- Clone 'cien47942' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C13.24.v1....' >
- Transcript 'Cisavi.CG.ENS81.R12....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R12.904283-919659.03411.t
Possible name(s)
GAA; MGAM
Gene model
Location
R12 [904,326 / 918,788]
Amino acid sequence
Length: 843
>Cisavi.CG.ENS81.R12.904283-919659.03411.p
SSKVDCYPEPGSSESGCYSRGCLWCPSNNPGDPWCIIPDGGKSFLRKYLNTSPNTNGYRI
TLAKIHTTTLFGDDVDTVTLDVSFDTEARLHIKFYDAANERFEVPLPINGADATAPADPL
YDIQFFNDPSFYFQVIKKSTGTVLLDTSLGGLTFSDQFLQIATRLPSTTLHFFLKISHFP
SYQHNFDWESFGMWARDQPPDPGANLYGTHPFYISMEDDGNSHGVLFLNSNAQDVTTTPA
PGLVYRTIGGVLDMYVFLGPEPNRVVEQYNTAIGTPFLPPYWSLGFQLCRYGYGDLNTVK
ETVARMDAYDIPLDVQYGDIDYMDEQRDFTYDTSNYAGLRDYVRELQAGGKHYVIILGEL
HLSHWDMTDPCITQDDPPGTYPAYDDGASMNVFVTTSDGFTPASGKVWPPGKCAFPDYTN
PDTETWWTDQCMDFHKTINFDGLWIDMNEPANFVTGSTEGCASNNLNNPPYMPKIWGNVL
AEKTMCPDHRHKLGNHYDVHNLYGWSQSNVTIKSAVASTGKRPFVISRSTFVGSGQWAAH
WLGDNNADWHDLRMSIIGMLEFNMFGIPYVGADICGFNGSPSEELCERWMELGAFYPFSR
NHNGLGYKEQDPAAWGDEFAARSRAVLRTRYTLLPYLYELFYHAHTDGTGIVRPLSFEFA
NDKTTATIDEQFMWGAGLLLSPALYEGIKTVSAYFPDARCFSLRMGKIGGASFSLRMGKL
VGARGTTASVDAPLGTIPIHVRGGHIIPTQEPASNTEISRHNPFGLIIALDDTGSAAGDM
YWDDGDTLNPIESGQFAHFTFNVQNNQLSTTAEGSTSIMLGMVMGSLRIMGVSSPPQSVL
VNG
Nucleotide sequence
Length: 2,609
>Cisavi.CG.ENS81.R12.904283-919659.03411.t
AGCAGCAAGGTTGACTGCTACCCTGAACCCGGCTCCAGCGAGTCCGGCTGCTACTCCAGA
GGCTGTTTGTGGTGTCCGTCCAATAACCCTGGGGATCCTTGGTGCATAATTCCTGATGGT
GGTAAGTCGTTTCTTCGTAAATACCTAAACACTAGTCCCAACACCAACGGATACAGAATA
ACACTTGCAAAGATCCATACAACCACATTGTTTGGAGATGACGTGGACACAGTGACACTT
GATGTATCGTTTGATACTGAAGCAAGACTTCACATTAAGTTTTACGATGCCGCGAACGAG
CGATTTGAAGTACCACTGCCTATTAATGGGGCAGATGCGACGGCACCAGCAGATCCACTT
TACGACATCCAATTCTTCAATGACCCATCATTCTACTTCCAAGTGATCAAAAAGTCTACC
GGCACCGTATTGCTTGATACTTCCCTGGGAGGCTTAACATTCAGCGACCAATTCCTGCAA
ATAGCAACTCGTCTCCCCAGCACTACACTTCATTTTTTTTTAAAAATCTCACATTTTCCC
TCATACCAGCATAACTTTGATTGGGAAAGCTTTGGAATGTGGGCCCGAGATCAGCCGCCA
GATCCTGGTGCAAATTTGTATGGAACCCATCCATTCTACATCTCAATGGAAGATGATGGC
AACTCCCATGGCGTGCTTTTCCTCAACTCAAATGCCCAAGATGTGACCACGACGCCTGCA
CCTGGCTTAGTGTATCGTACCATTGGTGGCGTGCTTGACATGTACGTCTTCCTGGGTCCT
GAACCCAATCGAGTGGTCGAGCAATACAACACAGCCATCGGCACTCCCTTCCTACCACCC
TACTGGTCCCTTGGTTTCCAGTTGTGCAGATATGGCTACGGCGACTTAAACACAGTGAAA
GAAACAGTCGCCAGAATGGATGCTTATGATATACCTCTGGATGTCCAATATGGCGATATT
GATTACATGGATGAGCAAAGAGACTTCACATATGATACCAGCAACTACGCTGGCCTCCGA
GATTATGTCCGGGAATTGCAGGCTGGCGGAAAGCACTATGTCATTATTTTGGGTGAGTTA
