- Clone 'cieg050j03' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Clone 'ma105g13' >
- Transcript 'Moocul.CG.ELv1_2.S61...' >
- Transcript 'Cisavi.CG.ENS81.R131...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R131.263992-288199.05605.t
Possible name(s)
COL1A1; COL1A2; COL2A1
Gene model
Location
R131 [263,991 / 288,114]
Amino acid sequence
Length: 1,459
>Cisavi.CG.ENS81.R131.263992-288199.05605.p
YIEFLISSVWFLKDLFESTLILVVVKSDSDVDLGGGCVYKGEVYNAGDVFKPTKCEVCVC
DEREVVCDFILCEVLTCPFQISIEGQCCKVCGDGPVILHLLLFQGEGPPGSQGLPGERGT
SGRDGNPGVPGNPGPPGPPGPGMDSVSGYNVHGLANSYSSGNKGPSGVIAGQPGAMGPRG
QPGVSGSPGPQGFQGPPGEPGEAGPSGPPGHMGPAGIPGKDGKDGKDGRPGKTGPIGSHG
PQGPRGFAGTPGLPGAKGHKGHAGLNGLKGESGLPGADGESGAVGEAGPPGITGPRGLPG
DRGRSGPAGEPGARGSDGLPGQSGPPGPTGNSGPPGFPGSPGSKGEGGPTGARGPEGPQG
SRGEAGTPGSSGPAGLPGSPGIDGASGAKGSTGASGIAGLPGIPGPRGSPGPQGNIGSSG
PKGNTGNPGVQGFRGDQGPKGSQGSTGPQGLQGVQGEEGKRGSRGESGPPGQMGSQGERG
QPGNRGFPGQDGSSGPKGASGRRGKPGLSGPKGSVGDVGRSGEPGLPGPRGLTGKPGSDG
RQGKQGPSGPAGEDGRPGPSGATGQKGPPGQIGFPGSKGVGGEPGKSGEKGIAGPPGSRG
LAGKDGEIGPAGQPGPSGVAGDRGEAGQPGPPGFQGLPGPPGPNGEPGKAGETGVPGEVG
PSGEAGPRGERGFPGEAGSTGPQGLTGPRGAAGIPGSDGQKGQVGPLGPPGEAGPQGVQG
TTGRRGPAGLSGSKGERGDSGPPGLEGEPGKEGLRGLTGPLGPPGAQGPNGEKGDGGNVG
PEGATGPRGSPGERGEPGPDGPPGYPGSPGSEGQPGKKGDSGSRGVKGDSGAPGLQGPAG
GAGPLGPPGVAGRRGARGALGAPGPAGFPGPAGRPGAPGDQGASGQQGNPGEPGKPGSKG
ASGDEGPPGPQGAFGLQGLPGQPGEPGPSGEPGAPGGPGASGLRGNPGSSGNPGLPGPSG
SPGERGPAGLQGEEGKQGRSGLPGDRGPPGDIGPVGPAGPSGDSGPEGMPGPEGAPGRDG
STGVKGEIGERGHTGPPGQAGMPGPPGLHGIEGKSGPRGEPGPSGSQGAPGPEGGRGVPG
PQGSRGDTGKTGDAGPRGSKGHRGYSGLQGLPGKTAIQGDAGQPGAAGPQGLRGATGLRG
PAGNDGSPGSPGPIGPTGPRGQSGEDGMRGPTGREGPPGPPGPPGPGIDMAAFRFPAVSS
FKGPNVAADQPVTSDVGRDPEMMLVLKELTSSVEDIKAPRGVSRKTPARSCLDIYLAEQQ
QGTVPKSGVRWIDPNGGCNADGLEVYCNFHTMETCVYPTNRNIENGTHYTGEPGHTYYGE
EMTDGSTVSYDPPAASRVEHADYASQLTFLRLLSSKAKQQVTFFCRNMVAYYDASADNKA
QALKLRGFGDAEFTAEGAVGTTYRVLHDGCSTRPTQWDRTEIEFETRLVGRMPITDIAPF
