- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L10.29.v1....' >
- Clone 'cima878810' >
- Transcript 'Cisavi.CG.ENS81.R12....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R12.904283-919659.03413.t
Possible name(s)
GAA; MGAM
Gene model
Location
R12 [906,140 / 918,788]
Amino acid sequence
Length: 806
>Cisavi.CG.ENS81.R12.904283-919659.03413.p
SSKVDCYPEPGSSESGCYSRGCLWCPSNNPGDPWCIIPDGGKSFLLFVMTFQANGYRITL
AKIHTTTLFGDDVDTVTLDVSFDTEARLHIKFYDAANERFEVPLPINGADATAPADPLYD
IQFFNDPSFYFQVIKKSTGTVLLDTSLGGLTFSDQFLQIATRLPSTTLHFFLKISHFPSY
QHNFDWESFGMWARDQPPDPGANLYGTHPFYISMEDDGNSHGVLFLNSNAQDVTTTPAPG
LVYRTIGGVLDMYVFLGPEPNRVVEQYNTAIGTPFLPPYWSLGFQLCRYGYGDLNTVKET
VARMDAYDIPLDVQYGDIDYMDEQRDFTYDTSNYAGLRDYVRELQAGGKHYVIILGELHL
SHWDMTDPCITQDDPPGTYPAYDDGASMNVFVTTSDGFTPASGKVWPPGKCAFPDYTNPD
TETWWTDQCMDFHKTINFDGLWIDMNEPANFVTGSTEGCASNNLNNPPYMPKIWGNVLAE
KTMCPDHRHKLGNHYDVHNLYGWSQSNVTIKSAVASTGKRPFVISRSTFVGSGQWAAHWL
GDNNADWHDLRMSIIGMLEFNMFGIPYVGADICGFNGSPSEELCERWMELGAFYPFSRNH
NGLGYKEQDPAAWGDEFAARSRAVLRTRYTLLPYLYELFYHAHTDGTGIVRPLSFEFAND
KTTATIDEQFMWGAGLLLSPALYEGIKTVSAYFPDARCFSLRMGKIGGASFSLRMGKLVG
LVGARGTTASVDAPLGTIPIHVRGGHIIPTQEPASNTEISRHNPFGLIIALDDTGSAAGD
MYWDDGDTLNPIESGQFAHFTFNVQN
Nucleotide sequence
Length: 2,418
>Cisavi.CG.ENS81.R12.904283-919659.03413.t
AGCAGCAAGGTTGACTGCTACCCTGAACCCGGCTCCAGCGAGTCCGGCTGCTACTCCAGA
GGCTGTTTGTGGTGTCCGTCCAATAACCCTGGGGATCCTTGGTGCATAATTCCTGATGGT
GGTAAGTCGTTTCTGTTATTTGTCATGACATTTCAAGCCAACGGATACAGAATAACACTT
GCAAAGATCCATACAACCACATTGTTTGGAGATGACGTGGACACAGTGACACTTGATGTA
TCGTTTGATACTGAAGCAAGACTTCACATTAAGTTTTACGATGCCGCGAACGAGCGATTT
GAAGTACCACTGCCTATTAATGGGGCAGATGCGACGGCACCAGCAGATCCACTTTACGAC
ATCCAATTCTTCAATGACCCATCATTCTACTTCCAAGTGATCAAAAAGTCTACCGGCACC
GTATTGCTTGATACTTCCCTGGGAGGCTTAACATTCAGCGACCAATTCCTGCAAATAGCA
ACTCGTCTCCCCAGCACTACACTTCATTTTTTTTTAAAAATCTCACATTTTCCCTCATAC
CAGCATAACTTTGATTGGGAAAGCTTTGGAATGTGGGCCCGAGATCAGCCGCCAGATCCT
GGTGCAAATTTGTATGGAACCCATCCATTCTACATCTCAATGGAAGATGATGGCAACTCC
CATGGCGTGCTTTTCCTCAACTCAAATGCCCAAGATGTGACCACGACGCCTGCACCTGGC
TTAGTGTATCGTACCATTGGTGGCGTGCTTGACATGTACGTCTTCCTGGGTCCTGAACCC
AATCGAGTGGTCGAGCAATACAACACAGCCATCGGCACTCCCTTCCTACCACCCTACTGG
TCCCTTGGTTTCCAGTTGTGCAGATATGGCTACGGCGACTTAAACACAGTGAAAGAAACA
GTCGCCAGAATGGATGCTTATGATATACCTCTGGATGTCCAATATGGCGATATTGATTAC
ATGGATGAGCAAAGAGACTTCACATATGATACCAGCAACTACGCTGGCCTCCGAGATTAT
