- Transcript 'Cisavi.CG.ENS81.R125...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R125.93093-108455.01412.t
Possible name(s)
TBX1; TBX10; TBX20
Gene model
Location
R125 [93,092 / 107,910]
Amino acid sequence
Length: 376
>Cisavi.CG.ENS81.R125.93093-108455.01412.p
MKSLWEEFNDLGTEMIVTKAGRRMFPTFQVKVFGLDTSEYILMMDFVPVDDKRYRYAFHT
SSWSVAGKADASMPPRIHVHPDSPAKGGHWTKQIVSFDKLKLTNNLLDDNGHIILNSMHR
FQPRFHVVLVDNSHDSIQRADENFKTFVFDETKFTAVTAYQNHRITQLKIQSNPFAKGFR
DCDPEECSIDVLGNYPSPNGSRSRSHHRPSSLQLMGVAAKHRVMQMGEAAEKDNESRGCD
RSPDSDMRSSSTKYTHSISTNHQHLSYTGCNITDTSVMTPLHPTNEGPAHHFLTPPPIRT
DESATGLARLTSLESALLPTQAHQFHYPHTSPTLPFDDVRNSGYKYPQPPYGYGGYLSTT
HARPSPYPLTKPPYTP
Nucleotide sequence
Length: 1,163
>Cisavi.CG.ENS81.R125.93093-108455.01412.t
GAACGGCTCGTGGGAGTGGAAGCGAGATTGGAAATGAAATCGCTCTGGGAAGAATTCAAC
GACCTCGGCACGGAAATGATTGTAACCAAAGCTGGAAGACGCATGTTTCCAACGTTTCAA
GTAAAAGTGTTCGGCCTGGACACAAGCGAGTACATATTGATGATGGACTTTGTACCAGTG
GACGACAAAAGATACAGATATGCATTTCACACGTCAAGTTGGTCAGTTGCCGGCAAGGCC
GACGCGTCAATGCCTCCCCGCATTCACGTCCATCCAGATTCGCCCGCGAAGGGCGGCCAC
TGGACCAAACAAATCGTCTCATTCGATAAGCTGAAGCTCACCAATAATTTGCTCGATGAC
AACGGACATATCATCCTCAATTCAATGCACCGATTCCAGCCTCGATTCCACGTGGTTCTT
GTAGACAACAGCCACGACAGCATACAACGCGCGGATGAAAACTTTAAAACGTTCGTTTTT
GATGAAACCAAGTTCACAGCCGTTACCGCATACCAGAATCACCGTATAACGCAACTGAAA
ATTCAAAGCAATCCGTTTGCCAAAGGCTTCAGGGATTGTGACCCCGAAGAATGTTCGATC
GACGTCCTAGGGAATTACCCTTCACCCAATGGCTCCAGATCGCGATCCCATCATCGACCC
AGTTCTCTGCAGTTGATGGGGGTAGCCGCGAAACATCGGGTAATGCAAATGGGTGAAGCG
GCGGAAAAAGATAACGAAAGTAGAGGTTGTGATCGATCCCCCGATAGCGACATGCGGTCA
TCTTCTACCAAATACACTCATTCTATTTCGACCAACCACCAACACTTATCCTACACTGGC
TGCAACATCACTGATACGTCCGTGATGACCCCATTGCACCCGACCAATGAGGGCCCTGCT
CATCACTTTTTGACTCCGCCTCCGATTCGAACTGACGAATCAGCGACCGGTTTAGCGAGA
TTGACAAGTTTGGAGTCGGCTCTCCTACCCACGCAGGCGCACCAGTTTCACTACCCCCAT
ACGTCACCAACTCTACCGTTCGATGACGTTAGAAACTCTGGATATAAATACCCGCAACCA
CCATATGGATACGGGGGTTATTTATCTACGACGCACGCAAGACCGTCGCCATACCCCCTG
ACTAAACCACCATACACCCCCGC
| SMART |
TF_T-box (IPR001699) - T[1-186] 3.7E-107 |
| Gene3D |
T-box_sf (IPR036960) - T[1-181] 7.5E-88 |
| PANTHER |
TF_T-box (IPR001699) - T[1-284] 1.1E-123 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-181] 69.949 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[2-181] 3.23E-70 |
| CDD |
TF_T-box (IPR001699) - T[2-183] 4.04367E-110 |
| Pfam |
TF_T-box (IPR001699) - T[2-181] 6.7E-75 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[4-23] . |
| PRINTS |
TF_T-box (IPR001699) - T[12-36] 7.06E-43 - T[78-91] 7.06E-43 - T[95-104] 7.06E-43 - T[114-128] 7.06E-43 - T[152-165] 7.06E-43 - T[173-181] 7.06E-43 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX20_HUMAN | 59.391 % | 244 | 5.21E-77 |
| TBX1_HUMAN | 72.197 % | 333 | 1.64E-112 |
| TBX10_HUMAN | 67.411 % | 310 | 1.59E-103 |