- Transcript 'Cisavi.CG.ENS81.R13....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R13.1998803-2001623.12772.t
Possible name(s)
NPLOC4
Gene model
Location
R13 [1,998,802 / 2,001,623]
Amino acid sequence
Length: 534
>Cisavi.CG.ENS81.R13.1998803-2001623.12772.p
MIIRVQSSAGTKRIEVSSSDTLISLHQQVEKTFSLESNDWGLYKSRDYQKEIKKTKSKLK
TAGLNHGDMLYLKTAGPGANDLRPNSSGESVIVIEDEIDVEIGKMDGRIRRDQENKGMFK
IENLPIEPWDEAYLKEKEIKFLSFHAYMRQQTAGVDKGKYFRLENFKAARKLDANSTQHS
VVDLPSAVTLNRQKFRHVDNIVFENREIVDRFLNYWRNSGNQRMGFLYGRYTPHSEVPLG
IKAEVCAIYEPPQESTKNSLQFHPDPNEEAVEYIARKLNLQKIGWILSDLTAADPATGTV
KNTRHSETHFLTAEECITAATFQNRYPNPCKLAPNGKYGSKFTTVIVSGDNDCQISFEGY
QVSNQGMSLVADNCLVPTLDAPELGYIMESSPELFVSDVYYKQKDKYGNEITKLARPLPL
EYLLTDVPTAFSLKSQFTCSNSIDGFAASNRDSIGEMQSLSTLSKYLNKFKPEQFVDAVS
DFHLLVYLYCNDTISFKNEMDVLLDAVCSHDNILASHWKDCASWSTLEELMRHS
Nucleotide sequence
Length: 1,979
>Cisavi.CG.ENS81.R13.1998803-2001623.12772.t
ATGATTATACGAGTGCAGTCCTCAGCTGGGACAAAGCGGATTGAAGTATCCAGCAGTGAT
ACACTTATCTCTTTACACCAGCAAGTGGAGAAAACGTTTAGTCTCGAAAGCAACGATTGG
GGACTGTACAAATCGAGAGATTACCAGAAAGAAATAAAGAAGACGAAAAGCAAATTAAAA
ACTGCAGGGTTAAACCACGGGGATATGCTGTATTTGAAGACAGCAGGTCCGGGTGCAAAT
GACCTGCGACCAAACTCTAGTGGGGAGTCGGTTATCGTCATTGAGGACGAAATTGATGTT
GAAATCGGGAAAATGGATGGAAGGATTCGTCGAGATCAGGAGAACAAAGGGATGTTTAAA
ATTGAGAACCTTCCGATCGAACCTTGGGATGAGGCGTATTTGAAGGAAAAAGAGATTAAA
TTCTTGTCGTTTCATGCCTACATGCGGCAACAGACTGCCGGCGTCGACAAAGGAAAATAT
TTCCGGCTTGAAAATTTCAAAGCAGCACGAAAACTGGATGCGAACAGCACTCAGCATTCT
GTTGTTGACCTGCCGTCGGCTGTCACGCTGAACCGACAGAAGTTTCGTCATGTTGACAAT
ATCGTGTTCGAAAATCGCGAAATTGTAGATCGCTTCTTGAACTACTGGAGAAATTCTGGT
AACCAACGAATGGGGTTTCTGTACGGACGCTACACCCCCCATTCTGAAGTCCCACTTGGT
ATAAAAGCGGAGGTATGTGCGATCTATGAACCGCCACAGGAAAGCACGAAAAACTCACTT
CAATTCCACCCTGATCCCAATGAAGAGGCCGTCGAGTACATCGCTAGGAAGTTAAATTTA
CAAAAAATCGGTTGGATTTTGTCCGACCTTACTGCGGCCGACCCAGCGACAGGTACCGTC
AAAAACACTCGGCACTCCGAAACGCATTTTCTGACCGCCGAAGAATGCATCACTGCTGCT
ACATTCCAAAACCGATATCCCAACCCTTGCAAACTGGCACCAAACGGAAAGTACGGCTCG
AAGTTCACCACCGTTATTGTGTCCGGGGACAATGACTGTCAGATTTCATTTGAGGGTTAT
CAGGTATCGAATCAGGGGATGTCCCTGGTGGCGGACAATTGTTTGGTTCCTACCCTAGAT
GCTCCTGAACTTGGTTATATCATGGAAAGCTCACCGGAGCTATTTGTGTCCGATGTTTAC
TACAAGCAAAAGGACAAATACGGGAACGAGATTACGAAATTAGCTCGACCTTTACCACTG
GAATACCTGCTTACTGATGTACCTACAGCCTTTTCTCTCAAGTCTCAGTTCACCTGTAGC
AACTCCATTGATGGCTTCGCCGCGTCAAACCGTGATTCTATCGGAGAAATGCAATCTCTT
TCCACTTTATCAAAGTATCTCAATAAATTTAAACCAGAGCAATTCGTGGACGCAGTCTCA
GATTTTCACCTATTAGTTTACTTGTACTGCAATGACACCATATCATTTAAGAATGAGATG
GATGTGCTGTTAGATGCAGTCTGCTCGCATGACAACATCCTCGCCTCGCACTGGAAGGAT
TGTGCCAGCTGGTCGACACTCGAGGAGCTAATGAGACACTCGGACATTCCCATGGACACA
GCTTCGTCATCCCACCACACGATGGACGCCGAGATGCGAGAGGCAATTGAACGGAGCTTG
CAAATGCAGTGACGTCCAATTTTACCCCAGAAACCCGAATTTGTAAGTTTCAAATGAACC
AATTTGAACTGATAGATCTGTGCAATTTAGGTAATTCAAACAAAAATTGATATGTTTGCC
ATGTTTAATAATAATCGGAATTTGATAAATTTCAAAAATTTTTTGGAGCAACGTCTGACT
GAAACTGGTTGTTGTATTTAATATTTTCCGCTGTGATTTGCGTTCAAAAGTTCTTTTTTG
TGCTTCATCTGCTGTTATAATCGTCATATATAGTTCAATACAGTAAATACAATGAAATA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-77] 1.35E-11 |
| Pfam |
Npl4_Ub-like_dom (IPR024682) - T[1-74] 7.2E-21 |
| PIRSF |
Npl4 (IPR016563) - T[1-534] 2.6E-146 |
| Pfam |
NPL4_Zn-bd_put (IPR007716) - T[93-220] 1.0E-28 |
| CDD |
NPL4_C (IPR007717) - T[189-488] 9.54864E-122 |
| ProSiteProfiles |
MPN (IPR037518) - T[201-338] 26.914 |
| Pfam |
NPL4_C (IPR007717) - T[223-531] 3.0E-105 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPL4_HUMAN | 45.931 % | 496 | 3.98E-171 |