- Molecular Tool 'cicl11a10-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C10.195.v2...' >
- Transcript 'KH2012:KH.C10.195.v2...' >
- Transcript 'Cisavi.CG.ENS81.R12....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R12.904283-919659.03410.t
Possible name(s)
GAA; MGAM
Gene model
Location
R12 [904,316 / 919,659]
Amino acid sequence
Length: 736
>Cisavi.CG.ENS81.R12.904283-919659.03410.p
NKNSSIQNLFFPYSLTRQFCLFSSKVDCYPEPGSSESGCYSRGCLWCPSNNPGDPWCIIP
DGANGYRITLAKIHTTTLFGDDVDTVTLDVSFDTEARLHIKFYDAANERFEVPLPINGAD
ATAPADPLYDIQFFNDPSFYFQVIKKSTGTVLLDTSLGGLTFSDQFLQIATRLPSTTLYG
FGENEHQNLIIHNFDWESFGMWARDQPPDPGANLYGTHPFYISMEDDGNSHGVLFLNSNA
QDVTTTPAPGLVYRTIGGVLDMYVFLGPEPNRVVEQYNTAIGTPFLPPYWSLGFQLCRYG
YGDLNTVKETVARMDAYDIPLDVQYGDIDYMDEQRDFTYDTSNYAGLRDYVRELQAGGKH
YVIILVQIHDIFLCTIKFKKNPKLIFHFNTIDISHRKQVTWMVPRLKSASCMLCVFSYLI
QDIKRTLFEHNSSEIWGNVLAEKTMCPDHRHKLGNHYDVHNLYGWSQSNVTIKSAVASTG
KRPFVISRSTFVGSGQWAAHWLGDNNADWHDLRMSIIGMLEFNMFGIPYVGADICGFNGS
PSEELCERWMELGAFYPFSRNHNGLGYKEQDPAAWGDEFAARSRAVLRTRYTLLPYLYEL
FYHAHTDGTGIVRPLSFEFANDKTTATIDEQFMWGAGLLLSPALYEGIKTVSAYFPDARW
FNYYDGVEVGARGTTASVDAPLGTIPIHVRGGHIIPTQEPASNTEISRHNPFGLIIALDD
TGSAAGDMYWDDGDTL
Nucleotide sequence
Length: 2,463
>Cisavi.CG.ENS81.R12.904283-919659.03410.t
AATAAAAATTCGAGCATTCAAAACTTGTTTTTCCCGTATTCCCTTACTAGACAGTTCTGT
TTATTCTCCAGCAAGGTTGACTGCTACCCTGAACCCGGCTCCAGCGAGTCCGGCTGCTAC
TCCAGAGGCTGTTTGTGGTGTCCGTCCAATAACCCTGGGGATCCTTGGTGCATAATTCCT
GATGGTGCCAACGGATACAGAATAACACTTGCAAAGATCCATACAACCACATTGTTTGGA
GATGACGTGGACACAGTGACACTTGATGTATCGTTTGATACTGAAGCAAGACTTCACATT
AAGTTTTACGATGCCGCGAACGAGCGATTTGAAGTACCACTGCCTATTAATGGGGCAGAT
GCGACGGCACCAGCAGATCCACTTTACGACATCCAATTCTTCAATGACCCATCATTCTAC
TTCCAAGTGATCAAAAAGTCTACCGGCACCGTATTGCTTGATACTTCCCTGGGAGGCTTA
ACATTCAGCGACCAATTCCTGCAAATAGCAACTCGTCTCCCCAGCACTACACTGTATGGA
TTCGGGGAGAATGAGCACCAGAACCTCATCATCCATAACTTTGATTGGGAAAGCTTTGGA
ATGTGGGCCCGAGATCAGCCGCCAGATCCTGGTGCAAATTTGTATGGAACCCATCCATTC
TACATCTCAATGGAAGATGATGGCAACTCCCATGGCGTGCTTTTCCTCAACTCAAATGCC
CAAGATGTGACCACGACGCCTGCACCTGGCTTAGTGTATCGTACCATTGGTGGCGTGCTT
GACATGTACGTCTTCCTGGGTCCTGAACCCAATCGAGTGGTCGAGCAATACAACACAGCC
ATCGGCACTCCCTTCCTACCACCCTACTGGTCCCTTGGTTTCCAGTTGTGCAGATATGGC
TACGGCGACTTAAACACAGTGAAAGAAACAGTCGCCAGAATGGATGCTTATGATATACCT
CTGGATGTCCAATATGGCGATATTGATTACATGGATGAGCAAAGAGACTTCACATATGAT
ACCAGCAACTACGCTGGCCTCCGAGATTATGTCCGGGAATTGCAGGCTGGCGGAAAGCAC
