAATGCTTGAGAGACTTAAAAGAAAAATTTCCAGACTTTCGA
AATAACAGAGCGCTGGTCGCGTTGGAAAGAGATGTCAAGTCTGCAATCAAACAAGATAAA
ACGAAAGAAACAAAAAGGCGGCATATTATGCTTGGAGATGAGTCGGACTTACGAAACAGT
GCCTTTGATTACACTAAGCGATATTGTGGTCATTGCAACACTACTACTGATATAAAAGAG
GCAAACTTTTTTGGTAATGATGGTCAATATATAGTTGCAGGCTCTGATGACGGCTCGTTT
TTTGTGTGGGAGCACGATACAACAAACCTTGTTCGGGTAATGAGGGCAGATGACTCCATT
GTAAATTGCCTTCAACCACATCCAAGAACATGTATGTTAGCAACGAGTGGGATTGATCCA
ATAGTGCGCCTGTGGAGTCCAAAGCAGATTGCTTCCGATGACCGGGCGGTCGCAGAGACT
GAAAGTGCAGCAGAAGCAAATCAGAAAAGGATGAATGAAGATCCTCTTGAAGCGATTGAA
GATGGGCTTCGGAATGGGTTTTGCTGTGGGAAT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-286] 6.0E-38 - T[440-564] 1.2E-12 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[3-259] 4.07E-54 - T[448-525] 4.07E-54 |
| SMART |
WD40_repeat (IPR001680) - T[3-42] 1.7E-9 - T[45-87] 4.2E-4 - T[90-129] 12.0 - T[140-180] 4.1 - T[441-484] 1.9 - T[487-526] 0.0017 |
| Pfam |
WD40_repeat (IPR001680) - T[7-42] 1.0E-7 - T[446-483] 0.0033 - T[490-526] 0.031 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[10-138] 18.932 - T[464-535] 12.736 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[10-51] 15.454 - T[464-493] 9.239 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[287-439] 1.3E-23 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[292-406] 1.02E-20 |
| SMART |
TPR_repeat (IPR019734) - T[295-328] 31.0 - T[329-365] 28.0 - T[366-399] 130.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[295-399] 10.574 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCAF8_HUMAN | 31.321 % | 129 | 1.6E-31 |
| WDTC1_HUMAN | 46.254 % | 532 | 0 |
| DCAF6_HUMAN | 29.167 % | 134 | 4.49E-33 |