- Transcript 'Cisavi.CG.ENS81.R134...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R134.62-11319.05598.t
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
R134 [61 / 11,319]
Amino acid sequence
Length: 347
>Cisavi.CG.ENS81.R134.62-11319.05598.p
QGFFRRTIRLKLEYETCMEACTVSIKSRNKCQFCRFKKCIGLGMSRDAIRFGRMPRHEKQ
QIIREIDESFAQATGSDKCQIKMQNLITEVSESFLRHISLTAERVNKCWESRKTLALTPD
HKARLLFASQILKKRTQKGSGPSSKPLKIVQILYCDFQARVVKGICELTEFAKSLPNFLR
ISLHDQVILLKYGSYETMFVLFSRLIIEDGMLLPKSNIYVTFNFVYQVSKMVGEIMRSKF
EFAKRMLSLGLTDVEMALFVGVILLCPDRPGIDNRKVVEDIQEEILLALEYQLSLTHPNK
PRLFAHLLLKLAELRELMSKHVSMVQKLSEMKGIGPPLLNEILQDLT
Nucleotide sequence
Length: 1,044
>Cisavi.CG.ENS81.R134.62-11319.05598.t
CAGGGATTTTTCCGTCGAACAATTCGGCTTAAGCTTGAGTATGAAACTTGCATGGAAGCT
TGCACGGTTAGCATAAAGAGCCGAAATAAGTGTCAATTTTGCCGCTTCAAAAAATGCATT
GGCCTCGGAATGTCTCGAGATGCCATTCGATTTGGTCGTATGCCTCGTCATGAGAAACAG
CAAATTATTCGAGAAATTGATGAATCATTCGCTCAAGCCACAGGCTCGGACAAGTGTCAG
ATAAAAATGCAAAATCTTATCACTGAAGTTTCGGAATCGTTTTTGCGACATATTTCACTG
ACAGCTGAAAGGGTGAATAAATGTTGGGAGTCGCGGAAAACACTTGCATTGACCCCGGAC
CACAAAGCACGGCTTCTTTTCGCTTCGCAAATTTTGAAAAAAAGAACCCAGAAAGGTTCT
GGACCGTCTAGTAAACCACTTAAGATTGTCCAAATCCTCTACTGCGACTTTCAGGCGCGA
GTTGTCAAAGGAATTTGTGAGTTAACCGAATTTGCAAAGTCCCTGCCCAATTTCCTACGA
ATTAGTCTGCATGACCAGGTGATCCTGTTAAAATATGGGAGCTACGAAACGATGTTCGTT
TTGTTCAGTCGTCTTATAATCGAGGACGGTATGCTACTTCCCAAATCCAATATCTATGTC
ACTTTTAATTTCGTGTATCAGGTTAGTAAGATGGTGGGTGAAATTATGAGGTCGAAATTT
GAGTTTGCGAAAAGAATGCTTTCTCTCGGACTTACTGATGTGGAGATGGCTTTGTTTGTG
GGAGTCATTCTCTTGTGTCCAGATCGGCCTGGGATTGACAATCGCAAAGTGGTGGAAGAC
ATACAGGAGGAGATACTGTTGGCGTTGGAATACCAACTCTCTCTCACACACCCAAATAAA
CCAAGGTTATTTGCGCATCTGCTTCTAAAGTTGGCAGAGCTGAGGGAACTAATGTCGAAA
CACGTATCCATGGTGCAGAAACTAAGCGAAATGAAGGGTATCGGGCCTCCTTTATTGAAC
GAGATTCTGCAAGATTTAACATGA
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[1-51] 10.558 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[1-70] 4.3E-18 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[2-46] 4.3E-10 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[2-47] 9.8E-6 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[40-50] 3.9E-21 - T[160-181] 3.9E-21 - T[181-197] 3.9E-21 - T[249-264] 3.9E-21 - T[306-323] 3.9E-21 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[125-345] 2.36E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[157-178] 3.2E-8 - T[183-202] 3.2E-8 - T[249-271] 3.2E-8 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[159-318] 6.3E-21 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[168-323] 1.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 39.205 % | 243 | 2.96E-76 |
| PPARD_HUMAN | 37.64 % | 241 | 1.43E-76 |
| PPARA_HUMAN | 38.571 % | 231 | 2.31E-72 |