- Transcript 'Cisavi.CG.ENS81.R122...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R122...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R122.277327-283215.03676.t
Possible name(s)
PRICKLE1; PRICKLE2; TES
Gene model
Location
R122 [277,874 / 282,038]
Amino acid sequence
Length: 418
>Cisavi.CG.ENS81.R122.277327-283215.03676.p
KLLYSMQKVLTHEVGAGAPCLKCGDKCPGLDLHFWRKICRNCKCKQEDHDVVASVSTRGI
DNIGKLLMQDREQFLHFQKNSKPKSQSQRSRNHLSNKQLHHSKSHRKTASRTTKSSSSSS
DDGEREYEWTPQASDPKLVDSYVSALPKDKQPIVGSAGAKYRKKQLMRQLPSHDQEPNEC
HDLTPQETTEMSLFVKQYREKALGVARVEENPKLKVTMFLRWSYYVITGVYLKQQSCAEC
RNPLDEGDAVVWAERAGSERYWHPGCFSCAECKELLVDLIYFYHDGKIYCGRHYCELHKP
RCAACDELIFAPEYTQAEDCYWHLKHFCCWHCDQPLGGKNYVPHDNQPVCIPCYEKTFAH
TCSTCSEIIAPNTEWVTFEEHHWHANSNCFKCTQCSQSLVGKPCIPKGSMVFCCSKCK
Nucleotide sequence
Length: 1,718
>Cisavi.CG.ENS81.R122.277327-283215.03676.t
AAACTGTTATATTCTATGCAGAAGGTCCTGACACACGAAGTTGGAGCTGGAGCTCCTTGT
TTAAAATGTGGCGATAAATGCCCAGGACTCGATTTGCATTTTTGGAGAAAGATCTGTCGA
AATTGCAAGTGCAAACAGGAAGATCATGACGTTGTGGCATCAGTCTCCACCCGCGGGATT
GATAACATTGGAAAGCTTCTTATGCAAGATCGCGAGCAATTCCTCCACTTCCAGAAGAAT
TCGAAACCAAAGTCACAGTCACAGAGAAGCAGAAATCACCTGTCAAACAAGCAACTCCAC
CACAGCAAGTCTCACAGAAAAACGGCTTCGAGAACAACGAAGAGTTCCTCCTCATCTAGT
GACGACGGGGAGCGAGAGTACGAGTGGACTCCCCAAGCATCGGATCCTAAACTGGTCGAC
AGCTACGTCAGCGCCCTCCCCAAGGACAAACAGCCGATTGTGGGCAGCGCTGGTGCAAAG
TACCGGAAGAAACAGTTAATGCGGCAACTTCCTTCCCATGATCAAGAACCGAATGAATGT
CACGATTTAACGCCACAAGAAACGACGGAAATGTCACTGTTCGTAAAACAATACAGGGAA
AAGGCATTGGGCGTGGCGAGGGTGGAAGAAAATCCCAAGCTAAAGGTAACAATGTTTTTG
CGTTGGTCGTATTATGTAATTACGGGTGTTTATTTAAAACAACAGTCGTGTGCCGAATGC
CGAAATCCTTTGGACGAAGGAGATGCGGTGGTTTGGGCGGAGCGTGCTGGATCGGAACGG
TACTGGCACCCTGGCTGTTTCAGTTGTGCTGAGTGCAAGGAACTGTTGGTTGATCTTATA
TATTTTTACCACGACGGCAAAATATACTGCGGTCGACACTACTGCGAACTGCACAAGCCC
CGATGTGCCGCTTGCGACGAGTTAATATTCGCTCCTGAATACACCCAAGCGGAGGACTGC
TACTGGCATCTCAAGCATTTCTGCTGCTGGCATTGCGACCAACCCCTTGGGGGCAAGAAC
TACGTTCCACACGACAACCAGCCAGTCTGTATTCCGTGTTATGAAAAGACTTTCGCCCAT
ACCTGCTCTACCTGTTCCGAGATAATCGCCCCAAACACTGAATGGGTTACTTTTGAAGAG
CACCACTGGCATGCGAACTCCAACTGCTTTAAATGTACCCAGTGCAGTCAATCGTTAGTC
GGGAAGCCATGTATCCCGAAAGGAAGCATGGTGTTCTGCTGCAGCAAATGCAAACGGGAA
AAAATACCTCCGACCCACTGATCAAATTGAATCAAACTTGTTTAGGCTGGATGTTTTAAT
TCAACGACAAATATACAGCGGCTACCGGTTTGCGGCAAACTAGTGGATTCTGCGATTCCA
GGTTTAATTCTGTCGGAGGGTAATATATTATCAGCTTGCTTGATTGTATATTTTGCAGTT
TTGCCAGGAGAATTTTTACTTCAGTATAAAAACATGAATTTTAATTTGGCGCACCATGTA
AATGAATTAATTGTCTAGACGCAATTTCTTTCCACAGCATTTTAAGCTAAATTAGCATCA
CTTTCGAAATCTATTCGCAAAAAAAACAGCATTTTGCAAGATTATTTATATGAACTATAA
AGTCATAATTGTTTCGACGTACAATCACTTCGTTTCGCAGCTTTTGCTGACTAACTTCTA
GTACAAACAATGTAAAATACACTAACGGAAAGTATAAA
| ProSiteProfiles |
PET_domain (IPR010442) - T[108-216] 33.14 |
| Pfam |
PET_domain (IPR010442) - T[126-208] 1.6E-34 |
| CDD |
PET_testin (IPR033724) - T[126-212] 3.41645E-42 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[235-300] 12.86 - T[301-360] 10.237 - T[361-418] 7.118 |
| SMART |
Znf_LIM (IPR001781) - T[236-293] 2.1E-11 - T[301-353] 1.0E-13 - T[361-416] 6.3E-11 |
| Pfam |
Znf_LIM (IPR001781) - T[237-297] 5.3E-11 - T[302-357] 2.1E-11 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[302-336] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 44.771 % | 269 | 2.18E-82 |
| PRIC3_HUMAN | 39.152 % | 276 | 6.1E-87 |
| TES_HUMAN | 44.811 % | 363 | 2.24E-123 |