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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Moocci.CG.ELv1_2.S53...'
  3. Transcript 'Harore.CG.MTP2014.S1...'
  4. Transcript 'Cisavi.CG.ENS81.R234...'
  5. Transcript 'Cisavi.CG.ENS81.R1.3...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.3440586-3457414.18665.t

Possible name(s)

PTPN23; RHPN1; RHPN2

Location

R1 [3,440,585 / 3,456,923]

Sequences

Amino acid sequence

Length: 530

>Cisavi.CG.ENS81.R1.3440586-3457414.18665.p
SLIQGCNPIMATQRSKMQSHRTVINQQLNKQMRLRAGAENLFNATENLKVKETVALELSF
VNSNLQLLKEELSELNSTVEPYQSTRQTVSIPLVPLGLKDTKELVFAQTFEDYISEHYSE
DPESFSEEIADFADLRNSTRTPSRNHDGAVLLLEYYNQLYFIENRFFPPYKPLGVYFHWY
DSITGLPAAQRSISLEKASTLFNLGALYSQIGTRADRTRRRGIEIAVDSFQHAAGAFNYL
KLNFSNAPTADLSHSILSALMWLMLAQGQECVLEMRVLGGFEIELGKCASVAQEAIKVSD
KYNLAFKSMNSDVTKPIVPYTWLNMSEVKTHHYRALAHYYAAIGLLEQHAEPLEITKLME
SLYLNRDDDIPGPDDVAKRKEDRRRLGKSHLRQSVYYHERALQTHSLCKLPRTNDVLKEY
LQHAHTRSVVKLDEMDSEEDFFDIVEAPDIQGRVARAGPLSLFSVHHRLGAHRTITLSND
EHVCSFTLQGESPVSITKLDLKAKQLGLRNEDIILSVNDEDVRWYGHNQV

Nucleotide sequence

Length: 1,590

>Cisavi.CG.ENS81.R1.3440586-3457414.18665.t
TCATTAATCCAGGGTTGTAATCCGATCATGGCGACTCAGCGCAGTAAAATGCAAAGTCAC
CGCACCGTCATAAACCAACAACTTAACAAACAGATGAGACTTAGAGCTGGAGCTGAAAAT
TTATTCAATGCCACTGAAAATCTCAAGGTTAAAGAGACGGTAGCTTTGGAACTGAGCTTT
GTCAATTCAAACCTGCAGCTTCTGAAGGAAGAATTGAGTGAATTAAACTCCACTGTTGAG
CCCTACCAGAGCACAAGGCAAACAGTCAGCATCCCGTTGGTTCCTCTTGGCTTGAAAGAT
ACAAAAGAACTCGTGTTTGCACAAACTTTTGAAGATTACATTTCGGAACACTACAGCGAG
GACCCCGAGTCGTTCTCGGAAGAAATCGCTGATTTCGCGGATTTGCGCAACTCGACACGA
ACACCGTCCCGCAACCACGACGGAGCGGTCCTACTGCTCGAATACTACAACCAGTTGTAC
TTTATCGAAAACCGATTTTTTCCGCCCTACAAACCGCTGGGCGTATACTTTCATTGGTAC
GATTCAATCACGGGTCTGCCAGCTGCGCAGAGGTCGATTTCACTCGAGAAAGCAAGCACC
CTGTTCAACTTGGGAGCCCTGTATTCACAAATCGGTACCCGCGCCGACAGAACACGAAGG
CGAGGCATTGAAATCGCCGTGGATTCTTTCCAACACGCTGCAGGTGCGTTCAACTACCTC
AAGTTGAACTTCAGCAACGCGCCGACGGCTGACCTCAGCCACTCGATACTTAGCGCCCTC
ATGTGGTTGATGCTGGCTCAGGGACAGGAGTGCGTTCTGGAGATGCGAGTGTTGGGAGGA
TTCGAGATCGAACTCGGGAAGTGCGCCTCGGTTGCTCAGGAGGCGATAAAAGTTTCTGAC
AAGTACAACCTGGCGTTCAAATCAATGAACAGTGACGTCACAAAGCCGATTGTCCCGTAC
ACGTGGCTGAATATGAGCGAAGTGAAGACGCACCACTATCGAGCCCTTGCTCATTACTAC
GCAGCTATTGGTCTGCTGGAACAACACGCGGAACCGCTTGAAATAACGAAGTTAATGGAA
AGTTTATATTTAAATCGTGATGACGACATTCCCGGTCCTGATGACGTGGCAAAGAGGAAA
GAAGATCGACGTAGATTAGGAAAATCACATCTTCGGCAATCAGTGTACTACCACGAGAGG
GCGCTACAGACACACAGTTTATGCAAATTACCTCGGACGAACGACGTATTAAAGGAATAT
TTGCAACACGCCCACACGAGGTCAGTAGTGAAACTGGATGAGATGGATTCTGAGGAAGAC
TTCTTTGACATTGTTGAAGCACCTGATATACAAGGTCGGGTTGCTAGGGCTGGTCCGCTC
TCGTTATTCTCCGTCCACCACCGCTTGGGGGCGCACCGAACAATCACCTTAAGTAATGAC
GAACATGTTTGTTCGTTTACTTTGCAAGGGGAATCCCCAGTTTCAATAACCAAACTTGAC
CTCAAAGCGAAGCAACTGGGTCTTCGCAACGAAGATATCATTTTATCCGTGAATGATGAA
GATGTGAGATGGTATGGTCATAATCAAGTT

InterProScan

SUPERFAMILY
HR1_rpt_sf (IPR036274) - T[2-78] 1.57E-15
SMART
HR1_rho-bd (IPR011072) - T[19-82] 1.6E-9
Pfam
HR1_rho-bd (IPR011072) - T[21-83] 6.7E-16
Gene3D
BRO1_sf (IPR038499) - T[85-381] 1.9E-81
ProSiteProfiles
BRO1_dom (IPR004328) - T[92-438] 43.239
SMART
BRO1_dom (IPR004328) - T[92-470] 7.3E-116
Pfam
BRO1_dom (IPR004328) - T[93-450] 2.8E-77
SUPERFAMILY
PDZ_sf (IPR036034) - T[462-530] 2.4E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHPN2_HUMAN 42.935 % 451 1.56E-152
RHPN1_HUMAN 39.012 % 387 3.95E-127
RHN2P_HUMAN 37.895 % 315 7.51E-101