- Transcript 'Cisavi.CG.ENS81.R132...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R132.1810187-1815789.11096.t
Possible name(s)
IGFALS; LRRC70; LRRTM1
Gene model
Location
R132 [1,810,186 / 1,815,789]
Amino acid sequence
Length: 528
>Cisavi.CG.ENS81.R132.1810187-1815789.11096.p
MNGISRYMVLIIAFRTLPLADSVDSKCRNSRGCENNKCRFRYRTRMLNCAAWYMDCIPQP
SSIRSAAPPEYATSMFFSDNCLRTVRAADLQRYTCLRNLNLSKNFITTLDCSFKGLSTLK
QLDLSENKISKIYEDDFSTLTNLTELNLSKNQLFQLDKNAFKNLPSLKVLDLRHNRLTTF
LPGHLSGLAKLRVFMIAHNHLQTIDQHLFTSSPHLEEIDLSSNVIQCLPQNVFELMSELK
SVKLMSNQLRTPHPHWVRRINQNEFLPQIKLLENNNWTCDCRAANYAEFLNEELVSDHQS
KWKEALNIRCSHPKRYQGALLTDVFVSRCVEPPNVKCGQLPVLRTMRSTTTPISVTTTLR
IESTTTTTTTLKTTTTTTPDIQSSNTHPQPAQEKLSRESSLIDWGSQIYPILLISILVVI
VVALILGFILWRFKVKFKKRAEKPTYNRVSSATSGISSRTNSTTTATTNGDDNTQPKTVI
HTSNYLVHAADEPTHIYQHRSRCHTDSGCYDGDTERENFYHAINGSNA
Nucleotide sequence
Length: 2,010
>Cisavi.CG.ENS81.R132.1810187-1815789.11096.t
ATGTAGAAGTAGGGTTTTCCATTACTTCTACATATATTAAATATTAAGATCTATAATATG
CAAATTAGCTGATCATGAACGGAATTTCAAGATACATGGTTCTAATCATTGCATTTCGAA
CTCTACCCTTGGCAGATTCAGTTGATTCCAAATGTAGAAATTCCAGGGGTTGTGAAAATA
ATAAATGCAGATTCAGGTACAGAACTCGCATGCTGAACTGTGCGGCATGGTACATGGATT
GCATTCCTCAGCCTTCATCTATCAGGAGTGCAGCTCCCCCAGAATATGCCACCTCCATGT
TTTTCAGCGACAATTGCTTGCGGACTGTTAGAGCAGCTGACCTGCAAAGGTATACCTGTC
TTCGAAATCTTAACTTGTCCAAAAACTTCATTACCACTCTTGATTGCAGTTTTAAAGGAT
TGTCAACATTAAAGCAATTGGATCTTAGCGAGAATAAGATAAGCAAAATATATGAAGATG
ATTTTTCAACCTTGACAAACTTGACTGAACTCAATCTCAGCAAAAACCAGTTATTCCAAC
TGGATAAAAATGCTTTTAAAAATCTTCCATCGTTGAAAGTTCTAGACTTGCGTCACAATA
GATTGACTACATTTCTTCCCGGTCATTTAAGTGGACTTGCAAAACTGAGAGTATTCATGA
TCGCCCACAATCACCTCCAAACCATCGATCAACATTTATTCACTTCTTCCCCCCATCTAG
AAGAGATCGATCTCAGTTCCAATGTCATCCAATGCTTACCACAGAATGTGTTTGAGCTCA
TGAGCGAGCTTAAATCGGTGAAACTGATGTCGAATCAACTACGCACCCCCCACCCCCACT
GGGTGCGCAGAATCAACCAGAATGAATTCCTTCCTCAGATCAAACTCCTGGAGAACAACA
ACTGGACGTGTGATTGTCGGGCAGCGAATTACGCGGAATTCTTGAATGAAGAACTGGTAT
CTGACCACCAATCGAAATGGAAGGAAGCACTGAACATACGATGCTCCCACCCCAAGAGAT
ATCAAGGCGCTCTGCTCACTGATGTGTTCGTGTCGCGCTGTGTGGAACCTCCGAATGTTA
AATGCGGACAACTTCCTGTGCTCCGTACAATGAGAAGTACTACAACACCAATAAGCGTGA
CGACGACCTTAAGAATCGAGTCAACAACGACAACAACGACAACATTAAAGACGACCACGA
CCACCACGCCTGACATTCAGTCGTCCAACACCCACCCACAACCTGCACAAGAGAAATTAT
CACGCGAATCTTCTTTAATTGATTGGGGGAGTCAAATTTACCCCATTCTGCTGATTAGTA
TTTTGGTAGTTATCGTTGTTGCGCTCATTCTGGGTTTCATACTTTGGCGTTTTAAAGTGA
AATTTAAAAAGAGAGCGGAGAAACCGACTTACAATCGCGTGAGTTCGGCAACAAGTGGTA
TATCTAGCAGGACCAACTCTACCACGACGGCAACGACAAACGGCGATGATAATACCCAAC
CAAAGACTGTTATACACACGTCAAATTACCTTGTACATGCGGCAGACGAGCCCACCCACA
TCTACCAGCATAGATCGCGCTGTCACACTGATAGTGGTTGTTATGACGGTGATACCGAGA
GGGAAAACTTTTACCACGCCATTAATGGCTCCAATGCATAAACTTAGTGCCCTGCCCATA
AATTCGAGTTGATTTTTACCTTTATTGTTTTTTCTACTAGTTCATATAAATACATTTTTA
AAGTTCAAATAATGTGTATACCAATCAGTAGGATATTTTAATACTTTTCTGTTGTATATG
TGCCACTGTTATACATAGCCTCGCATATTAATACATTTTAACCGTCCTAAACATTGCTGA
TCGCTTATTTTTACACTTTATACTTTGCTTATCTTACAAAGTCGTATGCACTCCGAATTA
TAACAAGTGCTTGTTTAACGTTATGTTTATATAGCCAACGCTATTTTATTAGTTGCCTTT
CAATCCCGCGTAGACCTTAATAGTAATCGC
| Gene3D |
LRR_dom_sf (IPR032675) - T[33-206] 2.1E-36 - T[207-338] 1.4E-16 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[93-115] 310.0 - T[116-139] 17.0 - T[140-163] 0.0023 - T[164-187] 0.35 - T[188-211] 4.4 - T[213-235] 6.0 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[95-117] 6.387 - T[118-139] 8.074 - T[142-163] 7.258 - T[166-189] 6.634 - T[190-211] 5.209 - T[214-235] 6.757 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[117-130] 1.5 - T[141-201] 1.8E-15 - T[212-225] 1.6 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[275-328] 8.0E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALS_HUMAN | 33.333 % | 89 | 1.38E-18 |
| LRR70_HUMAN | 24.062 % | 93.6 | 3.96E-20 |
| LRRT1_HUMAN | 27.003 % | 90.5 | 2.84E-19 |
