- Transcript 'Cisavi.CG.ENS81.R1.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R1.2299685-2304494.17056.t
Possible name(s)
SNX13; SNX19; SNX25
Gene model
Location
R1 [2,299,684 / 2,304,494]
Amino acid sequence
Length: 448
>Cisavi.CG.ENS81.R1.2299685-2304494.17056.p
MQKDESFFPAFKASSFYMRLLAELDLLRESSLTSSDTNGSVSGSSLDEMATSENDEVNKL
SAVITQTGICKEHGKTYAMFAVTVTRHWGNERLETWDTFRRFREFYDLHLRLKEYGSNLG
NIRFPGKTFFKDLKEDFLDRRKAELNQYLNSVLSIDHPTKAMECLHTFLDAKAYQKNTRT
FASKMDMIMRESAQSVANFVSQAPDNFIGGIQRASDKVSDGIQKFSDKLPGSKLPEDHPI
EYSIENNIPLRILLLLMDEVFNLKQQNQWLRRQSVAALQQVVTAVFGDKWNRKIVGYVDN
AVSAPQVSEYIRKFQESFWPGGILAEATTPRDEATTMRTRVLAKTKLHGVIPDELRPVMG
NETSRHGMARLFELLQQKPLNTRFCYVLLEGFLYRVFPENRFQELFQKFHSASPKMRSHK
RALMTRGVDQWKHRTHDGKMRLMRSFES
Nucleotide sequence
Length: 1,807
>Cisavi.CG.ENS81.R1.2299685-2304494.17056.t
AGCTTTAAAAAAGAAACTCGATTGTGGAGAGCCATCTCCATATGTATTCGATGATATACA
ACAAAAGGTGTTCTTGACAATGCAAAAAGACGAGTCATTCTTCCCAGCTTTTAAAGCAAG
CTCCTTCTACATGAGGCTGCTGGCTGAGCTGGACCTTTTGCGTGAAAGCAGCCTCACGTC
CAGTGACACGAATGGATCAGTGTCTGGTTCGTCATTAGATGAAATGGCGACTTCTGAAAA
TGATGAAGTAAATAAACTATCTGCAGTTATAACACAAACTGGGATATGCAAGGAACACGG
CAAAACGTATGCCATGTTCGCCGTGACAGTGACTCGACATTGGGGGAATGAGAGACTGGA
GACGTGGGATACTTTTAGGAGGTTCAGGGAGTTCTACGATCTTCATCTTAGATTGAAAGA
ATATGGCTCCAACCTGGGCAACATCCGATTCCCTGGAAAAACCTTCTTTAAAGATTTAAA
GGAGGACTTCCTAGACCGGAGGAAAGCTGAGCTCAATCAATACCTCAACTCGGTGTTATC
AATTGATCACCCAACGAAGGCAATGGAGTGTCTGCACACTTTCCTTGATGCCAAGGCTTA
CCAGAAGAATACGCGAACATTTGCAAGCAAGATGGATATGATTATGCGGGAATCTGCTCA
GAGCGTCGCCAATTTTGTCAGCCAGGCTCCGGACAACTTCATCGGAGGAATCCAGCGCGC
ATCGGACAAGGTGTCCGACGGCATCCAGAAGTTCTCAGATAAACTTCCGGGCTCGAAACT
TCCCGAGGACCACCCCATCGAATACAGTATCGAAAACAACATTCCGCTTCGCATTCTTCT
CCTACTCATGGACGAAGTGTTCAACCTAAAGCAGCAGAACCAGTGGTTGAGGCGGCAGAG
TGTGGCCGCGCTGCAACAAGTCGTAACTGCTGTGTTTGGCGACAAATGGAACCGGAAAAT
AGTTGGTTACGTGGATAACGCCGTCTCTGCTCCACAGGTAAGCGAGTACATCCGCAAATT
CCAAGAATCCTTCTGGCCGGGTGGGATTCTTGCTGAGGCCACCACACCACGTGACGAAGC
AACGACCATGCGAACGAGAGTGCTCGCTAAAACCAAGCTGCACGGCGTGATCCCGGATGA
ACTTCGGCCAGTAATGGGAAACGAGACAAGCCGTCATGGAATGGCGCGCTTGTTTGAACT
TCTTCAACAAAAGCCGCTCAACACTCGATTCTGTTACGTCCTTCTGGAAGGTTTCTTATA
CCGGGTATTCCCCGAAAATAGGTTCCAAGAACTCTTCCAGAAATTCCACTCCGCATCACC
CAAAATGCGCTCACACAAGAGGGCGCTCATGACACGCGGCGTGGACCAGTGGAAACACCG
CACCCACGACGGGAAAATGCGCCTCATGCGATCGTTTGAGTCGTGACGTAAGCATTACGT
CAAAATGCAATGATTAAACAAATTTTTCGCTTTCATTTGCCTATAACGTCGTAATAGTAC
TACATTGTCGTCACCATCGCACATTGCAACCACAATACAACAAAAGTGATTAGCTGGAAG
TTTCACCCTCAAGAAACTACATTTTAGGTGCTATTGTGGCCAAAACAAGTTCTATTTCAA
TGACATCACACCGTTGATACTTTTTTGTATGGTTTCCGTGCAATTTGCTTTATCCTGTAC
ATCTGAGATTATCCATTCGCATACTGTGGCGATATTACCGATAGCACCATGTATATTGTC
TTCGTCCTTCGTGCAATCCGTCGAAACAAGTGGTTATCTTAATCGTACAAAGCGACAGTT
CTAAATC
| Gene3D |
PX_dom_sf (IPR036871) - T[53-184] 9.7E-23 |
| ProSiteProfiles |
Phox (IPR001683) - T[58-175] 13.547 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[60-172] 5.1E-19 |
| SMART |
Phox (IPR001683) - T[61-172] 2.3E-9 |
| Pfam |
Phox (IPR001683) - T[71-170] 1.4E-15 |
| Pfam |
Sorting_nexin_C (IPR013937) - T[269-378] 1.0E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX13_HUMAN | 40.598 % | 350 | 1.39E-111 |
| SNX25_HUMAN | 27.245 % | 124 | 1.58E-30 |
