- Transcript 'Boleac.CG.SB_v3.S25....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S25.g05988.01.t
Possible name(s)
BOP1; PLRG1; POC1B
Gene model
Location
S25 [412,579 / 414,700]
Amino acid sequence
Length: 706
>Boleac.CG.SB_v3.S25.g05988.01.p
MAGVKNKRKLDDNKKPDFSVDSIALEQSTDDEENSDIDSSSDESEINEDLAPVELEADSN
EVRVAKQNDEEDTSDEEDVRNTVGXIPMQWYENFPHIGYDLDGKKIGKPIRNMDELDKFL
DRMDNPDYWRTIYDESTARDHKLTPEEIQLIERLESGNFYDPKMDPYEPYEDMFTHEKMI
HPINNAPAHKRSFTPSLHEKLKVGKLVHALKMGWLKPRKEKKESEVRFYDLWADTKDEKL
SHSQWARKKMHIPAPKTKLPGHEASYNPPPEYLMTEDERLAWEAMDPEDRRINFIPQKFD
CLRKVPQYSQFIQEAFSRCLDLYLCPRQRKMRVNVNPEDLIPKLPKPSELQPFPTVQSLC
YKGHEGIVRTISVHESGQWIASGSDDKTIRVWEVATARCLRIITTEHVVKCVAWCPNANV
CLLTAVMDNSVAVINPYVGDKLVCQATDQLINSYEDGEDENVQSGDESKKFVDWTVVDPG
KEFKDGFRLILNHKKPVSKVSWHGKGDYFATILPGNGHTQVLLHQLTKRRSQNPFSKCKG
LVQCVLFHPHRPFLYVASQTYVRVYNLVKQMLTKKLIANAKWISTMAIHPKGDDVLVGSY
DCRLMWFDMDLSVKPYQTLRYHKRAIRSCCYHKKYPLFASCSDDGTVIVSHGMVYGDLLQ
NPLIVPVKVLKGHRVEKNLGVLDCCFHPTQPWVFSSAADNTIRLFS
Nucleotide sequence
Length: 2,121
>Boleac.CG.SB_v3.S25.g05988.01.t
ATGGCGGGGGTTAAAAATAAACGTAAGCTTGATGATAATAAAAAGCCTGACTTCTCTGTT
GATTCCATCGCACTCGAACAATCTACAGACGATGAAGAAAATTCTGACATTGATTCAAGC
TCTGATGAATCAGAAATTAATGAAGATCTTGCACCGGTTGAGCTCGAGGCTGATAGCAAT
GAGGTACGGGTAGCAAAACAAAATGATGAAGAGGATACGTCTGATGAAGAAGATGTTAGG
AATACTGTAGGAAANATTCCAATGCAATGGTATGAGAACTTCCCGCATATTGGGTATGAT
CTTGATGGTAAAAAGATAGGAAAACCAATCAGAAATATGGATGAACTTGATAAATTCCTC
GATCGTATGGACAATCCTGATTATTGGCGAACAATTTATGACGAAAGTACTGCTAGAGAT
CATAAACTGACGCCAGAAGAAATACAACTTATTGAAAGATTAGAAAGTGGTAATTTTTAT
GATCCTAAAATGGACCCCTATGAGCCATATGAGGATATGTTCACCCATGAGAAAATGATT
CACCCGATAAATAACGCTCCTGCTCACAAAAGAAGTTTCACACCATCATTACATGAAAAA
TTGAAAGTTGGCAAGTTGGTGCATGCATTAAAAATGGGTTGGTTAAAACCACGAAAAGAG
AAAAAAGAAAGTGAAGTCCGATTTTACGATTTATGGGCTGATACAAAAGATGAAAAGCTT
TCACACAGTCAATGGGCAAGAAAGAAAATGCACATTCCTGCTCCGAAAACTAAGCTACCC
GGACATGAAGCTTCATACAATCCACCGCCAGAATATTTGATGACAGAGGATGAAAGGCTT
GCATGGGAAGCTATGGATCCAGAAGATCGAAGAATAAATTTTATCCCGCAGAAATTTGAT
TGCTTGCGAAAGGTTCCCCAATATTCGCAATTCATACAAGAAGCATTTTCAAGGTGTTTG
GATTTGTATCTCTGTCCTAGACAGAGGAAAATGAGAGTCAACGTTAACCCTGAAGATCTG
