Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R122.47647-52123.02033.t

Possible name(s)

CWF19L1; CWF19L2; DBR1

Gene model

Cisavi.CG.ENS81.R122.47647-52123

Location

R122 [47,646 / 52,123]

Sequences

Amino acid sequence

Length: 540

>Cisavi.CG.ENS81.R122.47647-52123.02033.p
MSALKILVCGDVRGKFDQVFGRVRKLQSKGNDFSMLLCVGDFFSDSVEAKSSWLEYLNGT
KKCPITTFILGPNNENVESYFADSADCGGELCENITYLGKKGIFTGTSGLKIAYLSGVES
NDPTNTSFNVDDIKVLSSQLGSDNADYKGIDILMTSSWPKGIHTYGNSPSNEKCKSCGSE
LLAQLAKTCKPRYHFAGMEGINYERLPYRNHTVLAEPSRHVTRFIALGHAANSEKQKYLY
AFLMTPMPQAEDLNTQPPDTTQSPYDVDKANKIPVLISNNSATADQYRWNMDMNRGQKRK
SQNNNHNQPERKHSRPQDWSCWFCLGGEKVEKHLVASVGDLCYVAMAKGGLSPDHVLILP
IAHHSSSNDLPEDTMLEVTRYKDALRSAFKHQERDCVFFERNYRTDHMQIQVVPLPKGVT
SDTVKKSFIELAATNADRHGNPSPLDFAQLPARTDLKQVLGKGIPFFHVELPDGTRLLHR
IQRFFPLQFGREALCSAPLLNAPNRVDWRSCDIPRDQESEHTKKFREFFKKFDVTMADDE

Nucleotide sequence

Length: 1,908

>Cisavi.CG.ENS81.R122.47647-52123.02033.t
CGCGAACGAGTTTTGAGTTTTGCTTAACATTTCTTTCGTAGTTTTAGTTTTTTTATTTTT
TAAAATGTCTGCGTTAAAAATACTTGTTTGTGGTGACGTCAGAGGAAAGTTTGACCAAGT
TTTCGGTCGAGTTCGGAAGCTGCAGAGCAAAGGAAATGATTTTAGTATGTTGCTTTGCGT
TGGAGATTTCTTCAGCGATTCAGTGGAAGCTAAATCCTCCTGGTTGGAATATCTAAACGG
CACAAAAAAATGTCCTATCACAACTTTTATTCTTGGACCTAACAATGAAAATGTCGAGTC
ATATTTTGCTGATTCAGCTGATTGTGGAGGAGAGTTGTGCGAAAACATCACTTATCTGGG
TAAGAAGGGAATTTTCACTGGAACTTCTGGATTGAAAATTGCTTATCTCAGTGGAGTTGA
ATCGAATGATCCAACAAACACTTCATTTAATGTGGATGATATCAAGGTCCTGTCAAGTCA
GCTAGGATCAGACAATGCCGATTACAAGGGTATAGATATTCTTATGACATCATCATGGCC
TAAGGGTATACACACCTATGGGAATTCCCCGTCCAATGAAAAATGCAAGTCATGTGGATC
AGAATTGCTGGCCCAATTGGCAAAGACCTGTAAACCAAGATATCACTTTGCTGGAATGGA
GGGAATTAACTACGAAAGACTACCATATAGAAATCATACTGTGCTTGCTGAACCATCACG
TCATGTGACACGGTTTATCGCACTTGGTCATGCAGCTAATTCGGAAAAACAAAAGTACTT
GTATGCGTTCTTAATGACCCCCATGCCTCAAGCCGAGGATTTGAACACGCAACCCCCTGA
CACAACCCAATCCCCCTATGATGTGGACAAAGCAAATAAAATCCCGGTTCTTATCTCAAA
TAACTCAGCCACCGCAGATCAATACAGATGGAACATGGATATGAATCGAGGACAGAAACG
GAAATCACAAAACAACAATCACAATCAGCCTGAACGCAAACATTCGAGGCCACAGGATTG
GTCTTGTTGGTTCTGTTTGGGTGGTGAGAAGGTGGAGAAGCATCTTGTTGCAAGTGTTGG
TGACTTGTGCTATGTTGCGATGGCGAAAGGAGGTTTGTCTCCCGATCATGTCCTGATCCT
CCCCATCGCTCATCACTCCTCATCTAACGACCTCCCGGAGGACACCATGCTTGAGGTAAC
CAGGTACAAAGATGCGCTCAGATCAGCATTCAAACATCAGGAGAGGGATTGTGTATTCTT
CGAGAGGAATTACAGGACCGACCATATGCAGATACAGGTAGTTCCCCTTCCGAAAGGCGT
GACCTCGGATACGGTGAAGAAATCGTTCATAGAATTAGCAGCAACGAACGCAGATCGCCA
TGGAAACCCATCCCCGCTTGATTTTGCCCAACTTCCTGCTAGAACCGACCTGAAACAGGT
GTTAGGAAAGGGAATTCCTTTTTTTCATGTGGAATTACCGGATGGCACGCGACTCCTGCA
TAGAATACAGCGCTTCTTCCCACTCCAATTCGGCCGCGAAGCCCTCTGTTCCGCACCACT
GCTCAACGCACCCAATCGTGTCGACTGGAGATCATGTGACATACCTCGTGATCAAGAAAG
TGAACACACAAAAAAGTTTCGAGAATTCTTCAAAAAGTTCGATGTTACAATGGCCGATGA
CGAATGACGATTTTATCTCGGTTTTATCGATTTTATCTTTTATCGTTTTATCCACCTTGT
CGGTATCACAAGCACGAATTTTAAACCAATCATCGTCTAGTATTTTGAATTAAACAGTTT
CCTCTAAAACTGTGCCTTGCGCTTTCGAAAGTAACAACCAATGACGTAATAATGAGTCAT
AAGTTGATTACTTAAGAAATTTCACCCAAAACTTGAACAAATTTGGAG

InterProScan

Gene3D	HIT-like_sf (IPR036265) - T[283-437] 6.0E-10
Pfam	Cwf19-like_C_dom-1 (IPR006768) - T[312-420] 2.6E-31
SUPERFAMILY	HIT-like_sf (IPR036265) - T[315-420] 6.99E-9
Pfam	Cwf19-like_C_dom-2 (IPR006767) - T[451-535] 2.8E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
C19L1_HUMAN	44.689 %	479	2.16E-165