Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R130.37003-37917.04433.t

Possible name(s)

FOXA2; FOXB1; FOXB2

Gene model

Cisavi.CG.ENS81.R130.37003-37917

Location

R130 [37,002 / 37,917]

Sequences

Amino acid sequence

Length: 219

>Cisavi.CG.ENS81.R130.37003-37917.04433.p
MPRPGRDSYGEQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPFYRANTQRWQNS
LRHNLSFNDCFVKIPRRGDQPGKGSLWELHPTCGEMFENGSFLRRRKRFKTDFPQSGIQN
GVNPSMMSHYQHMKKPNLPSSPAVSLTPTLFRDFPHCEIPPNETRGGGSPSQPPLPSKLP
GFPEPGNDGGRATKTNHTSPPENSPKSKINFSIENIISG

Nucleotide sequence

Length: 657

>Cisavi.CG.ENS81.R130.37003-37917.04433.t
ATGCCGCGGCCAGGAAGAGACTCATACGGAGAGCAGAAACCTCCATATTCCTACATCGCT
CTCACAGCCATGGCAATCCAATCCTCCCCGAACAAAATGATGAGTCTCTCGGAGATATAC
CGCTACATCATGGACAGGTTCCCATTCTACCGCGCTAACACGCAGCGATGGCAGAACTCA
TTACGTCACAACCTCTCATTCAACGATTGTTTCGTGAAGATCCCGCGAAGAGGCGACCAG
CCGGGCAAGGGGAGTCTGTGGGAGCTTCATCCGACCTGCGGGGAAATGTTCGAGAACGGG
AGTTTCCTCCGACGACGCAAGAGATTCAAGACCGACTTTCCTCAATCTGGGATCCAAAAT
GGCGTCAACCCTTCTATGATGTCACACTACCAACATATGAAGAAACCGAATCTACCAAGC
TCACCAGCAGTTTCTCTCACACCAACCCTGTTTCGGGACTTTCCCCACTGCGAGATACCC
CCCAATGAAACCAGGGGTGGTGGGTCACCCAGTCAACCCCCACTTCCTTCCAAACTTCCC
GGTTTTCCAGAACCCGGAAACGACGGCGGCCGCGCGACGAAGACAAATCACACTTCACCC
CCGGAAAATTCGCCGAAATCGAAAATCAACTTCTCGATCGAGAATATCATCAGCGGG

InterProScan

Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[11-112] 1.8E-44
SMART	Fork_head_dom (IPR001766) - T[11-101] 6.6E-58
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[12-107] 4.99E-39
PRINTS	Fork_head_dom (IPR001766) - T[13-26] 3.4E-23 - T[34-51] 3.4E-23 - T[57-74] 3.4E-23
ProSiteProfiles	Fork_head_dom (IPR001766) - T[13-107] 38.7
ProSitePatterns	TF_fork_head_CS_1 (IPR018122) - T[13-26] .
CDD	Fork_head_dom (IPR001766) - T[13-90] 4.43985E-49
Pfam	Fork_head_dom (IPR001766) - T[13-97] 8.0E-36
ProSitePatterns	TF_fork_head_CS_2 (IPR030456) - T[57-63] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FOXA2_HUMAN	68.468 %	173	7.57E-52
FOXB1_HUMAN	82.883 %	210	9.74E-68
FOXB2_HUMAN	78.378 %	198	8.55E-62