DIGDADQQFGAKFGPVCFK
Nucleotide sequence
Length: 4,724
>Cisavi.CG.ENS81.R131.263992-288199.05605.t
TACATTGAGTTTCTCATAAGTTCAGTCTGGTTTTTAAAAGACCTTTTCGAAAGCACCCTA
ATTTTAGTGGTTGTAAAATCAGATTCAGATGTAGACTTGGGCGGCGGATGCGTTTACAAA
GGCGAGGTATACAACGCCGGCGACGTATTCAAGCCGACCAAGTGCGAGGTGTGCGTATGC
GACGAACGTGAGGTCGTCTGCGACTTCATCCTTTGTGAAGTGCTAACCTGCCCTTTCCAA
ATAAGCATTGAGGGACAGTGCTGTAAAGTCTGTGGCGACGGACCAGTAATACTCCATCTT
TTACTTTTCCAGGGAGAAGGACCACCTGGATCTCAAGGCTTACCAGGAGAACGAGGTACA
TCAGGCAGAGATGGAAACCCTGGCGTCCCAGGAAACCCCGGACCTCCAGGACCACCTGGA
CCAGGAATGGACAGCGTAAGTGGCTATAATGTTCATGGACTGGCCAACAGCTATTCATCT
GGAAACAAGGGACCAAGTGGAGTCATCGCAGGCCAGCCTGGCGCTATGGGACCTAGAGGA
CAACCAGGTGTTTCTGGATCACCCGGACCGCAAGGATTTCAAGGACCACCTGGCGAACCC
GGCGAAGCTGGACCCAGTGGACCACCCGGACACATGGGGCCAGCAGGCATCCCAGGAAAG
GACGGAAAAGACGGCAAAGATGGGCGCCCCGGAAAAACAGGACCTATCGGTTCTCATGGC
CCACAGGGGCCAAGAGGATTTGCCGGCACCCCTGGTCTTCCTGGTGCCAAGGGCCACAAA
GGTCACGCTGGTCTTAATGGCTTGAAGGGAGAGAGCGGTTTACCTGGAGCTGATGGCGAA
TCAGGAGCTGTAGGAGAAGCTGGACCCCCAGGAATTACCGGGCCACGAGGTTTGCCCGGC
GACCGTGGTCGCTCTGGACCTGCTGGCGAACCTGGTGCAAGAGGTTCCGATGGTCTACCT
GGACAATCTGGCCCACCGGGACCAACTGGTAACTCTGGACCACCAGGCTTCCCAGGTTCA
CCAGGATCTAAGGGTGAAGGAGGACCGACCGGTGCCAGAGGACCCGAGGGACCACAGGGT
TCCAGAGGCGAAGCCGGCACACCTGGCTCATCTGGCCCTGCTGGATTACCTGGCTCACCT
GGTATAGATGGTGCATCTGGTGCCAAGGGTTCAACTGGAGCCTCCGGTATTGCTGGACTT
CCAGGTATTCCAGGCCCAAGAGGATCACCTGGCCCGCAAGGAAACATTGGTTCTTCTGGA
CCCAAAGGAAACACTGGAAACCCTGGAGTACAAGGTTTCAGAGGTGACCAGGGACCAAAA
GGAAGCCAGGGAAGCACTGGACCACAGGGTCTCCAAGGTGTCCAAGGAGAAGAGGGCAAA
AGGGGAAGCCGTGGCGAGTCTGGACCCCCAGGGCAAATGGGATCTCAGGGAGAGAGGGGT
CAACCCGGAAACCGTGGATTCCCGGGGCAAGACGGGAGCTCAGGTCCCAAGGGAGCTAGT
GGTCGTAGGGGAAAACCCGGCCTCAGTGGCCCCAAGGGTTCGGTTGGAGATGTGGGAAGA
TCGGGTGAACCTGGCCTACCTGGACCAAGGGGTCTCACGGGAAAACCAGGTTCGGATGGT
CGACAAGGCAAGCAAGGTCCATCAGGTCCTGCTGGCGAAGATGGACGACCAGGACCATCC
GGCGCAACTGGGCAAAAGGGTCCACCTGGCCAGATTGGTTTCCCTGGATCAAAGGGAGTT