ATTCCGAAATTACCAAAACCAAGTGAATTGCAACCGTTCCCAACTGTACAATCTTTATGC
TACAAAGGACATGAAGGTATCGTAAGGACAATATCAGTACATGAATCTGGTCAATGGATT
GCTTCTGGCAGTGATGATAAAACAATCAGGGTGTGGGAAGTCGCTACAGCAAGATGTCTA
AGGATTATAACTACTGAACATGTTGTTAAATGTGTAGCATGGTGTCCAAATGCAAACGTC
TGTTTGCTAACTGCTGTTATGGATAACTCAGTTGCTGTTATCAATCCTTATGTTGGAGAC
AAACTTGTATGCCAAGCTACTGATCAATTAATCAATTCATACGAAGATGGTGAAGACGAA
AATGTACAAAGTGGGGATGAATCAAAGAAGTTTGTTGATTGGACTGTAGTCGATCCTGGC
AAGGAGTTTAAAGATGGTTTCAGGTTGATTTTAAATCATAAAAAGCCTGTGTCAAAGGTT
TCATGGCATGGTAAAGGAGATTACTTTGCGACAATCCTTCCTGGAAATGGTCATACTCAA
GTTTTGCTTCATCAACTTACAAAACGAAGATCACAAAATCCATTCAGCAAATGCAAAGGA
CTCGTACAATGTGTTCTTTTCCACCCTCACAGACCTTTTCTTTATGTCGCTTCTCAAACT
TACGTTCGAGTATATAATTTAGTGAAACAAATGCTAACAAAAAAACTCATTGCAAATGCG
AAATGGATATCAACCATGGCCATACACCCCAAAGGAGATGATGTCCTCGTTGGAAGTTAT
GATTGCAGGCTGATGTGGTTTGATATGGATTTGTCGGTAAAACCATACCAAACTTTGAGA
TATCACAAGCGTGCGATTAGATCCTGTTGTTACCATAAGAAATATCCACTTTTTGCATCA
TGCAGTGATGACGGTACTGTCATTGTAAGTCATGGTATGGTGTATGGGGATTTGCTTCAG
AATCCATTGATTGTTCCGGTGAAAGTCTTGAAGGGACACAGGGTTGAGAAAAACTTGGGT
GTTCTTGATTGCTGTTTCCATCCCACCCAGCCTTGGGTGTTCTCATCTGCTGCTGATAAT
ACCATTCGACTGTTCTCTTGA
| Hamap |
BOP1/Erb1 (IPR028598) - T[1-706] 45.579 |
| PANTHER |
BOP1/Erb1 (IPR028598) - T[23-706] 0.0 |
| SMART |
BOP1_N_dom (IPR012953) - T[91-354] 1.7E-157 |
| Pfam |
BOP1_N_dom (IPR012953) - T[91-354] 3.4E-107 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[319-436] 3.87E-51 - T[482-706] 3.87E-51 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[344-706] 4.1E-153 |
| SMART |
WD40_repeat (IPR001680) - T[354-393] 3.3E-8 - T[396-435] 0.34 - T[484-525] 230.0 - T[528-566] 23.0 - T[569-608] 1.1 - T[612-651] 1.3E-4 - T[663-706] 2.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[360-392] 4.5E-8 - T[616-648] 0.021 - T[666-705] 3.0E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[361-402] 14.371 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[361-402] 15.855 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[380-394] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BOP1_HUMAN | 56.094 % | 821 | 0 |