TATGTCATTATTTTGGTTCAAATACATGACATTTTTTTATGTACAATTAAATTCAAAAAG
AATCCAAAGTTAATATTCCACTTTAACACAATTGATATTTCTCATCGAAAACAGGTAACA
TGGATGGTACCGAGATTAAAATCAGCTTCTTGCATGTTGTGTGTCTTTTCTTACCTTATA
CAAGACATAAAAAGGACATTGTTTGAACATAATAGCTCTGAGATATGGGGCAACGTGTTG
GCAGAGAAGACTATGTGCCCAGACCACCGACACAAACTTGGAAACCACTACGATGTCCAT
AACTTGTATGGTTGGAGCCAATCTAATGTCACAATCAAATCTGCCGTCGCATCCACTGGA
AAGCGACCGTTTGTGATCAGCAGAAGCACTTTTGTTGGGTCAGGACAGTGGGCTGCTCAC
TGGCTGGGAGATAACAATGCAGACTGGCACGATCTCAGGATGTCCATTATTGGAATGCTG
GAATTCAACATGTTTGGTATTCCATATGTTGGAGCTGACATCTGTGGATTCAACGGTTCC
CCAAGCGAGGAATTGTGCGAACGATGGATGGAACTTGGGGCTTTCTACCCGTTCTCTAGA
AATCATAACGGCCTTGGGTACAAAGAGCAGGACCCGGCTGCTTGGGGTGACGAATTTGCT
GCTCGATCGAGAGCCGTTCTAAGGACGAGATATACTCTCTTGCCGTACCTATACGAACTC
TTCTACCATGCCCATACAGATGGTACTGGTATCGTGCGTCCGTTATCCTTCGAGTTTGCC
AACGATAAAACAACCGCAACTATCGACGAGCAGTTTATGTGGGGGGCTGGTCTGCTACTA
TCACCCGCACTGTATGAAGGAATTAAGACCGTCTCTGCTTACTTCCCAGATGCAAGATGG
TTTAATTACTACGATGGTGTTGAGGTTGGTGCAAGAGGCACCACGGCTTCTGTTGACGCA
CCACTGGGCACCATTCCTATCCACGTGAGAGGTGGCCACATCATACCGACCCAAGAACCT
GCATCAAACACGGAGATTTCTCGGCACAATCCATTCGGGCTGATCATTGCTTTGGACGAC
ACTGGCTCTGCCGCTGGAGACATGTACTGGGATGATGGAGACACACTGAACCCAATTGAA
AGTGGCCAATTCGCACACTTTACATTTAATGTACAAAATAACCAACTGTCGACCACAGCA
GAAGGTAGCACGAGTATAATGTTGGGGATGGTGATGGGATCTCTTCGTATCATGGGCGTG
TCATCTCCACCACAGTCTGTTCTGGTTAACGGGGCAGCCAAGTCCTTCTCTGTGTCTAAT
TCGGAGGTAACAGTCACGAACATCAATGTTGTTATGGGAGCTTCGTTTTCTGTGCAATGG
TGA
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[13-61] 9.791 |
| SMART |
P_trefoil_dom (IPR000519) - T[18-64] 0.0014 |
| CDD |
P_trefoil_dom (IPR000519) - T[23-57] 1.33909E-6 |
| Pfam |
P_trefoil_dom (IPR000519) - T[23-57] 1.7E-7 |
| Pfam |
Gal_mutarotase_N (IPR031727) - T[66-174] 3.8E-30 |
| SUPERFAMILY |
Gal_mutarotase_sf_dom (IPR011013) - T[74-270] 4.39E-35 |
| Pfam |
Glyco_hydro_31_N_dom (IPR025887) - T[177-239] 2.1E-7 |
| Pfam |
Glyco_hydro_31 (IPR000322) - T[263-695] 2.4E-124 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[273-609] 6.32E-57 |
| ProSitePatterns |
Glyco_hydro_31_CS (IPR030459) - T[531-561] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[593-691] 1.2E-33 - T[692-736] 6.8E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MGA_HUMAN | 53.974 % | 346 | 7.67E-103 |
| SUIS_HUMAN | 49.498 % | 320 | 7.53E-94 |
| MGAL_HUMAN | 53.311 % | 337 | 1.35E-99 |