- Transcript 'Boleac.CG.SB_v3.S165...' >
- Transcript 'Cisavi.CG.ENS81.R13....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R13.1866428-1874467.12144.t
Possible name(s)
CR1L; SELE; SELP
Gene model
Location
R13 [1,866,427 / 1,874,467]
Amino acid sequence
Length: 574
>Cisavi.CG.ENS81.R13.1866428-1874467.12144.p
MKHLVAILVIFVSTTKALKCITCENARSHAECDANGKTVTCRYNELSCAIEERTLNLGPE
KLIFKHCKQPNACQNNEIQNPRPAWWPTQCNRKIPNTVCRCCCKEDLCNVGPDKCFNRIS
NECSPPHSNPRFGEVTCSKSNEIGSLCSFKCDDGYVMSGASTSTCGENGAWSSPAPSCAS
IRCPRIGSSSARSVDCSKDTLLGSVCRFTCDEGFELIGSQSITCRDDTDGDAIGSWSSLP
PTCRQTTCLSPPAAPENGYIACSDSNKIGSVCEFACNDFYARNGSLYTTCVEDGSVPMWN
NPTPVCERISCADQGVLPHGETTCADSNFVNSECEFRCTGNQYFLSPSNVTSNVCLNSTS
WNQPKPCCARSCPPVALFDMVVIMDSSSSVGDAAWDIMKSFVISVAGLYEVAEDSMAFAI
FRYNKLIDELSSIPLTSNLVDKATLLNQINAIPYDGEGNRTGQALTYAREVVLTGTGNRG
YAKDVVLLLTDGVSQDEVVEPSKQLRDDGVLVYTVGIIPPSGRLDTGHLIEIAGSIDHVF
IANNGFDDLTPAFAREISEHMCGDPCDHVLHDHV
Nucleotide sequence
Length: 1,964
>Cisavi.CG.ENS81.R13.1866428-1874467.12144.t
CTCCGTGTTGTGGTAGGTACCTGTGAAACGGTATTACTCACGAATTTGAATCATTTTAGA
AAATATTTTTAAGAAAATGAAACATCTCGTGGCAATTCTCGTTATTTTTGTTTCAACAAC
AAAAGCATTGAAATGCATCACGTGCGAAAACGCGAGGTCTCACGCCGAATGTGATGCAAA
TGGAAAAACAGTAACTTGCAGATATAACGAGCTTTCCTGCGCAATTGAAGAAAGAACTTT
AAATCTGGGTCCTGAAAAATTGATTTTCAAGCACTGTAAACAACCAAATGCATGCCAGAA
CAATGAAATCCAGAACCCTCGACCGGCTTGGTGGCCAACCCAGTGTAATAGGAAGATACC
GAACACAGTGTGTAGATGTTGTTGTAAGGAGGATCTTTGCAACGTCGGTCCCGACAAGTG
CTTTAACCGTATATCCAATGAATGCTCGCCACCTCACTCCAATCCACGATTTGGTGAAGT
CACGTGTTCCAAAAGCAACGAGATCGGCAGCCTGTGCTCATTTAAGTGTGACGATGGCTA
CGTCATGTCCGGCGCTTCGACGTCGACTTGTGGTGAAAATGGGGCTTGGAGCTCTCCGGC
GCCATCTTGTGCATCAATCCGATGTCCGAGAATCGGAAGTTCTAGTGCTCGCTCAGTTGA
CTGTTCCAAGGATACTCTTCTGGGAAGCGTTTGCAGATTTACTTGTGACGAAGGTTTCGA
ATTGATTGGCTCACAATCGATCACGTGCCGTGACGACACCGATGGAGATGCAATCGGTTC
GTGGAGCTCTCTGCCGCCAACTTGCAGACAAACGACATGTCTGAGTCCACCAGCGGCCCC
AGAGAACGGATATATCGCATGCAGCGATTCCAATAAGATTGGCTCGGTTTGCGAGTTCGC
CTGTAACGACTTTTATGCTCGAAATGGATCATTATATACAACTTGCGTTGAAGATGGCTC
TGTTCCCATGTGGAACAACCCTACACCTGTATGCGAACGGATCTCGTGTGCCGACCAAGG
GGTTCTACCGCATGGGGAAACCACCTGCGCAGATTCTAACTTCGTGAACTCGGAGTGTGA
GTTCAGGTGCACGGGAAACCAATACTTCCTGTCCCCGAGTAACGTTACTTCCAACGTTTG
CCTCAATAGTACATCATGGAACCAACCAAAACCGTGCTGCGCCCGTTCTTGCCCTCCCGT
GGCTTTATTCGACATGGTAGTGATCATGGATTCGTCGTCATCTGTAGGCGACGCTGCATG
GGACATCATGAAAAGTTTCGTCATTTCCGTAGCGGGCTTATACGAAGTCGCTGAAGACTC
GATGGCTTTTGCCATTTTCCGATACAACAAACTGATTGACGAGCTATCCAGCATACCCCT
TACCAGCAACTTGGTGGATAAAGCCACCCTTTTGAATCAAATTAACGCAATTCCTTATGA
CGGAGAGGGTAACCGAACTGGCCAAGCGCTCACATACGCTCGAGAAGTCGTGTTGACTGG
AACTGGGAATCGGGGTTATGCGAAAGACGTTGTCCTACTTCTCACTGATGGGGTTTCCCA
AGATGAAGTAGTAGAGCCATCCAAGCAGCTCAGAGACGACGGGGTTTTGGTTTACACAGT
TGGAATCATACCACCTAGCGGTCGACTGGACACTGGTCATCTTATTGAGATCGCGGGCTC
CATTGATCACGTGTTCATCGCCAACAATGGTTTCGATGATTTGACCCCCGCTTTTGCCCG
AGAGATCAGTGAACACATGTGCGGTGATCCATGCGATCACGTGCTCCACGACCACGTCTG
ATTGGTCGGTTTGAATTCACTCTTTGTGATGTGCAATTTTACATATTACGCCAAAATGTT
ATCAACTGCATCGTTGAAATATACTTTGTATTAATTTGAAAAGCTGTTTCAAAAGTCACG
ATTGAATATTTAGACTATAATTGCTAAGGCGAAAATATCATTTC
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[121-180] 11.027 - T[181-245] 10.25 - T[246-308] 9.235 - T[309-370] 7.257 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[123-186] 9.17E-14 - T[181-253] 5.84E-13 - T[251-320] 1.38E-13 - T[309-372] 4.86E-7 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[123-178] 4.9E-10 - T[194-243] 1.4E-6 - T[251-306] 7.2E-6 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[123-178] 1.3E-12 - T[183-243] 3.7E-11 - T[248-306] 9.7E-9 - T[311-368] 1.0 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[123-178] 6.43285E-13 - T[183-244] 6.73006E-10 - T[250-307] 1.10785E-8 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[372-565] 2.38E-36 |
| SMART |
VWF_A (IPR002035) - T[377-561] 1.1E-19 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[378-568] 1.4E-33 |
| Pfam |
VWF_A (IPR002035) - T[379-545] 6.5E-28 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[379-557] 21.893 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 34.171 % | 92 | 3.3E-19 |
| LYAM3_HUMAN | 28.383 % | 102 | 7.48E-23 |
| LYAM2_HUMAN | 30.315 % | 100 | 3.0E-22 |