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  1. Transcript 'Cisavi.CG.ENS81.R130...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R130.3901-4710.04397.t

Possible name(s)

EXOSC4; EXOSC5; EXOSC6

Gene model

Cisavi.CG.ENS81.R130.3901-4710

Location

R130 [3,900 / 4,710]

Sequences

Amino acid sequence

Length: 270

>Cisavi.CG.ENS81.R130.3901-4710.04397.p
MPTDARRLAAPDSSQDPKLFGDIVKPQTLLDENEMRADGRYMTQPRNIFLQCGVVSQAKG
SAYCELSKTKVICSVYGPKDIEMREEFQINKGKLKCELKYAPFSSSKHREHIPDAEDVEN
SDILLQAISPAVCLQRYPKSQIEVHVLVLEDDGSVMPAAITSASLALVDAGIEMYDVVTA
SSVRVAGQEACFIDPISSEQFSRASLHKSNDINQGMVMVALLPSINQVSSILSVGHLESS
VLQEAITTCTFSAQNLHSVVRKSIISSFKK

Nucleotide sequence

Length: 810

>Cisavi.CG.ENS81.R130.3901-4710.04397.t
ATGCCAACCGATGCTCGGAGACTGGCAGCTCCGGATTCCAGTCAAGATCCAAAGTTGTTC
GGAGACATAGTAAAGCCACAAACATTATTGGACGAAAATGAGATGCGTGCGGATGGGAGG
TATATGACCCAACCACGCAATATCTTCCTTCAATGTGGAGTAGTGAGCCAAGCTAAAGGA
TCTGCGTACTGTGAACTGAGTAAAACCAAAGTGATCTGCTCGGTTTATGGACCCAAAGAC
ATTGAAATGAGGGAAGAATTTCAAATCAACAAAGGAAAGTTGAAATGTGAGTTAAAATAT
GCTCCATTTTCGAGCTCAAAGCACAGAGAGCATATCCCTGATGCTGAAGATGTGGAGAAT
TCTGATATTTTGCTCCAAGCGATCTCGCCGGCTGTGTGTCTCCAGCGATACCCGAAGTCG
CAGATCGAGGTCCATGTGTTGGTGCTGGAGGACGATGGGTCCGTGATGCCAGCTGCGATC
ACCTCCGCATCACTTGCTCTTGTGGATGCGGGGATCGAGATGTACGACGTCGTCACTGCT
TCCTCCGTCCGTGTCGCCGGGCAGGAGGCGTGTTTCATCGACCCGATATCAAGCGAACAA
TTTTCACGGGCATCGCTCCACAAGTCGAATGATATCAACCAGGGAATGGTGATGGTTGCG
CTGCTGCCTTCTATAAACCAGGTCTCATCCATTCTATCGGTCGGCCATCTTGAATCCAGT
GTCCTGCAAGAAGCGATCACAACTTGTACATTCTCGGCACAAAATCTACATTCGGTTGTT
AGAAAATCTATAATCAGTTCATTTAAGAAA

InterProScan

SUPERFAMILY
Ribosomal_S5_D2-typ_fold (IPR020568) - T[32-199] 3.29E-36
Pfam
ExoRNase_PH_dom1 (IPR001247) - T[46-173] 3.9E-36
SUPERFAMILY
ExoRNase_PH_dom2_sf (IPR036345) - T[174-269] 2.55E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS4_HUMAN 30.962 % 106 8.89E-28
EXOS6_HUMAN 35.357 % 126 6.72E-35