GGTGGTGAACCAGGTAAATCAGGAGAGAAAGGTATTGCTGGACCACCTGGATCACGTGGT
CTCGCCGGTAAAGACGGTGAAATTGGACCAGCGGGACAACCAGGACCTTCTGGAGTTGCA
GGAGACAGAGGAGAGGCTGGTCAACCAGGTCCGCCCGGATTCCAAGGTCTTCCAGGTCCT
CCAGGACCCAACGGAGAGCCAGGAAAGGCTGGGGAAACTGGTGTGCCTGGAGAAGTTGGT
CCGTCTGGTGAGGCCGGACCAAGAGGTGAACGGGGATTCCCCGGTGAGGCTGGTTCAACT
GGACCCCAAGGTCTCACTGGGCCACGCGGCGCTGCCGGCATCCCTGGATCCGATGGACAG
AAGGGCCAAGTCGGTCCTCTCGGGCCACCTGGCGAAGCAGGCCCACAAGGCGTCCAAGGT
ACAACTGGTCGACGTGGACCCGCTGGGTTATCTGGATCGAAGGGCGAACGAGGTGATTCT
GGACCACCTGGTTTGGAGGGTGAACCTGGAAAAGAGGGTCTTAGGGGCTTAACTGGACCT
CTTGGGCCACCTGGAGCGCAAGGACCTAATGGAGAGAAGGGAGACGGCGGCAACGTTGGA
CCCGAAGGTGCTACTGGACCCAGAGGATCACCTGGTGAGAGAGGGGAACCAGGACCTGAT
GGACCACCAGGATACCCAGGATCTCCGGGTTCCGAGGGTCAACCTGGAAAGAAGGGCGAC
TCCGGCTCACGAGGTGTCAAGGGAGACTCCGGTGCACCTGGGCTACAAGGACCTGCCGGA
GGTGCCGGACCACTTGGTCCTCCTGGTGTCGCTGGGCGCAGAGGAGCTCGAGGGGCACTT
GGTGCACCGGGACCTGCAGGATTCCCAGGACCAGCTGGACGACCTGGCGCTCCAGGAGAT
CAGGGAGCTTCAGGACAGCAAGGTAACCCAGGAGAACCAGGAAAACCAGGATCCAAAGGA
GCAAGTGGTGATGAAGGACCACCTGGACCACAAGGAGCATTCGGTCTACAAGGATTGCCC
GGTCAGCCTGGCGAGCCCGGACCTAGCGGTGAACCTGGTGCACCGGGAGGCCCTGGTGCT
TCTGGACTCAGAGGAAACCCTGGATCATCTGGAAACCCTGGTCTACCTGGACCGTCTGGA
TCACCTGGTGAGAGAGGACCAGCTGGATTGCAGGGTGAAGAGGGCAAACAAGGTCGATCA
GGTCTTCCCGGCGATCGTGGTCCTCCAGGCGACATCGGCCCTGTAGGACCTGCTGGCCCA
TCTGGCGATTCTGGACCCGAGGGCATGCCTGGACCTGAAGGCGCACCTGGCCGCGACGGA
TCCACTGGAGTTAAGGGTGAAATTGGTGAAAGAGGCCACACTGGGCCACCCGGACAAGCG
GGCATGCCTGGCCCACCTGGCCTACATGGCATTGAAGGAAAGAGTGGCCCACGCGGCGAA
CCAGGTCCATCAGGTTCGCAAGGCGCACCAGGCCCTGAAGGTGGTCGAGGCGTACCTGGT
CCACAAGGTAGTCGAGGTGACACTGGTAAAACTGGAGATGCTGGACCAAGGGGTAGCAAG
GGACACCGTGGTTACAGCGGTCTACAAGGTCTCCCAGGGAAAACGGCAATTCAAGGTGAT
GCAGGGCAACCTGGTGCAGCTGGTCCACAAGGTCTTCGAGGAGCAACAGGACTCCGAGGT
CCAGCCGGCAATGACGGCTCACCTGGCTCACCTGGCCCCATTGGGCCCACAGGTCCACGT
GGTCAATCTGGTGAAGATGGTATGCGGGGACCCACTGGGCGCGAGGGACCACCTGGTCCA
CCAGGGCCTCCAGGGCCTGGCATAGACATGGCAGCCTTCCGATTCCCAGCTGTGAGTTCA