GTCCGGGAATTGCAGGCTGGCGGAAAGCACTATGTCATTATTTTGGGTGAGTTACATTTA
TCCCACTGGGACATGACAGACCCCTGCATCACCCAAGATGACCCTCCAGGCACATACCCA
GCTTACGATGATGGTGCCTCAATGAATGTGTTCGTCACAACATCTGACGGCTTCACACCA
GCCTCAGGGAAAGTGTGGCCACCTGGTAAATGTGCATTCCCTGATTACACGAACCCAGAT
ACTGAGACCTGGTGGACCGATCAATGCATGGACTTCCACAAAACCATCAACTTTGACGGC
CTCTGGATTGACATGAACGAACCGGCGAACTTTGTGACTGGCAGCACTGAAGGGTGTGCA
AGCAACAACTTAAACAACCCACCATACATGCCAAAGATATGGGGCAACGTGTTGGCAGAG
AAGACTATGTGCCCAGACCACCGACACAAACTTGGAAACCACTACGATGTCCATAACTTG
TATGGTTGGAGCCAATCTAATGTCACAATCAAATCTGCCGTCGCATCCACTGGAAAGCGA
CCGTTTGTGATCAGCAGAAGCACTTTTGTTGGGTCAGGACAGTGGGCTGCTCACTGGCTG
GGAGATAACAATGCAGACTGGCACGATCTCAGGATGTCCATTATTGGAATGCTGGAATTC
AACATGTTTGGTATTCCATATGTTGGAGCTGACATCTGTGGATTCAACGGTTCCCCAAGC
GAGGAATTGTGCGAACGATGGATGGAACTTGGGGCTTTCTACCCGTTCTCTAGAAATCAT
AACGGCCTTGGGTACAAAGAGCAGGACCCGGCTGCTTGGGGTGACGAATTTGCTGCTCGA
TCGAGAGCCGTTCTAAGGACGAGATATACTCTCTTGCCGTACCTATACGAACTCTTCTAC
CATGCCCATACAGATGGTACTGGTATCGTGCGTCCGTTATCCTTCGAGTTTGCCAACGAT
AAAACAACCGCAACTATCGACGAGCAGTTTATGTGGGGGGCTGGTCTGCTACTATCACCC
GCACTGTATGAAGGAATTAAGACCGTCTCTGCTTACTTCCCAGATGCAAGATGTTTTTCC
CTGAGAATGGGAAAAATTGGTGGGGCTAGTTTTTCTCTGAGAATGGGAAAATTAGTGGGG
CTAGTTGGTGCAAGAGGCACCACGGCTTCTGTTGACGCACCACTGGGCACCATTCCTATC
CACGTGAGAGGTGGCCACATCATACCGACCCAAGAACCTGCATCAAACACGGAGATTTCT
CGGCACAATCCATTCGGGCTGATCATTGCTTTGGACGACACTGGCTCTGCCGCTGGAGAC
ATGTACTGGGATGATGGAGACACACTGAACCCAATTGAAAGTGGCCAATTCGCACACTTT
ACATTTAATGTACAAAAT
| CDD |
P_trefoil_dom (IPR000519) - T[1-35] 2.02801E-6 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[1-39] 11.959 |
| Pfam |
P_trefoil_dom (IPR000519) - T[2-35] 7.0E-7 |
| Pfam |
Gal_mutarotase_N (IPR031727) - T[56-164] 4.4E-30 |
| SUPERFAMILY |
Gal_mutarotase_sf_dom (IPR011013) - T[64-260] 1.16E-27 |
| Pfam |
Glyco_hydro_31 (IPR000322) - T[253-748] 6.8E-144 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[263-448] 1.52E-72 - T[483-647] 1.52E-72 |
| ProSitePatterns |
Glyco_hydro_31_AS (IPR030458) - T[440-447] . |
| ProSitePatterns |
Glyco_hydro_31_CS (IPR030459) - T[569-599] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[632-744] 4.7E-27 - T[745-806] 1.1E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MGA_HUMAN | 44.499 % | 703 | 0 |
| MGAL_HUMAN | 43.896 % | 674 | 0 |
| LYAG_HUMAN | 42.383 % | 692 | 0 |