CATTTATCCCACTGGGACATGACAGACCCCTGCATCACCCAAGATGACCCTCCAGGCACA
TACCCAGCTTACGATGATGGTGCCTCAATGAATGTGTTCGTCACAACATCTGACGGCTTC
ACACCAGCCTCAGGGAAAGTGTGGCCACCTGGTAAATGTGCATTCCCTGATTACACGAAC
CCAGATACTGAGACCTGGTGGACCGATCAATGCATGGACTTCCACAAAACCATCAACTTT
GACGGCCTCTGGATTGACATGAACGAACCGGCGAACTTTGTGACTGGCAGCACTGAAGGG
TGTGCAAGCAACAACTTAAACAACCCACCATACATGCCAAAGATATGGGGCAACGTGTTG
GCAGAGAAGACTATGTGCCCAGACCACCGACACAAACTTGGAAACCACTACGATGTCCAT
AACTTGTATGGTTGGAGCCAATCTAATGTCACAATCAAATCTGCCGTCGCATCCACTGGA
AAGCGACCGTTTGTGATCAGCAGAAGCACTTTTGTTGGGTCAGGACAGTGGGCTGCTCAC
TGGCTGGGAGATAACAATGCAGACTGGCACGATCTCAGGATGTCCATTATTGGAATGCTG
GAATTCAACATGTTTGGTATTCCATATGTTGGAGCTGACATCTGTGGATTCAACGGTTCC
CCAAGCGAGGAATTGTGCGAACGATGGATGGAACTTGGGGCTTTCTACCCGTTCTCTAGA
AATCATAACGGCCTTGGGTACAAAGAGCAGGACCCGGCTGCTTGGGGTGACGAATTTGCT
GCTCGATCGAGAGCCGTTCTAAGGACGAGATATACTCTCTTGCCGTACCTATACGAACTC
TTCTACCATGCCCATACAGATGGTACTGGTATCGTGCGTCCGTTATCCTTCGAGTTTGCC
AACGATAAAACAACCGCAACTATCGACGAGCAGTTTATGTGGGGGGCTGGTCTGCTACTA
TCACCCGCACTGTATGAAGGAATTAAGACCGTCTCTGCTTACTTCCCAGATGCAAGATGT
TTTTCCCTGAGAATGGGAAAAATTGGTGGGGCTAGTTTTTCTCTGAGAATGGGAAAATTA
GTTGGTGCAAGAGGCACCACGGCTTCTGTTGACGCACCACTGGGCACCATTCCTATCCAC
GTGAGAGGTGGCCACATCATACCGACCCAAGAACCTGCATCAAACACGGAGATTTCTCGG
CACAATCCATTCGGGCTGATCATTGCTTTGGACGACACTGGCTCTGCCGCTGGAGACATG
TACTGGGATGATGGAGACACACTGAACCCAATTGAAAGTGGCCAATTCGCACACTTTACA
TTTAATGTACAAAATAACCAACTGTCGACCACAGCAGAAGGTAGCACGAGTATAATGTTG
GGGATGGTGATGGGATCTCTTCGTATCATGGGCGTGTCATCTCCACCACAGTCTGTTCTG
GTTAACGGGGCAGCCAAGTCCTTCTCTGTGTCTAATTCGGAGGTAACAGTCACGAACATC
AATGTTGTTATGGGAGCTTCGTTTTCTGT
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[1-39] 11.959 |
| CDD |
P_trefoil_dom (IPR000519) - T[1-35] 1.74299E-6 |
| Pfam |
P_trefoil_dom (IPR000519) - T[2-35] 7.4E-7 |
| SUPERFAMILY |
Gal_mutarotase_sf_dom (IPR011013) - T[45-262] 8.16E-28 |
| Pfam |
Gal_mutarotase_N (IPR031727) - T[58-166] 4.7E-30 |
| Pfam |
Glyco_hydro_31 (IPR000322) - T[255-747] 3.4E-144 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[265-450] 1.74E-72 - T[485-649] 1.74E-72 |
| ProSitePatterns |
Glyco_hydro_31_AS (IPR030458) - T[442-449] . |
| ProSitePatterns |
Glyco_hydro_31_CS (IPR030459) - T[571-601] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[634-743] 2.2E-27 - T[744-843] 2.5E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MGA_HUMAN | 44.009 % | 714 | 0 |
| MGAL_HUMAN | 42.706 % | 684 | 0 |
| LYAG_HUMAN | 42.037 % | 712 | 0 |