TTCAAGGGACCAAATGTGGCAGCTGACCAGCCAGTGACCAGTGATGTTGGACGTGATCCA
GAGATGATGTTGGTCTTGAAAGAGCTGACCAGCTCAGTGGAAGACATCAAAGCCCCACGT
GGTGTGAGCCGCAAGACGCCAGCTCGGTCGTGCTTGGACATCTATTTGGCTGAACAACAG
CAGGGAACTGTACCCAAGAGCGGTGTCCGATGGATCGATCCGAACGGCGGCTGCAACGCT
GACGGACTCGAGGTTTACTGCAACTTCCACACAATGGAGACTTGCGTCTACCCGACCAAC
CGCAACATAGAGAACGGCACCCACTACACCGGCGAGCCTGGACATACCTACTACGGCGAA
GAGATGACCGACGGTTCAACGGTGTCATACGATCCTCCTGCGGCAAGCAGAGTTGAGCAC
GCAGACTACGCCTCGCAGCTCACGTTCCTGCGGTTGCTCAGTAGCAAGGCCAAGCAGCAA
GTGACGTTCTTCTGCCGCAACATGGTGGCTTACTACGATGCTTCGGCCGACAACAAGGCG
CAAGCGCTGAAACTCCGTGGCTTCGGAGACGCCGAGTTCACCGCTGAGGGCGCTGTCGGC
ACCACCTACAGAGTGTTGCACGATGGATGCTCTACCCGGCCGACGCAATGGGACCGAACC
GAGATCGAGTTCGAGACCCGCCTGGTCGGAAGAATGCCGATCACGGACATCGCTCCGTTC
GACATCGGTGACGCGGATCAGCAGTTCGGCGCCAAGTTCGGCCCAGTCTGCTTCAAATAA
GTCTCAGGCGGCCGCAGCCCGGCACCTGAGCGCACCACCAGATAACGAACTGAATTTAAA
CGGACCCGACCCCGATTACCGCCCGCTCCCTAAACGGATTTGACGATTGGCAGGCGGGAG
CATCGCTCCTGCGAAAAAAAAACTTTTTTTCTGACGACGACGATGACGACGACTACTTTG
TTTTGTAACAATGTACTTTTTGTGTTTGTATAACGCATTCGTAGCACCCATAACGCCGCC
TTTATTCGTTTTTTTCTCCTGCGACCTAGTTAATTTAATTGTTTTCCTATACACCCAGCC
TACAAAATCAGCATCACGAACAAATTCCTCGCCCATCTTTTGTT
| ProSiteProfiles |
VWF_dom (IPR001007) - T[35-92] 11.281 |
| Pfam |
VWF_dom (IPR001007) - T[37-91] 2.1E-10 |
| SMART |
VWF_dom (IPR001007) - T[37-91] 4.3E-12 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[55-91] . |
| Pfam |
Collagen (IPR008160) - T[171-229] 8.7E-7 - T[1128-1186] 7.8E-8 |
| SMART |
Fib_collagen_C (IPR000885) - T[1219-1459] 4.8E-85 |
| Pfam |
Fib_collagen_C (IPR000885) - T[1219-1458] 1.9E-84 |
| ProSiteProfiles |
Fib_collagen_C (IPR000885) - T[1220-1459] 72.861 |
| ProDom |
Fib_collagen_C (IPR000885) - T[1347-1458] 7.0E-48 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 37.49 % | 440 | 2.9E-129 |
| CO1A2_HUMAN | 51.95 % | 702 | 0 |
| CO1A1_HUMAN | 54.666 % | 617 | 0 |