- Transcript 'KH2012:KH.C5.25.v1.A...' >
- EST 'AV678166' >
- Transcript 'Cisavi.CG.ENS81.R130...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R130.24911-26271.04409.t
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
R130 [24,910 / 26,271]
Amino acid sequence
Length: 437
>Cisavi.CG.ENS81.R130.24911-26271.04409.p
MPRPGRDSYGEQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPFYRANTQRWQNS
LRHNLSFNDCFVKIPRRGDQPGKGLWGLHPTCGEMFENGSFLRRRKRFKTDFPQSGIQNG
VNPSMMSHYQHMSHNYGKEIGLNIIGETQIERNRIYQAHQQFLSHQPRFGTFPTPRYTPM
KPGVIGHPNPETTAAAVAYFRSAMTGFRNAMNKMAAGDVINPGSDVKYSMFNSVPGIPPF
TPHQPHPTDSKEIERSSSVSPSSDEENHTSPPENSPKSKINFSIENIISGRFSPKESKLR
EESDSPTSTQRSKKRSLNPVDPPNAKRSRNDFDRASTPRMLDAFPKVIPPKPLIHPWGFP
GTSTPKPTNPPPSTQPPPQFSLHTMAHSRPSDYTSFYKTGIPRQDSNESRYIPSPETDDV
TFSAFAKLKRFTELQVQ
Nucleotide sequence
Length: 1,314
>Cisavi.CG.ENS81.R130.24911-26271.04409.t
ATGCCGCGGCCAGGAAGAGACTCATACGGAGAGCAGAAACCTCCATATTCCTACATCGCT
CTCACAGCCATGGCAATCCAATCCTCCCCGAACAAAATGATGAGTCTCTCGGAGATATAC
CGCTACATCATGGACAGGTTCCCATTCTACCGCGCTAACACGCAGCGATGGCAGAACTCA
TTACGTCACAACCTCTCATTCAACGATTGTTTCGTGAAGATCCCGCGAAGAGGCGACCAG
CCGGGCAAGGGGCTGTGGGGGCTTCATCCGACCTGCGGGGAAATGTTCGAGAACGGGAGT
TTCCTCCGACGACGCAAGAGATTCAAGACCGACTTCCCTCAATCTGGGATCCAAAATGGC
GTCAACCCTTCTATGATGTCACACTACCAACATATGAGTCATAATTATGGGAAGGAGATT
GGACTTAACATCATCGGCGAAACACAAATTGAGAGAAACCGAATCTACCAAGCGCACCAG
CAGTTTCTCTCACACCAACCCCGTTTCGGTACTTTCCCCACTCCGAGATACACCCCAATG
AAACCAGGGGTAATAGGTCACCCAAACCCGGAAACGACGGCGGCCGCGGTCGCGTACTTC
CGGTCTGCAATGACTGGTTTCCGGAACGCGATGAACAAAATGGCGGCTGGTGACGTCATA
AACCCTGGAAGTGACGTCAAATATTCGATGTTTAACTCGGTTCCCGGGATTCCCCCGTTC
ACCCCACACCAACCCCACCCAACCGACTCGAAGGAAATCGAGAGATCCTCCTCCGTGTCG
CCATCTAGCGACGAAGAAAATCACACTTCACCCCCGGAAAATTCGCCGAAATCGAAAATC
AACTTCTCGATCGAGAATATCATCAGCGGGAGATTTTCCCCGAAGGAATCGAAGCTTCGA
GAAGAATCCGACTCCCCGACATCCACCCAGCGAAGTAAGAAACGAAGTTTGAACCCAGTT
GACCCCCCGAACGCAAAGCGATCGCGAAACGACTTCGACCGCGCATCCACCCCACGAATG
CTCGATGCCTTCCCGAAGGTGATTCCCCCAAAACCCCTGATTCACCCATGGGGATTCCCC
GGAACCTCCACCCCCAAACCCACCAACCCCCCACCATCCACCCAACCCCCTCCCCAGTTT
TCCCTCCACACGATGGCGCACTCCCGACCCTCAGATTACACGTCATTCTACAAAACGGGG
ATTCCCCGCCAGGATTCCAACGAATCCAGGTACATCCCCAGTCCTGAGACCGATGACGTA
ACATTCTCAGCATTCGCGAAATTAAAGCGCTTCACAGAGCTGCAGGTCCAATGA
| SMART |
Fork_head_dom (IPR001766) - T[11-100] 2.5E-53 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-111] 8.8E-41 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-106] 2.4E-35 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[13-26] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[13-26] 1.8E-22 - T[34-51] 1.8E-22 - T[57-74] 1.8E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[13-96] 1.4E-32 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[13-106] 35.712 |
| CDD |
Fork_head_dom (IPR001766) - T[13-89] 1.42684E-44 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[57-63] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 67.568 % | 168 | 2.87E-47 |
| FOXB1_HUMAN | 81.982 % | 207 | 2.42E-63 |
| FOXB2_HUMAN | 77.477 % | 194 | 3.31E-57 |