- Transcript 'Cisavi.CG.ENS81.R134...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R134.62-11319.05597.t
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
R134 [61 / 11,319]
Amino acid sequence
Length: 348
>Cisavi.CG.ENS81.R134.62-11319.05597.p
QGFFRRTIRLKLEYETCMEACTVSIKSRNKCQFCRFKKCIGLGMSRDAIRFGRMPRHEKQ
QIIREIDESFAQATGSDKCQIKMQNLITEVSESFLRHISLTAERVNKCWESRKTLAAPWI
TLTEHLVKMYPDSGNTDTNSHKTAPATQKIVQILYCDFQARVVKGICELTEFAKSLPNFL
RISLHDQVILLKYGSYETMFVLFSRLIIEDGMLLPKSNIYVTFNFVYQVSKMVGEIMRSK
FEFAKRMLSLGLTDVEMALFVGVILLCPDRPGIDNRKVVEDIQEEILLALEYQLSLTHPN
KPRLFAHLLLKLAELRELMSKHVSMVQKLSEMKGIGPPLLNEILQDLT
Nucleotide sequence
Length: 1,047
>Cisavi.CG.ENS81.R134.62-11319.05597.t
CAGGGATTTTTCCGTCGAACAATTCGGCTTAAGCTTGAGTATGAAACTTGCATGGAAGCT
TGCACGGTTAGCATAAAGAGCCGAAATAAGTGTCAATTTTGCCGCTTCAAAAAATGCATT
GGCCTCGGAATGTCTCGAGATGCCATTCGATTTGGTCGTATGCCTCGTCATGAGAAACAG
CAAATTATTCGAGAAATTGATGAATCATTCGCTCAAGCCACAGGCTCGGACAAGTGTCAG
ATAAAAATGCAAAATCTTATCACTGAAGTTTCGGAATCGTTTTTGCGACATATTTCACTG
ACAGCTGAAAGGGTGAATAAATGTTGGGAGTCGCGGAAAACACTTGCTGCCCCTTGGATT
ACTCTCACTGAACACTTGGTAAAAATGTACCCCGATTCTGGCAATACCGATACAAACTCC
CACAAAACTGCTCCTGCAACTCAAAAAATTGTCCAAATCCTCTACTGCGACTTTCAGGCG
CGAGTTGTCAAAGGAATTTGTGAGTTAACCGAATTTGCAAAGTCCCTGCCCAATTTCCTA
CGAATTAGTCTGCATGACCAGGTGATCCTGTTAAAATATGGGAGCTACGAAACGATGTTC
GTTTTGTTCAGTCGTCTTATAATCGAGGACGGTATGCTACTTCCCAAATCCAATATCTAT
GTCACTTTTAATTTCGTGTATCAGGTTAGTAAGATGGTGGGTGAAATTATGAGGTCGAAA
TTTGAGTTTGCGAAAAGAATGCTTTCTCTCGGACTTACTGATGTGGAGATGGCTTTGTTT
GTGGGAGTCATTCTCTTGTGTCCAGATCGGCCTGGGATTGACAATCGCAAAGTGGTGGAA
GACATACAGGAGGAGATACTGTTGGCGTTGGAATACCAACTCTCTCTCACACACCCAAAT
AAACCAAGGTTATTTGCGCATCTGCTTCTAAAGTTGGCAGAGCTGAGGGAACTAATGTCG
AAACACGTATCCATGGTGCAGAAACTAAGCGAAATGAAGGGTATCGGGCCTCCTTTATTG
AACGAGATTCTGCAAGATTTAACATGA
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[1-51] 10.558 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[1-70] 4.3E-18 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[2-46] 4.3E-10 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[2-47] 9.8E-6 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[40-50] 4.0E-21 - T[161-182] 4.0E-21 - T[182-198] 4.0E-21 - T[250-265] 4.0E-21 - T[307-324] 4.0E-21 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[141-346] 1.22E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[158-179] 3.2E-8 - T[184-203] 3.2E-8 - T[250-272] 3.2E-8 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[160-319] 6.3E-21 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[168-324] 1.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 38.068 % | 250 | 4.17E-79 |
| PPARD_HUMAN | 37.037 % | 243 | 2.43E-77 |
| PPARA_HUMAN | 37.607 % | 233 | 6.27E-73 |